RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 MEIG1Q5JSS6 88 aa7.23□□□□□ -1.25
MRPL55-234ENST00000497758 COA6Q5JTJ3 125 aaKnown RBP7.23□□□□□ -1.25
MRPL55-234ENST00000497758 LINC00587B1AMM8 73 aa7.22□□□□□ -1.25
MRPL55-234ENST00000497758 REG3GQ6UW15 175 aa7.22□□□□□ -1.25
MRPL55-234ENST00000497758 PET117Q6UWS5 81 aa7.22□□□□□ -1.25
MRPL55-234ENST00000497758 KRTAP11-1Q8IUC1 163 aa7.22□□□□□ -1.25
MRPL55-234ENST00000497758 A0A0U1RRA0 63 aa7.21□□□□□ -1.26
MRPL55-234ENST00000497758 GAGE10A6NGK3 116 aa7.21□□□□□ -1.26
MRPL55-234ENST00000497758 J3QQQ9 107 aa7.21□□□□□ -1.26
MRPL55-234ENST00000497758 IGLV7-43P04211 117 aa7.21□□□□□ -1.26
MRPL55-234ENST00000497758 LGALS3P17931 250 aaKnown RBP7.21□□□□□ -1.26
MRPL55-234ENST00000497758 RPL24P83731 157 aaKnown RBP7.21□□□□□ -1.26
MRPL55-234ENST00000497758 SRSF9Q13242 221 aaKnown RBP eCLIP7.21□□□□□ -1.26
MRPL55-234ENST00000497758 IGLV5-37A0A075B6J1 123 aa7.2□□□□□ -1.26
MRPL55-234ENST00000497758 RPL37AP8A6NKH3 93 aa7.2□□□□□ -1.26
MRPL55-234ENST00000497758 SMIM13P0DJ93 91 aa7.2□□□□□ -1.26
MRPL55-234ENST00000497758 TSPEAR-AS2P59090 65 aa7.2□□□□□ -1.26
MRPL55-234ENST00000497758 KRTDAPP60985 99 aa7.2□□□□□ -1.26
MRPL55-234ENST00000497758 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
MRPL55-234ENST00000497758 NMUP48645 174 aa7.19□□□□□ -1.26
MRPL55-234ENST00000497758 LINC01545Q5VT33 79 aa7.19□□□□□ -1.26
MRPL55-234ENST00000497758 DIRC1Q969H9 104 aa7.19□□□□□ -1.26
MRPL55-234ENST00000497758 LINC00167Q96N53 147 aa7.19□□□□□ -1.26
MRPL55-234ENST00000497758 C20orf202A1L168 122 aa7.18□□□□□ -1.26
MRPL55-234ENST00000497758 VPREB1P12018 145 aa7.18□□□□□ -1.26
MRPL55-234ENST00000497758 MIR7-3HGQ8N6C7 128 aa7.18□□□□□ -1.26
MRPL55-234ENST00000497758 E9PLD3 99 aa7.17□□□□□ -1.26
MRPL55-234ENST00000497758 IGKV2-28A0A075B6P5 120 aa7.16□□□□□ -1.26
MRPL55-234ENST00000497758 IGKV2D-28P01615 120 aa7.16□□□□□ -1.26
MRPL55-234ENST00000497758 S100A2P29034 98 aa7.16□□□□□ -1.26
MRPL55-234ENST00000497758 BOD1L2Q8IYS8 172 aa7.16□□□□□ -1.26
MRPL55-234ENST00000497758 LINC01600Q96MT4 127 aa7.16□□□□□ -1.26
MRPL55-234ENST00000497758 H0Y9J4 135 aa7.15□□□□□ -1.26
MRPL55-234ENST00000497758 BCE1O60756 84 aa7.15□□□□□ -1.26
MRPL55-234ENST00000497758 S100A6P06703 90 aa7.15□□□□□ -1.26
MRPL55-234ENST00000497758 ZNF861PO60384 105 aa7.14□□□□□ -1.27
MRPL55-234ENST00000497758 RPL28P46779 137 aaKnown RBP7.14□□□□□ -1.27
MRPL55-234ENST00000497758 MIEN1Q9BRT3 115 aa7.14□□□□□ -1.27
MRPL55-234ENST00000497758 IGLV1-50A0A075B6I6 118 aa7.13□□□□□ -1.27
MRPL55-234ENST00000497758 M0R378 163 aa7.13□□□□□ -1.27
MRPL55-234ENST00000497758 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
MRPL55-234ENST00000497758 UBE2AP49459 152 aa7.13□□□□□ -1.27
MRPL55-234ENST00000497758 AKR1D1P51857 326 aa7.13□□□□□ -1.27
MRPL55-234ENST00000497758 DAND5Q8N907 189 aa7.13□□□□□ -1.27
MRPL55-234ENST00000497758 Q8NDZ9 215 aa7.13□□□□□ -1.27
MRPL55-234ENST00000497758 A0A0J9YXY3 114 aa7.12□□□□□ -1.27
MRPL55-234ENST00000497758 NCR3O14931 201 aa7.12□□□□□ -1.27
MRPL55-234ENST00000497758 HIST3H2BBQ8N257 126 aa7.12□□□□□ -1.27
MRPL55-234ENST00000497758 IGKV2D-26A0A0A0MRZ7 120 aa7.11□□□□□ -1.27
MRPL55-234ENST00000497758 ZNF815PA8K554 130 aa7.11□□□□□ -1.27
MRPL55-234ENST00000497758 TMEM238C9JI98 176 aa7.1□□□□□ -1.27
MRPL55-234ENST00000497758 ATOH7Q8N100 152 aa7.1□□□□□ -1.27
MRPL55-234ENST00000497758 HIST1H2BLQ99880 126 aa7.1□□□□□ -1.27
MRPL55-234ENST00000497758 TMEM126AQ9H061 195 aa7.1□□□□□ -1.27
MRPL55-234ENST00000497758 S100A12P80511 92 aa7.09□□□□□ -1.27
MRPL55-234ENST00000497758 FAM19A1Q7Z5A9 133 aa7.09□□□□□ -1.27
MRPL55-234ENST00000497758 TNXBP22105 4242 aa7.08□□□□□ -1.28
MRPL55-234ENST00000497758 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
MRPL55-234ENST00000497758 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
MRPL55-234ENST00000497758 PRYO14603 147 aa7.07□□□□□ -1.28
MRPL55-234ENST00000497758 TIMM17BO60830 172 aa7.07□□□□□ -1.28
MRPL55-234ENST00000497758 NPC2P61916 151 aa7.07□□□□□ -1.28
MRPL55-234ENST00000497758 SNRPEP62304 92 aaKnown RBP7.07□□□□□ -1.28
MRPL55-234ENST00000497758 PRLHP81277 87 aa7.07□□□□□ -1.28
MRPL55-234ENST00000497758 ADAMTSL4-AS1Q5T5F5 129 aa7.07□□□□□ -1.28
MRPL55-234ENST00000497758 SCGB1D4Q6XE38 83 aa7.07□□□□□ -1.28
MRPL55-234ENST00000497758 TTTY13Q9BZ97 58 aa7.07□□□□□ -1.28
MRPL55-234ENST00000497758 SPANXB1Q9NS25 103 aaPredicted RBP7.07□□□□□ -1.28
MRPL55-234ENST00000497758 TRBV10-2A0A0K0K1G8 114 aa7.06□□□□□ -1.28
MRPL55-234ENST00000497758 HSBP1L1C9JCN9 74 aa7.06□□□□□ -1.28
MRPL55-234ENST00000497758 KRTAP10-8P60410 259 aa7.06□□□□□ -1.28
MRPL55-234ENST00000497758 ANKRD39Q53RE8 183 aa7.06□□□□□ -1.28
MRPL55-234ENST00000497758 KRTAP13-1Q8IUC0 172 aa7.06□□□□□ -1.28
MRPL55-234ENST00000497758 PRR26Q8N8Z3 221 aa7.06□□□□□ -1.28
MRPL55-234ENST00000497758 TRBV10-3A0A0K0K1G6 114 aa7.05□□□□□ -1.28
MRPL55-234ENST00000497758 NDUFC2O95298 119 aa7.05□□□□□ -1.28
MRPL55-234ENST00000497758 KRTAP1-4P0C5Y4 121 aa7.05□□□□□ -1.28
MRPL55-234ENST00000497758 DDTP30046 118 aa7.05□□□□□ -1.28
MRPL55-234ENST00000497758 S100A7L2Q5SY68 101 aa7.05□□□□□ -1.28
MRPL55-234ENST00000497758 ETDCA0A1B0GVM5 59 aa7.04□□□□□ -1.28
MRPL55-234ENST00000497758 RPL13AP40429 203 aaKnown RBP7.04□□□□□ -1.28
MRPL55-234ENST00000497758 SOSTDC1Q6X4U4 206 aa7.04□□□□□ -1.28
MRPL55-234ENST00000497758 LINC00308Q8TCZ7 52 aa7.04□□□□□ -1.28
MRPL55-234ENST00000497758 LITAFQ99732 161 aa7.04□□□□□ -1.28
MRPL55-234ENST00000497758 KCNQ1DNQ9H478 68 aa7.04□□□□□ -1.28
MRPL55-234ENST00000497758 HMCN2Q8NDA2 5059 aa7.04□□□□□ -1.28
MRPL55-234ENST00000497758 HIGD2AQ9BW72 106 aa7.03□□□□□ -1.28
MRPL55-234ENST00000497758 C5orf52A6NGY3 159 aa7.02□□□□□ -1.29
MRPL55-234ENST00000497758 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
MRPL55-234ENST00000497758 SCGB1D1O95968 90 aa7.02□□□□□ -1.29
MRPL55-234ENST00000497758 PCP2Q8IVA1 136 aa7.02□□□□□ -1.29
MRPL55-234ENST00000497758 LINC00337Q8N6G1 96 aa7.02□□□□□ -1.29
MRPL55-234ENST00000497758 COPS9Q8WXC6 57 aa7.02□□□□□ -1.29
MRPL55-234ENST00000497758 SPANXCQ9NY87 97 aa7.02□□□□□ -1.29
MRPL55-234ENST00000497758 UBR4Q5T4S7 5183 aa7.02□□□□□ -1.29
MRPL55-234ENST00000497758 CBY1Q9Y3M2 126 aa7.01□□□□□ -1.29
MRPL55-234ENST00000497758 IGLV6-57P01721 117 aa7□□□□□ -1.29
MRPL55-234ENST00000497758 CRYGAP11844 174 aa7□□□□□ -1.29
MRPL55-234ENST00000497758 SPRR1AP35321 89 aa7□□□□□ -1.29
MRPL55-234ENST00000497758 SPANXDQ9BXN6 97 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms