RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 C18orf32Q8TCD1 76 aa6.43□□□□□ -1.38
LSAMP-206ENST00000498645 TRAPPC1Q9Y5R8 145 aa6.43□□□□□ -1.38
LSAMP-206ENST00000498645 M0R378 163 aa6.42□□□□□ -1.38
LSAMP-206ENST00000498645 Q8NDZ9 215 aa6.42□□□□□ -1.38
LSAMP-206ENST00000498645 URB1-AS1Q96HZ7 61 aa6.42□□□□□ -1.38
LSAMP-206ENST00000498645 A0A0U1RRA0 63 aa6.41□□□□□ -1.38
LSAMP-206ENST00000498645 COX17Q14061 63 aa6.41□□□□□ -1.38
LSAMP-206ENST00000498645 CBLN2Q8IUK8 224 aa6.41□□□□□ -1.38
LSAMP-206ENST00000498645 HIGD2AQ9BW72 106 aa6.41□□□□□ -1.38
LSAMP-206ENST00000498645 LINC00158P58513 81 aa6.4□□□□□ -1.38
LSAMP-206ENST00000498645 C10orf91Q5T1B1 145 aa6.39□□□□□ -1.39
LSAMP-206ENST00000498645 SFTA2Q6UW10 78 aa6.39□□□□□ -1.39
LSAMP-206ENST00000498645 C3orf22Q8N5N4 141 aa6.39□□□□□ -1.39
LSAMP-206ENST00000498645 CDIP1Q9H305 208 aa6.39□□□□□ -1.39
LSAMP-206ENST00000498645 CHTOPQ9Y3Y2 248 aaKnown RBP6.39□□□□□ -1.39
LSAMP-206ENST00000498645 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
LSAMP-206ENST00000498645 PLEKHB2Q96CS7 222 aa6.38□□□□□ -1.39
LSAMP-206ENST00000498645 ATP6V1G1O75348 118 aa6.37□□□□□ -1.39
LSAMP-206ENST00000498645 NCR3O14931 201 aa6.36□□□□□ -1.39
LSAMP-206ENST00000498645 APOC3P02656 99 aa6.36□□□□□ -1.39
LSAMP-206ENST00000498645 MEIG1Q5JSS6 88 aa6.36□□□□□ -1.39
LSAMP-206ENST00000498645 TMEM223A0PJW6 202 aa6.35□□□□□ -1.39
LSAMP-206ENST00000498645 SMIM13P0DJ93 91 aa6.35□□□□□ -1.39
LSAMP-206ENST00000498645 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
LSAMP-206ENST00000498645 BOD1L2Q8IYS8 172 aa6.35□□□□□ -1.39
LSAMP-206ENST00000498645 SPRR4Q96PI1 79 aa6.35□□□□□ -1.39
LSAMP-206ENST00000498645 FAT4Q6V0I7 4981 aa6.34□□□□□ -1.39
LSAMP-206ENST00000498645 IFI27L1Q96BM0 104 aa6.34□□□□□ -1.39
LSAMP-206ENST00000498645 H0Y8G0 127 aa6.33□□□□□ -1.4
LSAMP-206ENST00000498645 PRYO14603 147 aa6.33□□□□□ -1.4
LSAMP-206ENST00000498645 SNAPINO95295 136 aa6.33□□□□□ -1.4
LSAMP-206ENST00000498645 NDUFA5Q16718 116 aa6.33□□□□□ -1.4
LSAMP-206ENST00000498645 C4orf48Q5BLP8 95 aa6.33□□□□□ -1.4
LSAMP-206ENST00000498645 MIR7-3HGQ8N6C7 128 aa6.33□□□□□ -1.4
LSAMP-206ENST00000498645 PPDPFQ9H3Y8 114 aa6.33□□□□□ -1.4
LSAMP-206ENST00000498645 ZNF706Q9Y5V0 76 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-206ENST00000498645 TRAV12-1A0A0B4J245 112 aa6.32□□□□□ -1.4
LSAMP-206ENST00000498645 ETDCA0A1B0GVM5 59 aa6.32□□□□□ -1.4
LSAMP-206ENST00000498645 DAND5Q8N907 189 aa6.32□□□□□ -1.4
LSAMP-206ENST00000498645 CHCHD1Q96BP2 118 aaKnown RBP6.32□□□□□ -1.4
LSAMP-206ENST00000498645 SPAG11AQ6PDA7 123 aa6.31□□□□□ -1.4
LSAMP-206ENST00000498645 SVBPQ8N300 66 aa6.31□□□□□ -1.4
LSAMP-206ENST00000498645 Q8NBF4 154 aa6.31□□□□□ -1.4
LSAMP-206ENST00000498645 HERV-K104P63124 156 aa6.3□□□□□ -1.4
LSAMP-206ENST00000498645 CTAG1AP78358 180 aa6.3□□□□□ -1.4
LSAMP-206ENST00000498645 FAM19A2Q8N3H0 131 aa6.3□□□□□ -1.4
LSAMP-206ENST00000498645 SMCR5Q8TEV8 140 aa6.3□□□□□ -1.4
LSAMP-206ENST00000498645 NDUFA12Q9UI09 145 aa6.3□□□□□ -1.4
LSAMP-206ENST00000498645 TRBV10-3A0A0K0K1G6 114 aa6.29□□□□□ -1.4
LSAMP-206ENST00000498645 HSBP1O75506 76 aa6.29□□□□□ -1.4
LSAMP-206ENST00000498645 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
LSAMP-206ENST00000498645 LINC00337Q8N6G1 96 aa6.29□□□□□ -1.4
LSAMP-206ENST00000498645 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
LSAMP-206ENST00000498645 KCNQ1DNQ9H478 68 aa6.29□□□□□ -1.4
LSAMP-206ENST00000498645 MYMXA0A1B0GTQ4 84 aa6.28□□□□□ -1.4
LSAMP-206ENST00000498645 S100A12P80511 92 aa6.28□□□□□ -1.4
LSAMP-206ENST00000498645 GAGE2AQ6NT46 116 aa6.28□□□□□ -1.4
LSAMP-206ENST00000498645 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
LSAMP-206ENST00000498645 IGLV9-49A0A0B4J1Y8 123 aa6.27□□□□□ -1.41
LSAMP-206ENST00000498645 LINC00587B1AMM8 73 aa6.27□□□□□ -1.41
LSAMP-206ENST00000498645 SPRR1AP35321 89 aa6.27□□□□□ -1.41
LSAMP-206ENST00000498645 TSPEAR-AS2P59090 65 aa6.27□□□□□ -1.41
LSAMP-206ENST00000498645 FP248Q71RG6 208 aaPredicted RBP6.27□□□□□ -1.41
LSAMP-206ENST00000498645 YPEL4Q96NS1 127 aa6.27□□□□□ -1.41
LSAMP-206ENST00000498645 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
LSAMP-206ENST00000498645 MOBPQ13875 183 aa6.26□□□□□ -1.41
LSAMP-206ENST00000498645 B5MCH6 92 aa6.25□□□□□ -1.41
LSAMP-206ENST00000498645 DDTP30046 118 aa6.25□□□□□ -1.41
LSAMP-206ENST00000498645 MUC17Q685J3 4493 aa6.24□□□□□ -1.41
LSAMP-206ENST00000498645 LEPROTO15243 131 aa6.24□□□□□ -1.41
LSAMP-206ENST00000498645 ERC2-IT1O76042 136 aa6.24□□□□□ -1.41
LSAMP-206ENST00000498645 LEPROTL1O95214 131 aa6.24□□□□□ -1.41
LSAMP-206ENST00000498645 SPINK1P00995 79 aa6.24□□□□□ -1.41
LSAMP-206ENST00000498645 LINC00483Q53H64 154 aa6.24□□□□□ -1.41
LSAMP-206ENST00000498645 MIEN1Q9BRT3 115 aa6.24□□□□□ -1.41
LSAMP-206ENST00000498645 SERF1AO75920 110 aa6.23□□□□□ -1.41
LSAMP-206ENST00000498645 TRGC2P03986 189 aa6.23□□□□□ -1.41
LSAMP-206ENST00000498645 PLNP26678 52 aa6.23□□□□□ -1.41
LSAMP-206ENST00000498645 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
LSAMP-206ENST00000498645 PMCHL2Q9BQD1 86 aa6.23□□□□□ -1.41
LSAMP-206ENST00000498645 J3QQQ9 107 aa6.22□□□□□ -1.41
LSAMP-206ENST00000498645 FABP4P15090 132 aa6.22□□□□□ -1.41
LSAMP-206ENST00000498645 LGALS3P17931 250 aaKnown RBP6.22□□□□□ -1.41
LSAMP-206ENST00000498645 HERVK_113P61574 105 aa6.22□□□□□ -1.41
LSAMP-206ENST00000498645 NPC2P61916 151 aa6.22□□□□□ -1.41
LSAMP-206ENST00000498645 S100A7L2Q5SY68 101 aa6.22□□□□□ -1.41
LSAMP-206ENST00000498645 Q9BRP9 147 aa6.22□□□□□ -1.41
LSAMP-206ENST00000498645 SPANXB1Q9NS25 103 aaPredicted RBP6.22□□□□□ -1.41
LSAMP-206ENST00000498645 TRBV10-2A0A0K0K1G8 114 aa6.21□□□□□ -1.42
LSAMP-206ENST00000498645 DPM2O94777 84 aa6.21□□□□□ -1.42
LSAMP-206ENST00000498645 LINC00310P59036 64 aa6.21□□□□□ -1.42
LSAMP-206ENST00000498645 Q6ZRX8 168 aa6.21□□□□□ -1.42
LSAMP-206ENST00000498645 C9orf153Q5TBE3 101 aa6.2□□□□□ -1.42
LSAMP-206ENST00000498645 HSPB8Q9UJY1 196 aa6.2□□□□□ -1.42
LSAMP-206ENST00000498645 TRAV23DV6A0A075B6W5 121 aa6.19□□□□□ -1.42
LSAMP-206ENST00000498645 LOC107984156A0A0G2JMH3 177 aa6.19□□□□□ -1.42
LSAMP-206ENST00000498645 IGKCP01834 107 aa6.19□□□□□ -1.42
LSAMP-206ENST00000498645 NMUP48645 174 aa6.19□□□□□ -1.42
LSAMP-206ENST00000498645 ARL17AQ8IVW1 177 aa6.19□□□□□ -1.42
LSAMP-206ENST00000498645 IGLV6-57P01721 117 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms