RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 Q8N3U1 123 aa11.2□□□□□ -0.62
COL6A1-206ENST00000498614 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
COL6A1-206ENST00000498614 IGHV4-28A0A0C4DH34 117 aa11.2□□□□□ -0.62
COL6A1-206ENST00000498614 ANK2Q01484 3957 aa11.2□□□□□ -0.62
COL6A1-206ENST00000498614 JMJD7-PLA2G4BH0Y9G9 81 aa11.19□□□□□ -0.62
COL6A1-206ENST00000498614 FAM19A5Q7Z5A7 132 aaPredicted RBP11.19□□□□□ -0.62
COL6A1-206ENST00000498614 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
COL6A1-206ENST00000498614 KIAA0087Q14695 138 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 TMEM256-PLSCR3K7ERE1 68 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 DAD1P61803 113 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 C9orf116Q5BN46 136 aaPredicted RBP11.18□□□□□ -0.62
COL6A1-206ENST00000498614 Q8NDZ9 215 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 CELA1Q9UNI1 258 aa11.18□□□□□ -0.62
COL6A1-206ENST00000498614 APOC4P55056 127 aa11.17□□□□□ -0.62
COL6A1-206ENST00000498614 IGLV10-54A0A075B6I4 117 aa11.17□□□□□ -0.62
COL6A1-206ENST00000498614 RPS28P62857 69 aaKnown RBP11.17□□□□□ -0.62
COL6A1-206ENST00000498614 NDUFC2O95298 119 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 TMEM258P61165 79 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 FAM19A1Q7Z5A9 133 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 S100A7L2Q5SY68 101 aa11.16□□□□□ -0.62
COL6A1-206ENST00000498614 ANGP03950 147 aaKnown RBP11.15□□□□□ -0.62
COL6A1-206ENST00000498614 C6orf99Q4VX62 202 aa11.15□□□□□ -0.62
COL6A1-206ENST00000498614 TRAV23DV6A0A075B6W5 121 aa11.14□□□□□ -0.63
COL6A1-206ENST00000498614 ENHOQ6UWT2 76 aa11.14□□□□□ -0.63
COL6A1-206ENST00000498614 DPH3Q96FX2 82 aa11.14□□□□□ -0.63
COL6A1-206ENST00000498614 HTN3P15516 51 aa11.14□□□□□ -0.63
COL6A1-206ENST00000498614 CHCHD10Q8WYQ3 142 aaPredicted RBP11.14□□□□□ -0.63
COL6A1-206ENST00000498614 Q8NAQ8 132 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 GHRHP01286 108 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 COX17Q14061 63 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 ATP5EP2Q5VTU8 51 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 CD164L2Q6UWJ8 174 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 LYPD5Q6UWN5 251 aa11.13□□□□□ -0.63
COL6A1-206ENST00000498614 REG3AQ06141 175 aa11.12□□□□□ -0.63
COL6A1-206ENST00000498614 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
COL6A1-206ENST00000498614 NOTCH1P46531 2555 aa11.11□□□□□ -0.63
COL6A1-206ENST00000498614 OXTP01178 125 aa11.11□□□□□ -0.63
COL6A1-206ENST00000498614 LINC00575Q6W349 94 aa11.1□□□□□ -0.63
COL6A1-206ENST00000498614 MIFP14174 115 aa11.1□□□□□ -0.63
COL6A1-206ENST00000498614 UBL5Q9BZL1 73 aa11.1□□□□□ -0.63
COL6A1-206ENST00000498614 DNHD1Q96M86 4753 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 IGHV4-30-4P0DP06 118 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 SPART-AS1P0CW21 52 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 C10orf25Q5T742 122 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 Q6ZQT0 140 aa11.08□□□□□ -0.64
COL6A1-206ENST00000498614 MGAM2Q2M2H8 2515 aa11.07□□□□□ -0.64
COL6A1-206ENST00000498614 M0R2N4 97 aa11.07□□□□□ -0.64
COL6A1-206ENST00000498614 C6orf223Q8N319 242 aa11.07□□□□□ -0.64
COL6A1-206ENST00000498614 RBM3P98179 157 aaKnown RBP11.06□□□□□ -0.64
COL6A1-206ENST00000498614 NBEAL1Q6ZS30 2694 aa11.05□□□□□ -0.64
COL6A1-206ENST00000498614 TRBV10-3A0A0K0K1G6 114 aa11.05□□□□□ -0.64
COL6A1-206ENST00000498614 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
COL6A1-206ENST00000498614 ZNF561-AS1K7EIQ3 104 aa11.05□□□□□ -0.64
COL6A1-206ENST00000498614 KRTAP10-11P60412 298 aa11.04□□□□□ -0.64
COL6A1-206ENST00000498614 LAMTOR3Q9UHA4 124 aa11.04□□□□□ -0.64
COL6A1-206ENST00000498614 C5orf47Q569G3 176 aa11.04□□□□□ -0.64
COL6A1-206ENST00000498614 LELP1Q5T871 98 aa11.04□□□□□ -0.64
COL6A1-206ENST00000498614 LOC110117498A0A087WWA1 95 aa11.03□□□□□ -0.64
COL6A1-206ENST00000498614 C20orf197Q8N268 126 aa11.03□□□□□ -0.64
COL6A1-206ENST00000498614 KLK12Q9UKR0 248 aa11.03□□□□□ -0.64
COL6A1-206ENST00000498614 SPAG11BQ08648 103 aa11.02□□□□□ -0.65
COL6A1-206ENST00000498614 PRB2P02812 416 aaPredicted RBP11.01□□□□□ -0.65
COL6A1-206ENST00000498614 IGLV6-57P01721 117 aa11.01□□□□□ -0.65
COL6A1-206ENST00000498614 LINC01547P58512 204 aaPredicted RBP11□□□□□ -0.65
COL6A1-206ENST00000498614 Q6ZQY7 126 aa11□□□□□ -0.65
COL6A1-206ENST00000498614 WIPF1O43516 503 aa10.99□□□□□ -0.65
COL6A1-206ENST00000498614 Q6ZVQ6 151 aa10.99□□□□□ -0.65
COL6A1-206ENST00000498614 HAMPP81172 84 aa10.98□□□□□ -0.65
COL6A1-206ENST00000498614 RETNQ9HD89 108 aa10.98□□□□□ -0.65
COL6A1-206ENST00000498614 NDUFC2-KCTD14E9PQ53 114 aa10.98□□□□□ -0.65
COL6A1-206ENST00000498614 DNAH3Q8TD57 4116 aa10.98□□□□□ -0.65
COL6A1-206ENST00000498614 A0A0J9YWU9 116 aa10.97□□□□□ -0.65
COL6A1-206ENST00000498614 PRR34Q9NV39 138 aa10.97□□□□□ -0.65
COL6A1-206ENST00000498614 TRAV10A0A0B4J240 114 aa10.96□□□□□ -0.66
COL6A1-206ENST00000498614 C4orf26Q17RF5 130 aa10.96□□□□□ -0.66
COL6A1-206ENST00000498614 Q5XG85 94 aa10.95□□□□□ -0.66
COL6A1-206ENST00000498614 TRAV7A0A075B6U4 112 aa10.95□□□□□ -0.66
COL6A1-206ENST00000498614 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
COL6A1-206ENST00000498614 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
COL6A1-206ENST00000498614 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
COL6A1-206ENST00000498614 FAM236DA0A1B0GTK5 79 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 FAM236CP0DP71 79 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 H7BZZ5 65 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 BCE1O60756 84 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 WFDC10BQ8IUB3 73 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 C6orf48Q9UBA6 75 aa10.92□□□□□ -0.66
COL6A1-206ENST00000498614 DIRC1Q969H9 104 aa10.91□□□□□ -0.66
COL6A1-206ENST00000498614 PDE6GP18545 87 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 KPRPQ5T749 579 aaPredicted RBP10.9□□□□□ -0.66
COL6A1-206ENST00000498614 CXCL6P80162 114 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 HRCT1Q6UXD1 115 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 Q6ZTC4 211 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 SCXQ7RTU7 201 aa10.9□□□□□ -0.66
COL6A1-206ENST00000498614 GVQW2A0A096LPI5 108 aaPredicted RBP10.89□□□□□ -0.67
COL6A1-206ENST00000498614 SNURFQ9Y675 71 aa10.89□□□□□ -0.67
COL6A1-206ENST00000498614 TRBV7-4A0A0J9YYF1 115 aa10.88□□□□□ -0.67
COL6A1-206ENST00000498614 ZNF73O43830 326 aaPredicted RBP10.88□□□□□ -0.67
COL6A1-206ENST00000498614 H3BQ85 93 aa10.88□□□□□ -0.67
COL6A1-206ENST00000498614 COX7BP24311 80 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms