RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 OR13C6PQ8NH95 151 aa4.63□□□□□ -1.67
GPATCH4-209ENST00000498641 LOC107984640A0A0U1RRK4 108 aa4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 A0A1W2PPM0 123 aa4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 NCR3O14931 201 aa4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 NDUFC2O95298 119 aa4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 SCGB1C2P0DMR2 95 aa4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 FABP2P12104 132 aa4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 CNBPP62633 177 aaKnown RBP4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 PRR3P79522 188 aaKnown RBP4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 GAGE2BQ13066 116 aa4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 Q6ZRP5 223 aa4.62□□□□□ -1.67
GPATCH4-209ENST00000498641 DYNC2H1Q8NCM8 4307 aaKnown RBP4.61□□□□□ -1.67
GPATCH4-209ENST00000498641 IGKV2-28A0A075B6P5 120 aa4.61□□□□□ -1.67
GPATCH4-209ENST00000498641 A0A087WTM6 91 aa4.61□□□□□ -1.67
GPATCH4-209ENST00000498641 IGKV2D-28P01615 120 aa4.61□□□□□ -1.67
GPATCH4-209ENST00000498641 TLX1NBP0CAT3 122 aa4.61□□□□□ -1.67
GPATCH4-209ENST00000498641 SMCPP49901 116 aaPredicted RBP4.61□□□□□ -1.67
GPATCH4-209ENST00000498641 S100A7L2Q5SY68 101 aa4.61□□□□□ -1.67
GPATCH4-209ENST00000498641 LINC00337Q8N6G1 96 aa4.61□□□□□ -1.67
GPATCH4-209ENST00000498641 Q8N814 137 aa4.61□□□□□ -1.67
GPATCH4-209ENST00000498641 GAGE10A6NGK3 116 aa4.6□□□□□ -1.67
GPATCH4-209ENST00000498641 COX6CP09669 75 aa4.6□□□□□ -1.67
GPATCH4-209ENST00000498641 C9orf129Q5T035 196 aaKnown RBP4.6□□□□□ -1.67
GPATCH4-209ENST00000498641 LYRM7Q5U5X0 104 aa4.6□□□□□ -1.67
GPATCH4-209ENST00000498641 PKIGQ9Y2B9 76 aa4.6□□□□□ -1.67
GPATCH4-209ENST00000498641 GTF2H5Q6ZYL4 71 aa4.59□□□□□ -1.67
GPATCH4-209ENST00000498641 NKAPP1Q8N9T2 125 aa4.59□□□□□ -1.67
GPATCH4-209ENST00000498641 Q8NDZ9 215 aa4.59□□□□□ -1.67
GPATCH4-209ENST00000498641 TMEM126AQ9H061 195 aa4.59□□□□□ -1.67
GPATCH4-209ENST00000498641 SPCS1Q9Y6A9 102 aa4.59□□□□□ -1.67
GPATCH4-209ENST00000498641 CSMD3Q7Z407 3707 aa4.59□□□□□ -1.68
GPATCH4-209ENST00000498641 TENM2Q9NT68 2774 aa4.59□□□□□ -1.68
GPATCH4-209ENST00000498641 STARD9Q9P2P6 4700 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 IGKV2-24A0A0C4DH68 120 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 TRBV10-2A0A0K0K1G8 114 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 LCE6AA0A183 80 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 C16orf90A8MZG2 172 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 M0R378 163 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 TRIAP1O43715 76 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 VPREB1P12018 145 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 C9orf163Q8N9P6 203 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 DPH3Q96FX2 82 aa4.58□□□□□ -1.68
GPATCH4-209ENST00000498641 DNAH7Q8WXX0 4024 aa4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 A0A096LNI7 61 aa4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 FAM168BA1KXE4 195 aa4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 K7EP34 96 aa4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 RTL8CO15255 209 aa4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 TNP2Q05952 138 aa4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 LINC01620Q4KN68 170 aa4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 FAM19A5Q7Z5A7 132 aaPredicted RBP4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 SMIM11BQ8TCY0 68 aa4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 PLA2G2DQ9UNK4 145 aa4.57□□□□□ -1.68
GPATCH4-209ENST00000498641 TRBV20-1A0A075B6N2 111 aa4.56□□□□□ -1.68
GPATCH4-209ENST00000498641 IGLV5-52A0A0A0MRZ9 124 aa4.56□□□□□ -1.68
GPATCH4-209ENST00000498641 TRBV10-3A0A0K0K1G6 114 aa4.56□□□□□ -1.68
GPATCH4-209ENST00000498641 RPL28P46779 137 aaKnown RBP4.56□□□□□ -1.68
GPATCH4-209ENST00000498641 UBE2V1Q13404 147 aa4.56□□□□□ -1.68
GPATCH4-209ENST00000498641 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
GPATCH4-209ENST00000498641 SERTAD4-AS1Q5TG53 156 aa4.56□□□□□ -1.68
GPATCH4-209ENST00000498641 SDIM1Q6ZPB5 146 aa4.56□□□□□ -1.68
GPATCH4-209ENST00000498641 LINC00474Q9P2X8 69 aa4.56□□□□□ -1.68
GPATCH4-209ENST00000498641 TCL1BO95988 128 aa4.55□□□□□ -1.68
GPATCH4-209ENST00000498641 IGLV6-57P01721 117 aa4.55□□□□□ -1.68
GPATCH4-209ENST00000498641 FUSP35637 526 aaKnown RBP eCLIP4.55□□□□□ -1.68
GPATCH4-209ENST00000498641 ATXN8Q156A1 80 aa4.55□□□□□ -1.68
GPATCH4-209ENST00000498641 C7orf33Q8WU49 177 aa4.55□□□□□ -1.68
GPATCH4-209ENST00000498641 CLEC2BQ92478 149 aa4.55□□□□□ -1.68
GPATCH4-209ENST00000498641 CBY1Q9Y3M2 126 aa4.55□□□□□ -1.68
GPATCH4-209ENST00000498641 C22orf24Q9Y442 160 aa4.55□□□□□ -1.68
GPATCH4-209ENST00000498641 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
GPATCH4-209ENST00000498641 IGLV5-37A0A075B6J1 123 aa4.54□□□□□ -1.68
GPATCH4-209ENST00000498641 TRAV23DV6A0A075B6W5 121 aa4.54□□□□□ -1.68
GPATCH4-209ENST00000498641 H0YGX0 51 aa4.54□□□□□ -1.68
GPATCH4-209ENST00000498641 H3BMG7 143 aa4.54□□□□□ -1.68
GPATCH4-209ENST00000498641 CHTF8P0CG12 524 aa4.54□□□□□ -1.68
GPATCH4-209ENST00000498641 A0A1W2PNN7 141 aa4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 RPL37AP8A6NKH3 93 aa4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 J3QL48 77 aa4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 M0QXV9 152 aa4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 SNCGO76070 127 aa4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 C6orf99Q4VX62 202 aa4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 MRPL55Q7Z7F7 128 aaKnown RBP4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 LINC00167Q96N53 147 aa4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 VPS13DQ5THJ4 4388 aa4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 LYSTQ99698 3801 aa4.53□□□□□ -1.68
GPATCH4-209ENST00000498641 LST1O00453 97 aa4.52□□□□□ -1.69
GPATCH4-209ENST00000498641 ZNF73O43830 326 aaPredicted RBP4.52□□□□□ -1.69
GPATCH4-209ENST00000498641 KRTAP7-1Q8IUC3 87 aa4.52□□□□□ -1.69
GPATCH4-209ENST00000498641 DIRC1Q969H9 104 aa4.52□□□□□ -1.69
GPATCH4-209ENST00000498641 IGLV1-50A0A075B6I6 118 aa4.51□□□□□ -1.69
GPATCH4-209ENST00000498641 C9JAW5 83 aa4.51□□□□□ -1.69
GPATCH4-209ENST00000498641 COX7BP24311 80 aa4.51□□□□□ -1.69
GPATCH4-209ENST00000498641 KRTAP10-2P60368 255 aa4.51□□□□□ -1.69
GPATCH4-209ENST00000498641 KCNQ1DNQ9H478 68 aa4.51□□□□□ -1.69
GPATCH4-209ENST00000498641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.51□□□□□ -1.69
GPATCH4-209ENST00000498641 A0A087WYN8 130 aa4.5□□□□□ -1.69
GPATCH4-209ENST00000498641 TRBV7-6A0A0J9YX20 115 aa4.5□□□□□ -1.69
GPATCH4-209ENST00000498641 F8W1H4 67 aa4.5□□□□□ -1.69
GPATCH4-209ENST00000498641 PANO1I0J062 215 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms