RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 LOC107984156A0A0G2JMH3 177 aa6.49□□□□□ -1.37
SHROOM3-210ENST00000497440 PFN2P35080 140 aa6.49□□□□□ -1.37
SHROOM3-210ENST00000497440 ARL17AQ8IVW1 177 aa6.49□□□□□ -1.37
SHROOM3-210ENST00000497440 LEPROTL1O95214 131 aa6.48□□□□□ -1.37
SHROOM3-210ENST00000497440 RPL37AP8A6NKH3 93 aa6.47□□□□□ -1.37
SHROOM3-210ENST00000497440 RPL28P46779 137 aaKnown RBP6.47□□□□□ -1.37
SHROOM3-210ENST00000497440 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
SHROOM3-210ENST00000497440 SCO1O75880 301 aa6.46□□□□□ -1.38
SHROOM3-210ENST00000497440 HERV-K104P63124 156 aa6.46□□□□□ -1.38
SHROOM3-210ENST00000497440 GAGE10A6NGK3 116 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 M0R378 163 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST1H2BKO60814 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST1H2BJP06899 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST1H2BOP23527 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST1H2BBP33778 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 RPL13AP40429 203 aaKnown RBP6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST1H2BDP58876 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST1H2BCP62807 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST2H2BEQ16778 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 NKAPP1Q8N9T2 125 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST1H2BHQ93079 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST1H2BNQ99877 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HIST1H2BMQ99879 126 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 TMEM126AQ9H061 195 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 HSPB8Q9UJY1 196 aa6.45□□□□□ -1.38
SHROOM3-210ENST00000497440 PLNP26678 52 aa6.44□□□□□ -1.38
SHROOM3-210ENST00000497440 TSPEAR-AS2P59090 65 aa6.44□□□□□ -1.38
SHROOM3-210ENST00000497440 COA6Q5JTJ3 125 aaKnown RBP6.44□□□□□ -1.38
SHROOM3-210ENST00000497440 NDUFA12Q9UI09 145 aa6.44□□□□□ -1.38
SHROOM3-210ENST00000497440 A0A087X002 238 aa6.43□□□□□ -1.38
SHROOM3-210ENST00000497440 LINC00587B1AMM8 73 aa6.43□□□□□ -1.38
SHROOM3-210ENST00000497440 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
SHROOM3-210ENST00000497440 LEPROTO15243 131 aa6.43□□□□□ -1.38
SHROOM3-210ENST00000497440 SMIM13P0DJ93 91 aa6.43□□□□□ -1.38
SHROOM3-210ENST00000497440 SPRR1AP35321 89 aa6.43□□□□□ -1.38
SHROOM3-210ENST00000497440 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
SHROOM3-210ENST00000497440 IGKV2D-26A0A0A0MRZ7 120 aa6.42□□□□□ -1.38
SHROOM3-210ENST00000497440 DPM2O94777 84 aa6.42□□□□□ -1.38
SHROOM3-210ENST00000497440 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
SHROOM3-210ENST00000497440 LINC00158P58513 81 aa6.42□□□□□ -1.38
SHROOM3-210ENST00000497440 FAM229BQ4G0N7 80 aa6.42□□□□□ -1.38
SHROOM3-210ENST00000497440 MUC2Q02817 5179 aa6.42□□□□□ -1.38
SHROOM3-210ENST00000497440 MYMXA0A1B0GTQ4 84 aa6.41□□□□□ -1.38
SHROOM3-210ENST00000497440 TMEM238C9JI98 176 aa6.41□□□□□ -1.38
SHROOM3-210ENST00000497440 FABP4P15090 132 aa6.41□□□□□ -1.38
SHROOM3-210ENST00000497440 MIR7-3HGQ8N6C7 128 aa6.41□□□□□ -1.38
SHROOM3-210ENST00000497440 PLEKHB2Q96CS7 222 aa6.41□□□□□ -1.38
SHROOM3-210ENST00000497440 KCNQ1DNQ9H478 68 aa6.41□□□□□ -1.38
SHROOM3-210ENST00000497440 J3QQQ9 107 aa6.4□□□□□ -1.38
SHROOM3-210ENST00000497440 IGKCP01834 107 aa6.4□□□□□ -1.38
SHROOM3-210ENST00000497440 NMUP48645 174 aa6.4□□□□□ -1.38
SHROOM3-210ENST00000497440 KRTAP13-2Q52LG2 175 aa6.4□□□□□ -1.38
SHROOM3-210ENST00000497440 A0A0U1RRA0 63 aa6.39□□□□□ -1.39
SHROOM3-210ENST00000497440 E9PLD3 99 aa6.39□□□□□ -1.39
SHROOM3-210ENST00000497440 SYS1-DBNDD2H3BUS1 97 aa6.39□□□□□ -1.39
SHROOM3-210ENST00000497440 CRYGAP11844 174 aa6.39□□□□□ -1.39
SHROOM3-210ENST00000497440 CTAG1AP78358 180 aa6.39□□□□□ -1.39
SHROOM3-210ENST00000497440 LINC01545Q5VT33 79 aa6.39□□□□□ -1.39
SHROOM3-210ENST00000497440 LINC00337Q8N6G1 96 aa6.39□□□□□ -1.39
SHROOM3-210ENST00000497440 MAP1LC3CQ9BXW4 147 aa6.39□□□□□ -1.39
SHROOM3-210ENST00000497440 TRBV10-2A0A0K0K1G8 114 aa6.38□□□□□ -1.39
SHROOM3-210ENST00000497440 PRLHP81277 87 aa6.38□□□□□ -1.39
SHROOM3-210ENST00000497440 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
SHROOM3-210ENST00000497440 BOD1L2Q8IYS8 172 aa6.38□□□□□ -1.39
SHROOM3-210ENST00000497440 PMCHL2Q9BQD1 86 aa6.38□□□□□ -1.39
SHROOM3-210ENST00000497440 H0Y8G0 127 aa6.37□□□□□ -1.39
SHROOM3-210ENST00000497440 UBE2AP49459 152 aa6.37□□□□□ -1.39
SHROOM3-210ENST00000497440 MEIG1Q5JSS6 88 aa6.37□□□□□ -1.39
SHROOM3-210ENST00000497440 ANAPC11Q9NYG5 84 aa6.37□□□□□ -1.39
SHROOM3-210ENST00000497440 MUC17Q685J3 4493 aa6.37□□□□□ -1.39
SHROOM3-210ENST00000497440 PRYO14603 147 aa6.36□□□□□ -1.39
SHROOM3-210ENST00000497440 EIF4EBP3O60516 100 aaPredicted RBP6.36□□□□□ -1.39
SHROOM3-210ENST00000497440 NDUFC2O95298 119 aa6.36□□□□□ -1.39
SHROOM3-210ENST00000497440 HERVK_113P61574 105 aa6.36□□□□□ -1.39
SHROOM3-210ENST00000497440 PET117Q6UWS5 81 aa6.36□□□□□ -1.39
SHROOM3-210ENST00000497440 FAM19A1Q7Z5A9 133 aa6.36□□□□□ -1.39
SHROOM3-210ENST00000497440 LITAFQ99732 161 aa6.36□□□□□ -1.39
SHROOM3-210ENST00000497440 A0A0J9YXY3 114 aa6.35□□□□□ -1.39
SHROOM3-210ENST00000497440 ADAMTSL4-AS1Q5T5F5 129 aa6.35□□□□□ -1.39
SHROOM3-210ENST00000497440 SOSTDC1Q6X4U4 206 aa6.35□□□□□ -1.39
SHROOM3-210ENST00000497440 TRBV10-3A0A0K0K1G6 114 aa6.34□□□□□ -1.39
SHROOM3-210ENST00000497440 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
SHROOM3-210ENST00000497440 DAND5Q8N907 189 aa6.34□□□□□ -1.39
SHROOM3-210ENST00000497440 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
SHROOM3-210ENST00000497440 SPRR4Q96PI1 79 aa6.34□□□□□ -1.39
SHROOM3-210ENST00000497440 ATP6V1G1O75348 118 aa6.33□□□□□ -1.4
SHROOM3-210ENST00000497440 C3orf79P0CE67 100 aa6.33□□□□□ -1.4
SHROOM3-210ENST00000497440 B5MCH6 92 aa6.32□□□□□ -1.4
SHROOM3-210ENST00000497440 TIMM17BO60830 172 aa6.32□□□□□ -1.4
SHROOM3-210ENST00000497440 LGALS3P17931 250 aaKnown RBP6.32□□□□□ -1.4
SHROOM3-210ENST00000497440 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
SHROOM3-210ENST00000497440 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
SHROOM3-210ENST00000497440 SMCR5Q8TEV8 140 aa6.32□□□□□ -1.4
SHROOM3-210ENST00000497440 SPANXB1Q9NS25 103 aaPredicted RBP6.32□□□□□ -1.4
SHROOM3-210ENST00000497440 NCR3O14931 201 aa6.31□□□□□ -1.4
SHROOM3-210ENST00000497440 S100A1P23297 94 aa6.31□□□□□ -1.4
SHROOM3-210ENST00000497440 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
SHROOM3-210ENST00000497440 SMCPP49901 116 aaPredicted RBP6.3□□□□□ -1.4
SHROOM3-210ENST00000497440 HIGD2AQ9BW72 106 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms