RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 TRBV27A0A0K0K1C4 114 aa4.65□□□□□ -1.67
HOXA9-206ENST00000497089 NUPR2A6NF83 97 aa4.65□□□□□ -1.67
HOXA9-206ENST00000497089 GIG44P09565 113 aaPredicted RBP4.65□□□□□ -1.67
HOXA9-206ENST00000497089 IGHV3-30-3P0DP02 117 aa4.65□□□□□ -1.67
HOXA9-206ENST00000497089 DEFB131AP59861 70 aa4.65□□□□□ -1.67
HOXA9-206ENST00000497089 C11orf68Q9H3H3 251 aaKnown RBP4.65□□□□□ -1.67
HOXA9-206ENST00000497089 NDUFA12Q9UI09 145 aa4.65□□□□□ -1.67
HOXA9-206ENST00000497089 XCL1P47992 114 aa4.64□□□□□ -1.67
HOXA9-206ENST00000497089 XCL2Q9UBD3 114 aa4.64□□□□□ -1.67
HOXA9-206ENST00000497089 UBE2D4Q9Y2X8 147 aa4.64□□□□□ -1.67
HOXA9-206ENST00000497089 DYNC2H1Q8NCM8 4307 aaKnown RBP4.63□□□□□ -1.67
HOXA9-206ENST00000497089 TRAV7A0A075B6U4 112 aa4.63□□□□□ -1.67
HOXA9-206ENST00000497089 IGLV5-52A0A0A0MRZ9 124 aa4.63□□□□□ -1.67
HOXA9-206ENST00000497089 IGKV2-30P06310 120 aa4.63□□□□□ -1.67
HOXA9-206ENST00000497089 RNASE4P34096 147 aaKnown RBP4.63□□□□□ -1.67
HOXA9-206ENST00000497089 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.63□□□□□ -1.67
HOXA9-206ENST00000497089 C1orf158Q8N1D5 194 aa4.63□□□□□ -1.67
HOXA9-206ENST00000497089 STARD9Q9P2P6 4700 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 IGKV3D-7A0A0C4DH55 119 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 SOCS3O14543 225 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 NDUFA1O15239 70 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 LINC01561Q8N1V8 128 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 Q8NAQ8 132 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 CSNK1G2-AS1Q8NCQ2 148 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 BRK1Q8WUW1 75 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 OBSCN-AS1Q96MR7 158 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 DNAH7Q8WXX0 4024 aa4.62□□□□□ -1.67
HOXA9-206ENST00000497089 SACSQ9NZJ4 4579 aa4.61□□□□□ -1.67
HOXA9-206ENST00000497089 IGLV5-37A0A075B6J1 123 aa4.61□□□□□ -1.67
HOXA9-206ENST00000497089 A0A0J9YXV3 536 aa4.61□□□□□ -1.67
HOXA9-206ENST00000497089 PRAC2D3DTV9 90 aa4.61□□□□□ -1.67
HOXA9-206ENST00000497089 MIFP14174 115 aa4.61□□□□□ -1.67
HOXA9-206ENST00000497089 SNRPD3P62318 126 aaKnown RBP4.61□□□□□ -1.67
HOXA9-206ENST00000497089 RPL39P62891 51 aaKnown RBP4.61□□□□□ -1.67
HOXA9-206ENST00000497089 CD164Q04900 197 aa4.61□□□□□ -1.67
HOXA9-206ENST00000497089 KLKP1Q107X0 134 aa4.61□□□□□ -1.67
HOXA9-206ENST00000497089 C20orf203Q8NBC4 194 aa4.61□□□□□ -1.67
HOXA9-206ENST00000497089 C11orf45Q8TAV5 145 aa4.61□□□□□ -1.67
HOXA9-206ENST00000497089 IGLV4-3A0A075B6K6 122 aa4.6□□□□□ -1.67
HOXA9-206ENST00000497089 IGHV3-64A0A075B6Q5 118 aa4.6□□□□□ -1.67
HOXA9-206ENST00000497089 TRAV13-2A0A0B4J235 113 aa4.6□□□□□ -1.67
HOXA9-206ENST00000497089 TRAV12-3A0A0B4J271 114 aa4.6□□□□□ -1.67
HOXA9-206ENST00000497089 H0YGX0 51 aa4.6□□□□□ -1.67
HOXA9-206ENST00000497089 ADAMTSL4-AS1Q5T5F5 129 aa4.6□□□□□ -1.67
HOXA9-206ENST00000497089 C20orf197Q8N268 126 aa4.6□□□□□ -1.67
HOXA9-206ENST00000497089 KIF25-AS1Q9Y6Z4 181 aa4.6□□□□□ -1.67
HOXA9-206ENST00000497089 H7BZZ5 65 aa4.59□□□□□ -1.67
HOXA9-206ENST00000497089 RPL28P46779 137 aaKnown RBP4.59□□□□□ -1.67
HOXA9-206ENST00000497089 NANOS2P60321 138 aaKnown RBP4.59□□□□□ -1.67
HOXA9-206ENST00000497089 LINC00308Q8TCZ7 52 aa4.59□□□□□ -1.67
HOXA9-206ENST00000497089 Q9H8V8 135 aa4.59□□□□□ -1.67
HOXA9-206ENST00000497089 RYR2Q92736 4967 aa4.59□□□□□ -1.67
HOXA9-206ENST00000497089 DNAH1Q9P2D7 4330 aa4.58□□□□□ -1.68
HOXA9-206ENST00000497089 A8MTW9 85 aa4.58□□□□□ -1.68
HOXA9-206ENST00000497089 PRB4P10163 310 aaPredicted RBP4.58□□□□□ -1.68
HOXA9-206ENST00000497089 LINC00315P59091 139 aa4.58□□□□□ -1.68
HOXA9-206ENST00000497089 RBM3P98179 157 aaKnown RBP4.58□□□□□ -1.68
HOXA9-206ENST00000497089 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
HOXA9-206ENST00000497089 FP248Q71RG6 208 aaPredicted RBP4.58□□□□□ -1.68
HOXA9-206ENST00000497089 LINC00846Q9NV44 126 aa4.58□□□□□ -1.68
HOXA9-206ENST00000497089 A0A087WVE0 104 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 TRBV7-6A0A0J9YX20 115 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 PLAC8L1A1L4L8 177 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 JMJD7-PLA2G4BH0Y9G9 81 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 DEFB4AO15263 64 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 LY6G6CO95867 125 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 CCKP06307 115 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 LYPD5Q6UWN5 251 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 PRR15Q8IV56 129 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 ZFAND2AQ8N6M9 145 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 C22orf24Q9Y442 160 aa4.57□□□□□ -1.68
HOXA9-206ENST00000497089 TRAV10A0A0B4J240 114 aa4.56□□□□□ -1.68
HOXA9-206ENST00000497089 A0A0U1RQV1 116 aa4.56□□□□□ -1.68
HOXA9-206ENST00000497089 CRPP02741 224 aa4.56□□□□□ -1.68
HOXA9-206ENST00000497089 UBL5Q9BZL1 73 aa4.56□□□□□ -1.68
HOXA9-206ENST00000497089 C14orf132Q9NPU4 83 aa4.56□□□□□ -1.68
HOXA9-206ENST00000497089 APLNQ9ULZ1 77 aa4.56□□□□□ -1.68
HOXA9-206ENST00000497089 IGLV5-45A0A087WSX0 123 aa4.55□□□□□ -1.68
HOXA9-206ENST00000497089 F6UB75 175 aa4.55□□□□□ -1.68
HOXA9-206ENST00000497089 RNASE3P12724 160 aaKnown RBP4.55□□□□□ -1.68
HOXA9-206ENST00000497089 DEFB1P60022 68 aa4.55□□□□□ -1.68
HOXA9-206ENST00000497089 PRR9Q5T870 116 aa4.55□□□□□ -1.68
HOXA9-206ENST00000497089 Q6ZTC4 211 aa4.55□□□□□ -1.68
HOXA9-206ENST00000497089 LYSTQ99698 3801 aa4.55□□□□□ -1.68
HOXA9-206ENST00000497089 PLECQ15149 4684 aaKnown RBP4.55□□□□□ -1.68
HOXA9-206ENST00000497089 TRAV23DV6A0A075B6W5 121 aa4.54□□□□□ -1.68
HOXA9-206ENST00000497089 IBA57-AS1B1ANH7 110 aa4.54□□□□□ -1.68
HOXA9-206ENST00000497089 M0QY20 66 aa4.54□□□□□ -1.68
HOXA9-206ENST00000497089 ERC2-IT1O76042 136 aa4.54□□□□□ -1.68
HOXA9-206ENST00000497089 IGKV3-20P01619 116 aa4.54□□□□□ -1.68
HOXA9-206ENST00000497089 Q6ZRU5 148 aa4.54□□□□□ -1.68
HOXA9-206ENST00000497089 ORMDL1Q9P0S3 153 aa4.54□□□□□ -1.68
HOXA9-206ENST00000497089 CELA1Q9UNI1 258 aa4.54□□□□□ -1.68
HOXA9-206ENST00000497089 DEFB131BA0A096LNP1 70 aa4.53□□□□□ -1.68
HOXA9-206ENST00000497089 F8WEM9 126 aa4.53□□□□□ -1.68
HOXA9-206ENST00000497089 SPART-AS1P0CW21 52 aa4.53□□□□□ -1.68
HOXA9-206ENST00000497089 Q75L30 129 aa4.53□□□□□ -1.68
HOXA9-206ENST00000497089 OPRPNQ99935 248 aaPredicted RBP4.53□□□□□ -1.68
HOXA9-206ENST00000497089 FAM218AQ96MZ4 157 aa4.53□□□□□ -1.69
HOXA9-206ENST00000497089 Q9HAA7 133 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms