RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 MEIG1Q5JSS6 88 aa7.81□□□□□ -1.16
HSPG2-213ENST00000498495 PMCHL2Q9BQD1 86 aa7.81□□□□□ -1.16
HSPG2-213ENST00000498495 IGLV5-37A0A075B6J1 123 aa7.8□□□□□ -1.16
HSPG2-213ENST00000498495 MYMXA0A1B0GTQ4 84 aa7.8□□□□□ -1.16
HSPG2-213ENST00000498495 GAGE10A6NGK3 116 aa7.8□□□□□ -1.16
HSPG2-213ENST00000498495 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
HSPG2-213ENST00000498495 LINC00587B1AMM8 73 aa7.8□□□□□ -1.16
HSPG2-213ENST00000498495 LEPROTO15243 131 aa7.8□□□□□ -1.16
HSPG2-213ENST00000498495 HERVK_113P61574 105 aa7.8□□□□□ -1.16
HSPG2-213ENST00000498495 HERV-K104P63124 156 aa7.8□□□□□ -1.16
HSPG2-213ENST00000498495 NDUFA12Q9UI09 145 aa7.8□□□□□ -1.16
HSPG2-213ENST00000498495 SMIM13P0DJ93 91 aa7.79□□□□□ -1.16
HSPG2-213ENST00000498495 S100A1P23297 94 aa7.79□□□□□ -1.16
HSPG2-213ENST00000498495 PLEKHB2Q96CS7 222 aa7.79□□□□□ -1.16
HSPG2-213ENST00000498495 H0Y9J4 135 aa7.78□□□□□ -1.16
HSPG2-213ENST00000498495 SYS1-DBNDD2H3BUS1 97 aa7.78□□□□□ -1.16
HSPG2-213ENST00000498495 ZNF861PO60384 105 aa7.78□□□□□ -1.16
HSPG2-213ENST00000498495 HERC1Q15751 4861 aa7.78□□□□□ -1.16
HSPG2-213ENST00000498495 VPREB1P12018 145 aa7.77□□□□□ -1.17
HSPG2-213ENST00000498495 J3QQQ9 107 aa7.76□□□□□ -1.17
HSPG2-213ENST00000498495 BCE1O60756 84 aa7.76□□□□□ -1.17
HSPG2-213ENST00000498495 LGALS3P17931 250 aaKnown RBP7.76□□□□□ -1.17
HSPG2-213ENST00000498495 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
HSPG2-213ENST00000498495 COA6Q5JTJ3 125 aaKnown RBP7.76□□□□□ -1.17
HSPG2-213ENST00000498495 IGKV2-28A0A075B6P5 120 aa7.75□□□□□ -1.17
HSPG2-213ENST00000498495 IGKV2D-28P01615 120 aa7.75□□□□□ -1.17
HSPG2-213ENST00000498495 TSPEAR-AS2P59090 65 aa7.75□□□□□ -1.17
HSPG2-213ENST00000498495 PET117Q6UWS5 81 aa7.75□□□□□ -1.17
HSPG2-213ENST00000498495 MIR7-3HGQ8N6C7 128 aa7.75□□□□□ -1.17
HSPG2-213ENST00000498495 IGLV1-50A0A075B6I6 118 aa7.74□□□□□ -1.17
HSPG2-213ENST00000498495 RPL28P46779 137 aaKnown RBP7.74□□□□□ -1.17
HSPG2-213ENST00000498495 NMUP48645 174 aa7.74□□□□□ -1.17
HSPG2-213ENST00000498495 LINC01545Q5VT33 79 aa7.73□□□□□ -1.17
HSPG2-213ENST00000498495 BOD1L2Q8IYS8 172 aa7.73□□□□□ -1.17
HSPG2-213ENST00000498495 E9PLD3 99 aa7.72□□□□□ -1.17
HSPG2-213ENST00000498495 C3orf79P0CE67 100 aa7.72□□□□□ -1.17
HSPG2-213ENST00000498495 UBE2AP49459 152 aa7.72□□□□□ -1.17
HSPG2-213ENST00000498495 Q8NDZ9 215 aa7.72□□□□□ -1.17
HSPG2-213ENST00000498495 M0R378 163 aa7.71□□□□□ -1.18
HSPG2-213ENST00000498495 KRTDAPP60985 99 aa7.71□□□□□ -1.18
HSPG2-213ENST00000498495 PRR26Q8N8Z3 221 aa7.71□□□□□ -1.18
HSPG2-213ENST00000498495 DAND5Q8N907 189 aa7.7□□□□□ -1.18
HSPG2-213ENST00000498495 TMEM126AQ9H061 195 aa7.7□□□□□ -1.18
HSPG2-213ENST00000498495 TMEM238C9JI98 176 aa7.69□□□□□ -1.18
HSPG2-213ENST00000498495 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
HSPG2-213ENST00000498495 FAM19A1Q7Z5A9 133 aa7.69□□□□□ -1.18
HSPG2-213ENST00000498495 IGKV2D-26A0A0A0MRZ7 120 aa7.68□□□□□ -1.18
HSPG2-213ENST00000498495 A0A0J9YXY3 114 aa7.68□□□□□ -1.18
HSPG2-213ENST00000498495 C20orf202A1L168 122 aa7.68□□□□□ -1.18
HSPG2-213ENST00000498495 MIEN1Q9BRT3 115 aa7.68□□□□□ -1.18
HSPG2-213ENST00000498495 LOC107984156A0A0G2JMH3 177 aa7.67□□□□□ -1.18
HSPG2-213ENST00000498495 NCR3O14931 201 aa7.67□□□□□ -1.18
HSPG2-213ENST00000498495 ARL17AQ8IVW1 177 aa7.67□□□□□ -1.18
HSPG2-213ENST00000498495 TNXBP22105 4242 aa7.66□□□□□ -1.18
HSPG2-213ENST00000498495 PRLHP81277 87 aa7.66□□□□□ -1.18
HSPG2-213ENST00000498495 KRTAP13-1Q8IUC0 172 aa7.66□□□□□ -1.18
HSPG2-213ENST00000498495 S100A2P29034 98 aa7.65□□□□□ -1.18
HSPG2-213ENST00000498495 RPL13AP40429 203 aaKnown RBP7.65□□□□□ -1.18
HSPG2-213ENST00000498495 S100A12P80511 92 aa7.65□□□□□ -1.18
HSPG2-213ENST00000498495 S100A6P06703 90 aa7.64□□□□□ -1.19
HSPG2-213ENST00000498495 AKR1D1P51857 326 aa7.64□□□□□ -1.19
HSPG2-213ENST00000498495 NPC2P61916 151 aa7.64□□□□□ -1.19
HSPG2-213ENST00000498495 ADAMTSL4-AS1Q5T5F5 129 aa7.64□□□□□ -1.19
HSPG2-213ENST00000498495 TRBV10-3A0A0K0K1G6 114 aa7.63□□□□□ -1.19
HSPG2-213ENST00000498495 TRBV10-2A0A0K0K1G8 114 aa7.63□□□□□ -1.19
HSPG2-213ENST00000498495 ZNF815PA8K554 130 aa7.63□□□□□ -1.19
HSPG2-213ENST00000498495 PRYO14603 147 aa7.63□□□□□ -1.19
HSPG2-213ENST00000498495 KCNQ1DNQ9H478 68 aa7.63□□□□□ -1.19
HSPG2-213ENST00000498495 NDUFC2O95298 119 aa7.62□□□□□ -1.19
HSPG2-213ENST00000498495 CRYGAP11844 174 aa7.62□□□□□ -1.19
HSPG2-213ENST00000498495 HIST3H2BBQ8N257 126 aa7.62□□□□□ -1.19
HSPG2-213ENST00000498495 TIMM17BO60830 172 aa7.61□□□□□ -1.19
HSPG2-213ENST00000498495 DDTP30046 118 aa7.61□□□□□ -1.19
HSPG2-213ENST00000498495 S100A7L2Q5SY68 101 aa7.61□□□□□ -1.19
HSPG2-213ENST00000498495 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
HSPG2-213ENST00000498495 ATOH7Q8N100 152 aa7.61□□□□□ -1.19
HSPG2-213ENST00000498495 HIGD2AQ9BW72 106 aa7.61□□□□□ -1.19
HSPG2-213ENST00000498495 TTTY13Q9BZ97 58 aa7.61□□□□□ -1.19
HSPG2-213ENST00000498495 SPANXB1Q9NS25 103 aaPredicted RBP7.61□□□□□ -1.19
HSPG2-213ENST00000498495 ANAPC11Q9NYG5 84 aa7.61□□□□□ -1.19
HSPG2-213ENST00000498495 ETDCA0A1B0GVM5 59 aa7.6□□□□□ -1.19
HSPG2-213ENST00000498495 SPRR1AP35321 89 aa7.6□□□□□ -1.19
HSPG2-213ENST00000498495 LINC00337Q8N6G1 96 aa7.6□□□□□ -1.19
HSPG2-213ENST00000498495 HIST1H2BLQ99880 126 aa7.6□□□□□ -1.19
HSPG2-213ENST00000498495 A0A087X002 238 aa7.59□□□□□ -1.19
HSPG2-213ENST00000498495 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
HSPG2-213ENST00000498495 ANKRD39Q53RE8 183 aa7.59□□□□□ -1.19
HSPG2-213ENST00000498495 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.19
HSPG2-213ENST00000498495 LINC00308Q8TCZ7 52 aa7.59□□□□□ -1.19
HSPG2-213ENST00000498495 LITAFQ99732 161 aa7.59□□□□□ -1.19
HSPG2-213ENST00000498495 SNRPEP62304 92 aaKnown RBP7.58□□□□□ -1.2
HSPG2-213ENST00000498495 FAM229BQ4G0N7 80 aa7.58□□□□□ -1.2
HSPG2-213ENST00000498495 TYMSOSQ8TAI1 123 aa7.58□□□□□ -1.2
HSPG2-213ENST00000498495 SPANXCQ9NY87 97 aa7.57□□□□□ -1.2
HSPG2-213ENST00000498495 KRTAP4-16G5E9R7 235 aaPredicted RBP7.56□□□□□ -1.2
HSPG2-213ENST00000498495 IGLV6-57P01721 117 aa7.56□□□□□ -1.2
HSPG2-213ENST00000498495 SMCR5Q8TEV8 140 aa7.56□□□□□ -1.2
HSPG2-213ENST00000498495 PCP2Q8IVA1 136 aa7.55□□□□□ -1.2
HSPG2-213ENST00000498495 OR13C6PQ8NH95 151 aa7.55□□□□□ -1.2
HSPG2-213ENST00000498495 CBY1Q9Y3M2 126 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms