RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 PMVKQ15126 192 aa8.24□□□□□ -1.09
SEC61A1-207ENST00000498837 MRPL18Q9H0U6 180 aaKnown RBP8.24□□□□□ -1.09
SEC61A1-207ENST00000498837 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
SEC61A1-207ENST00000498837 Q8NBF4 154 aa8.23□□□□□ -1.09
SEC61A1-207ENST00000498837 ZNF625Q96I27 306 aaPredicted RBP8.23□□□□□ -1.09
SEC61A1-207ENST00000498837 IGLV5-39A0A0G2JS06 123 aa8.22□□□□□ -1.09
SEC61A1-207ENST00000498837 LINC01546A6NGU7 62 aa8.22□□□□□ -1.09
SEC61A1-207ENST00000498837 H3BRM9 83 aa8.22□□□□□ -1.09
SEC61A1-207ENST00000498837 SEC61BP60468 96 aaKnown RBP8.22□□□□□ -1.09
SEC61A1-207ENST00000498837 S100PP25815 95 aa8.21□□□□□ -1.1
SEC61A1-207ENST00000498837 COX17Q14061 63 aa8.2□□□□□ -1.1
SEC61A1-207ENST00000498837 RHEBQ15382 184 aa8.2□□□□□ -1.1
SEC61A1-207ENST00000498837 LINC01549A6NIU2 74 aa8.19□□□□□ -1.1
SEC61A1-207ENST00000498837 IGLC3P0DOY3 106 aa8.19□□□□□ -1.1
SEC61A1-207ENST00000498837 RPS10P5Q9NQ39 176 aa8.19□□□□□ -1.1
SEC61A1-207ENST00000498837 SPINK1P00995 79 aa8.18□□□□□ -1.1
SEC61A1-207ENST00000498837 ZNF22P17026 224 aaPredicted RBP8.18□□□□□ -1.1
SEC61A1-207ENST00000498837 COX19Q49B96 90 aa8.18□□□□□ -1.1
SEC61A1-207ENST00000498837 ZNF706Q9Y5V0 76 aaPredicted RBP8.18□□□□□ -1.1
SEC61A1-207ENST00000498837 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
SEC61A1-207ENST00000498837 NDUFA6P56556 154 aa8.16□□□□□ -1.1
SEC61A1-207ENST00000498837 SMCR5Q8TEV8 140 aa8.16□□□□□ -1.1
SEC61A1-207ENST00000498837 FABP9Q0Z7S8 132 aa8.15□□□□□ -1.1
SEC61A1-207ENST00000498837 FA2HQ7L5A8 372 aa8.14□□□□□ -1.11
SEC61A1-207ENST00000498837 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
SEC61A1-207ENST00000498837 A0A096LNJ9 63 aa8.13□□□□□ -1.11
SEC61A1-207ENST00000498837 A0A0U1RRA0 63 aa8.13□□□□□ -1.11
SEC61A1-207ENST00000498837 LINC00158P58513 81 aa8.13□□□□□ -1.11
SEC61A1-207ENST00000498837 Q8N377 158 aa8.13□□□□□ -1.11
SEC61A1-207ENST00000498837 SMCO4Q9NRQ5 59 aa8.13□□□□□ -1.11
SEC61A1-207ENST00000498837 PRYO14603 147 aa8.12□□□□□ -1.11
SEC61A1-207ENST00000498837 APOC3P02656 99 aa8.12□□□□□ -1.11
SEC61A1-207ENST00000498837 XP32Q5T750 250 aa8.12□□□□□ -1.11
SEC61A1-207ENST00000498837 C11orf86A6NJI1 115 aa8.11□□□□□ -1.11
SEC61A1-207ENST00000498837 KRTAP4-16G5E9R7 235 aaPredicted RBP8.11□□□□□ -1.11
SEC61A1-207ENST00000498837 SPRR1AP35321 89 aa8.11□□□□□ -1.11
SEC61A1-207ENST00000498837 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
SEC61A1-207ENST00000498837 LINC00483Q53H64 154 aa8.11□□□□□ -1.11
SEC61A1-207ENST00000498837 C18orf32Q8TCD1 76 aa8.11□□□□□ -1.11
SEC61A1-207ENST00000498837 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
SEC61A1-207ENST00000498837 TRAPPC1Q9Y5R8 145 aa8.11□□□□□ -1.11
SEC61A1-207ENST00000498837 NCR3O14931 201 aa8.1□□□□□ -1.11
SEC61A1-207ENST00000498837 MOBPQ13875 183 aa8.1□□□□□ -1.11
SEC61A1-207ENST00000498837 TMEM170BQ5T4T1 132 aa8.1□□□□□ -1.11
SEC61A1-207ENST00000498837 GAGE2AQ6NT46 116 aa8.1□□□□□ -1.11
SEC61A1-207ENST00000498837 SVBPQ8N300 66 aa8.1□□□□□ -1.11
SEC61A1-207ENST00000498837 YPEL4Q96NS1 127 aa8.1□□□□□ -1.11
SEC61A1-207ENST00000498837 IGLV9-49A0A0B4J1Y8 123 aa8.09□□□□□ -1.11
SEC61A1-207ENST00000498837 ETDCA0A1B0GVM5 59 aa8.09□□□□□ -1.11
SEC61A1-207ENST00000498837 SNAPINO95295 136 aa8.09□□□□□ -1.11
SEC61A1-207ENST00000498837 SFTA2Q6UW10 78 aa8.09□□□□□ -1.11
SEC61A1-207ENST00000498837 FAM19A2Q8N3H0 131 aa8.09□□□□□ -1.11
SEC61A1-207ENST00000498837 KCNQ1DNQ9H478 68 aa8.09□□□□□ -1.11
SEC61A1-207ENST00000498837 LINC00614P0C842 121 aa8.08□□□□□ -1.12
SEC61A1-207ENST00000498837 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
SEC61A1-207ENST00000498837 MT1HP80294 61 aa8.08□□□□□ -1.12
SEC61A1-207ENST00000498837 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
SEC61A1-207ENST00000498837 SLC25A20O43772 301 aa8.07□□□□□ -1.12
SEC61A1-207ENST00000498837 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
SEC61A1-207ENST00000498837 SMIM13P0DJ93 91 aa8.07□□□□□ -1.12
SEC61A1-207ENST00000498837 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
SEC61A1-207ENST00000498837 BAGE3Q86Y29 109 aa8.07□□□□□ -1.12
SEC61A1-207ENST00000498837 TRBV10-3A0A0K0K1G6 114 aa8.06□□□□□ -1.12
SEC61A1-207ENST00000498837 PMCHL1Q16048 86 aa8.06□□□□□ -1.12
SEC61A1-207ENST00000498837 NDUFA5Q16718 116 aa8.06□□□□□ -1.12
SEC61A1-207ENST00000498837 HBDP02042 147 aa8.05□□□□□ -1.12
SEC61A1-207ENST00000498837 B5MCH6 92 aa8.04□□□□□ -1.12
SEC61A1-207ENST00000498837 ATP6V1G1O75348 118 aa8.04□□□□□ -1.12
SEC61A1-207ENST00000498837 MIR7-3HGQ8N6C7 128 aa8.03□□□□□ -1.12
SEC61A1-207ENST00000498837 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
SEC61A1-207ENST00000498837 Q9BRP9 147 aa8.02□□□□□ -1.13
SEC61A1-207ENST00000498837 CFC1BP0CG36 223 aa8.01□□□□□ -1.13
SEC61A1-207ENST00000498837 PCOTHQ58A44 107 aa8.01□□□□□ -1.13
SEC61A1-207ENST00000498837 MEIG1Q5JSS6 88 aa8.01□□□□□ -1.13
SEC61A1-207ENST00000498837 CHTOPQ9Y3Y2 248 aaKnown RBP8.01□□□□□ -1.13
SEC61A1-207ENST00000498837 LORP23490 312 aaPredicted RBP8□□□□□ -1.13
SEC61A1-207ENST00000498837 IGLV8-61A0A075B6I0 122 aa7.99□□□□□ -1.13
SEC61A1-207ENST00000498837 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
SEC61A1-207ENST00000498837 CHCHD1Q96BP2 118 aaKnown RBP7.98□□□□□ -1.13
SEC61A1-207ENST00000498837 S100A12P80511 92 aa7.97□□□□□ -1.13
SEC61A1-207ENST00000498837 C9orf153Q5TBE3 101 aa7.97□□□□□ -1.13
SEC61A1-207ENST00000498837 Q6ZRX8 168 aa7.97□□□□□ -1.13
SEC61A1-207ENST00000498837 DDTP30046 118 aa7.96□□□□□ -1.14
SEC61A1-207ENST00000498837 HERV-K104P63124 156 aa7.96□□□□□ -1.14
SEC61A1-207ENST00000498837 SLC7A5P1Q8MH63 180 aa7.96□□□□□ -1.14
SEC61A1-207ENST00000498837 TRAV12-1A0A0B4J245 112 aa7.95□□□□□ -1.14
SEC61A1-207ENST00000498837 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
SEC61A1-207ENST00000498837 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
SEC61A1-207ENST00000498837 TRGC2P03986 189 aa7.94□□□□□ -1.14
SEC61A1-207ENST00000498837 LINC00310P59036 64 aa7.94□□□□□ -1.14
SEC61A1-207ENST00000498837 LOC107984156A0A0G2JMH3 177 aa7.92□□□□□ -1.14
SEC61A1-207ENST00000498837 TRBV10-2A0A0K0K1G8 114 aa7.92□□□□□ -1.14
SEC61A1-207ENST00000498837 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
SEC61A1-207ENST00000498837 ARL17AQ8IVW1 177 aa7.92□□□□□ -1.14
SEC61A1-207ENST00000498837 ST20-AS1Q8NBB2 130 aa7.92□□□□□ -1.14
SEC61A1-207ENST00000498837 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
SEC61A1-207ENST00000498837 MYMXA0A1B0GTQ4 84 aa7.91□□□□□ -1.14
SEC61A1-207ENST00000498837 HSBP1O75506 76 aa7.91□□□□□ -1.14
SEC61A1-207ENST00000498837 FLGP20930 4061 aaPredicted RBP7.9□□□□□ -1.14
SEC61A1-207ENST00000498837 COLCA2A8K830 154 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms