RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CDAP32320 146 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 LCE1EQ5T753 118 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 ST20-AS1Q8NBB2 130 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 ANAPC11Q9NYG5 84 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 HSPG2P98160 4391 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 SYNE2Q8WXH0 6885 aaKnown RBP0.85□□□□□ -2.27
XRN1-214ENST00000498077 K7EMI3 77 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 MIR22HGQ0VDD5 57 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 EIF4EBP1Q13541 118 aaPredicted RBP0.85□□□□□ -2.27
XRN1-214ENST00000498077 UFSP1Q6NVU6 142 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 BPESC1Q9GZL8 116 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 C10orf142B7Z368 130 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 SMIM13P0DJ93 91 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 GNG10P50151 68 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 TSPAN5P62079 268 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 C10orf99Q6UWK7 81 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 C9orf163Q8N9P6 203 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 ZFC3H1O60293 1989 aaKnown RBP0.85□□□□□ -2.27
XRN1-214ENST00000498077 PKHD1L1Q86WI1 4243 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 MYH10P35580 1976 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 TRBV19A0A075B6N1 114 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 A0A087X002 238 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 TRBV6-1A0A0K0K1D8 114 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 ETDCA0A1B0GVM5 59 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 MIFP14174 115 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 NOTCH2NLQ7Z3S9 236 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 URB1-AS1Q96HZ7 61 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 USMG5Q96IX5 58 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 R4GN34 69 aa0.85□□□□□ -2.27
XRN1-214ENST00000498077 IGHV3OR16-10A0A075B7F0 116 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 COX5BP10606 129 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 DNM1P34Q6PK57 102 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 LINC00299Q6ZSB3 139 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 DIRC1Q969H9 104 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 S4R3F8 94 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 HUWE1Q7Z6Z7 4374 aaKnown RBP0.84□□□□□ -2.27
XRN1-214ENST00000498077 BOD1L1Q8NFC6 3051 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 EFNA4P52798 201 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 ATP5J2P56134 94 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 OTOSQ8NHW6 89 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 MDN1Q9NU22 5596 aa0.84□□□□□ -2.27
XRN1-214ENST00000498077 NREPQ16612 68 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 MIAQ16674 131 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 ETDBQ3ZM63 59 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 C6orf226Q5I0X4 101 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 LCN9Q8WX39 176 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 DMAC1Q96GE9 116 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 SPXQ9BT56 116 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 IAPPP10997 89 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 PCLAFQ15004 111 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 NKAIN1Q4KMZ8 207 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 APCDD1LQ8NCL9 501 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 DYNLRB1Q9NP97 96 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 HILPDAQ9Y5L2 63 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 MPC1Q9Y5U8 109 aa0.84□□□□□ -2.28
XRN1-214ENST00000498077 HELZP42694 1942 aaKnown RBP0.84□□□□□ -2.28
XRN1-214ENST00000498077 GNG14A0A1W2PPG7 69 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 RHOHQ15669 191 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 COX8CQ7Z4L0 72 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 TMEM190Q8WZ59 177 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 UBL5Q9BZL1 73 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 JPT1Q9UK76 154 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3-35A0A0C4DH35 117 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 A0A1W2PPE3 182 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 NKX6-3A6NJ46 265 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 PLGLB1Q02325 96 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 HIST1H1AQ02539 215 aaPredicted RBP0.83□□□□□ -2.28
XRN1-214ENST00000498077 Q6ZR03 302 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 TMEM14BQ9NUH8 114 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 IGLV10-54A0A075B6I4 117 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 A0A0U1RQV5 110 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 FAM223BA6NKX1 122 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 ATP6V1G2-DDX39BF2Z307 99 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 K7EIL1 84 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 CCL16O15467 120 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 ATP5IP56385 69 aaPredicted RBP0.83□□□□□ -2.28
XRN1-214ENST00000498077 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 NIPSNAP3BQ9BS92 247 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 NXT1Q9UKK6 140 aaKnown RBP0.83□□□□□ -2.28
XRN1-214ENST00000498077 STARD9Q9P2P6 4700 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 OOSP1A8MZH6 123 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 Q6ZTI0 123 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 SMIM29Q86T20 159 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 C11orf52Q96A22 123 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 LAMTOR2Q9Y2Q5 125 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 IGLV1-50A0A075B6I6 118 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3-21A0A0B4J1V1 117 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 A0A0J9YY99 117 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 RAMP3O60896 148 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 C8GP07360 202 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 UBE2HP62256 183 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 MRPS36P82909 103 aaKnown RBP0.83□□□□□ -2.28
XRN1-214ENST00000498077 ZCCHC13Q8WW36 166 aaKnown RBP0.83□□□□□ -2.28
XRN1-214ENST00000498077 TXLNGYQ9BZA5 131 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 CBLN4Q9NTU7 201 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 PRNDQ9UKY0 176 aa0.83□□□□□ -2.28
XRN1-214ENST00000498077 NAA20P61599 178 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 TFF3Q07654 80 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 PABPC1L2AQ5JQF8 200 aa0.82□□□□□ -2.28
XRN1-214ENST00000498077 NPBQ8NG41 125 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms