RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 LINC00518Q8N0U6 118 aa12.5□□□□□ -0.41
SCAMP3-209ENST00000497470 C12orf57Q99622 126 aa12.5□□□□□ -0.41
SCAMP3-209ENST00000497470 MIEN1Q9BRT3 115 aa12.5□□□□□ -0.41
SCAMP3-209ENST00000497470 XAGE1AQ9HD64 81 aa12.5□□□□□ -0.41
SCAMP3-209ENST00000497470 PANO1I0J062 215 aa12.49□□□□□ -0.41
SCAMP3-209ENST00000497470 CHTF8P0CG12 524 aa12.49□□□□□ -0.41
SCAMP3-209ENST00000497470 A0A0U1RRA0 63 aa12.48□□□□□ -0.41
SCAMP3-209ENST00000497470 TAL2Q16559 108 aa12.48□□□□□ -0.41
SCAMP3-209ENST00000497470 LINC00308Q8TCZ7 52 aa12.48□□□□□ -0.41
SCAMP3-209ENST00000497470 CIRBP-AS1Q8TBR5 109 aa12.47□□□□□ -0.41
SCAMP3-209ENST00000497470 DPH3Q96FX2 82 aa12.47□□□□□ -0.41
SCAMP3-209ENST00000497470 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCAMP3-209ENST00000497470 TRBV10-2A0A0K0K1G8 114 aa12.45□□□□□ -0.42
SCAMP3-209ENST00000497470 A0A1W2PNN7 141 aa12.45□□□□□ -0.42
SCAMP3-209ENST00000497470 VPREB1P12018 145 aa12.45□□□□□ -0.42
SCAMP3-209ENST00000497470 XGP55808 180 aa12.45□□□□□ -0.42
SCAMP3-209ENST00000497470 C2orf91Q6ZV80 131 aa12.45□□□□□ -0.42
SCAMP3-209ENST00000497470 SCXQ7RTU7 201 aa12.45□□□□□ -0.42
SCAMP3-209ENST00000497470 LBHQ53QV2 105 aaPredicted RBP12.44□□□□□ -0.42
SCAMP3-209ENST00000497470 DAND5Q8N907 189 aa12.44□□□□□ -0.42
SCAMP3-209ENST00000497470 SOSTDC1Q6X4U4 206 aa12.43□□□□□ -0.42
SCAMP3-209ENST00000497470 KRTAP7-1Q8IUC3 87 aa12.43□□□□□ -0.42
SCAMP3-209ENST00000497470 TSTD3H0UI37 97 aa12.42□□□□□ -0.42
SCAMP3-209ENST00000497470 PKHD1P08F94 4074 aa12.42□□□□□ -0.42
SCAMP3-209ENST00000497470 SERTAD4-AS1Q5TG53 156 aa12.41□□□□□ -0.42
SCAMP3-209ENST00000497470 C22orf24Q9Y442 160 aa12.41□□□□□ -0.42
SCAMP3-209ENST00000497470 DNAH5Q8TE73 4624 aa12.4□□□□□ -0.42
SCAMP3-209ENST00000497470 MUSTN1Q8IVN3 82 aa12.4□□□□□ -0.42
SCAMP3-209ENST00000497470 NKAPP1Q8N9T2 125 aa12.4□□□□□ -0.42
SCAMP3-209ENST00000497470 HIST1H4GQ99525 98 aa12.4□□□□□ -0.42
SCAMP3-209ENST00000497470 FAM168BA1KXE4 195 aa12.39□□□□□ -0.43
SCAMP3-209ENST00000497470 M0QXV9 152 aa12.39□□□□□ -0.43
SCAMP3-209ENST00000497470 M0R378 163 aa12.39□□□□□ -0.43
SCAMP3-209ENST00000497470 MRPL55Q7Z7F7 128 aaKnown RBP12.39□□□□□ -0.43
SCAMP3-209ENST00000497470 FAM19A5Q7Z5A7 132 aaPredicted RBP12.38□□□□□ -0.43
SCAMP3-209ENST00000497470 EIF4EBP3O60516 100 aaPredicted RBP12.37□□□□□ -0.43
SCAMP3-209ENST00000497470 HSD52Q0P140 79 aa12.37□□□□□ -0.43
SCAMP3-209ENST00000497470 CBY1Q9Y3M2 126 aa12.37□□□□□ -0.43
SCAMP3-209ENST00000497470 HNRNPA3P51991 378 aaKnown RBP12.36□□□□□ -0.43
SCAMP3-209ENST00000497470 Q8NDZ9 215 aa12.36□□□□□ -0.43
SCAMP3-209ENST00000497470 C7orf33Q8WU49 177 aa12.36□□□□□ -0.43
SCAMP3-209ENST00000497470 CEND1Q8N111 149 aa12.34□□□□□ -0.43
SCAMP3-209ENST00000497470 PRO1933Q9H354 126 aa12.34□□□□□ -0.43
SCAMP3-209ENST00000497470 LRP1BQ9NZR2 4599 aa12.33□□□□□ -0.43
SCAMP3-209ENST00000497470 TMEM238LA0A1B0GVL6 79 aa12.33□□□□□ -0.44
SCAMP3-209ENST00000497470 A6NJY4 79 aa12.33□□□□□ -0.44
SCAMP3-209ENST00000497470 NPC2P61916 151 aa12.33□□□□□ -0.44
SCAMP3-209ENST00000497470 LINC00167Q96N53 147 aa12.33□□□□□ -0.44
SCAMP3-209ENST00000497470 TMEM126AQ9H061 195 aa12.32□□□□□ -0.44
SCAMP3-209ENST00000497470 DYNC1H1Q14204 4646 aaKnown RBP12.32□□□□□ -0.44
SCAMP3-209ENST00000497470 IGLV1-50A0A075B6I6 118 aa12.31□□□□□ -0.44
SCAMP3-209ENST00000497470 IGKV2-28A0A075B6P5 120 aa12.31□□□□□ -0.44
SCAMP3-209ENST00000497470 A4D1N5 150 aa12.31□□□□□ -0.44
SCAMP3-209ENST00000497470 IGKV2D-28P01615 120 aa12.31□□□□□ -0.44
SCAMP3-209ENST00000497470 IGLV6-57P01721 117 aa12.31□□□□□ -0.44
SCAMP3-209ENST00000497470 PHF5AQ7RTV0 110 aaKnown RBP12.31□□□□□ -0.44
SCAMP3-209ENST00000497470 TRAV13-2A0A0B4J235 113 aa12.3□□□□□ -0.44
SCAMP3-209ENST00000497470 KCNQ1DNQ9H478 68 aa12.29□□□□□ -0.44
SCAMP3-209ENST00000497470 DNAH8Q96JB1 4490 aa12.28□□□□□ -0.44
SCAMP3-209ENST00000497470 A0A0B4J2C4 111 aa12.27□□□□□ -0.45
SCAMP3-209ENST00000497470 DDTP30046 118 aa12.27□□□□□ -0.45
SCAMP3-209ENST00000497470 UBE2BP63146 152 aa12.27□□□□□ -0.45
SCAMP3-209ENST00000497470 PRR3P79522 188 aaKnown RBP12.27□□□□□ -0.45
SCAMP3-209ENST00000497470 PRYO14603 147 aa12.26□□□□□ -0.45
SCAMP3-209ENST00000497470 NCR3O14931 201 aa12.26□□□□□ -0.45
SCAMP3-209ENST00000497470 S100A7L2Q5SY68 101 aa12.26□□□□□ -0.45
SCAMP3-209ENST00000497470 M0R143 59 aa12.25□□□□□ -0.45
SCAMP3-209ENST00000497470 LINC00337Q8N6G1 96 aa12.25□□□□□ -0.45
SCAMP3-209ENST00000497470 TRBV10-3A0A0K0K1G6 114 aa12.24□□□□□ -0.45
SCAMP3-209ENST00000497470 A0A1B0GWB2 263 aa12.23□□□□□ -0.45
SCAMP3-209ENST00000497470 FAM229AH3BQW9 127 aa12.23□□□□□ -0.45
SCAMP3-209ENST00000497470 SPRR1AP35321 89 aa12.23□□□□□ -0.45
SCAMP3-209ENST00000497470 LINC00528Q8N1L1 170 aa12.23□□□□□ -0.45
SCAMP3-209ENST00000497470 CFC1BP0CG36 223 aa12.22□□□□□ -0.45
SCAMP3-209ENST00000497470 CFC1P0CG37 223 aa12.22□□□□□ -0.45
SCAMP3-209ENST00000497470 FXYD2P54710 66 aa12.22□□□□□ -0.45
SCAMP3-209ENST00000497470 CTAG1AP78358 180 aa12.22□□□□□ -0.45
SCAMP3-209ENST00000497470 HAMPP81172 84 aa12.22□□□□□ -0.45
SCAMP3-209ENST00000497470 Q8N1X5 172 aa12.22□□□□□ -0.45
SCAMP3-209ENST00000497470 PSORS1C2Q9UIG4 136 aa12.22□□□□□ -0.45
SCAMP3-209ENST00000497470 EPPK1P58107 5090 aaKnown RBP12.22□□□□□ -0.45
SCAMP3-209ENST00000497470 GAGE10A6NGK3 116 aa12.21□□□□□ -0.45
SCAMP3-209ENST00000497470 PLA2G1BP04054 148 aaKnown RBP12.21□□□□□ -0.45
SCAMP3-209ENST00000497470 RPL37AP8A6NKH3 93 aa12.2□□□□□ -0.46
SCAMP3-209ENST00000497470 BVES-AS1Q5T3Y7 98 aa12.2□□□□□ -0.46
SCAMP3-209ENST00000497470 REG3GQ6UW15 175 aa12.2□□□□□ -0.46
SCAMP3-209ENST00000497470 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
SCAMP3-209ENST00000497470 TRBV7-6A0A0J9YX20 115 aa12.19□□□□□ -0.46
SCAMP3-209ENST00000497470 H0Y9J4 135 aa12.19□□□□□ -0.46
SCAMP3-209ENST00000497470 BCE1O60756 84 aa12.19□□□□□ -0.46
SCAMP3-209ENST00000497470 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
SCAMP3-209ENST00000497470 KRTAP11-1Q8IUC1 163 aa12.19□□□□□ -0.46
SCAMP3-209ENST00000497470 TRAV23DV6A0A075B6W5 121 aa12.18□□□□□ -0.46
SCAMP3-209ENST00000497470 A6NDN8 102 aa12.18□□□□□ -0.46
SCAMP3-209ENST00000497470 KRTAP4-16G5E9R7 235 aaPredicted RBP12.18□□□□□ -0.46
SCAMP3-209ENST00000497470 SMR3BP02814 79 aaPredicted RBP12.17□□□□□ -0.46
SCAMP3-209ENST00000497470 RAB37Q96AX2 223 aa12.17□□□□□ -0.46
SCAMP3-209ENST00000497470 PRO1854Q9UHT4 67 aa12.17□□□□□ -0.46
SCAMP3-209ENST00000497470 APOBP04114 4563 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-209ENST00000497470 ZNF73O43830 326 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 308.8 ms