RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 LRP1Q07954 4544 aaKnown RBP13.93□□□□□ -0.18
CHRD-217ENST00000496527 MYMXA0A1B0GTQ4 84 aa13.93□□□□□ -0.18
CHRD-217ENST00000496527 IGLV5-37A0A075B6J1 123 aa13.92□□□□□ -0.18
CHRD-217ENST00000496527 MEIG1Q5JSS6 88 aa13.92□□□□□ -0.18
CHRD-217ENST00000496527 REG3GQ6UW15 175 aa13.92□□□□□ -0.18
CHRD-217ENST00000496527 A0A0U1RRA0 63 aa13.91□□□□□ -0.18
CHRD-217ENST00000496527 LINC00167Q96N53 147 aa13.91□□□□□ -0.18
CHRD-217ENST00000496527 LINC00587B1AMM8 73 aa13.9□□□□□ -0.18
CHRD-217ENST00000496527 PET117Q6UWS5 81 aa13.9□□□□□ -0.18
CHRD-217ENST00000496527 J3QQQ9 107 aa13.89□□□□□ -0.19
CHRD-217ENST00000496527 SMIM13P0DJ93 91 aa13.89□□□□□ -0.19
CHRD-217ENST00000496527 TSPEAR-AS2P59090 65 aa13.89□□□□□ -0.19
CHRD-217ENST00000496527 RPL24P83731 157 aaKnown RBP13.89□□□□□ -0.19
CHRD-217ENST00000496527 FAT3Q8TDW7 4589 aa13.88□□□□□ -0.19
CHRD-217ENST00000496527 GAGE10A6NGK3 116 aa13.88□□□□□ -0.19
CHRD-217ENST00000496527 RPL37AP8A6NKH3 93 aa13.88□□□□□ -0.19
CHRD-217ENST00000496527 LGALS3P17931 250 aaKnown RBP13.88□□□□□ -0.19
CHRD-217ENST00000496527 LINC01545Q5VT33 79 aa13.88□□□□□ -0.19
CHRD-217ENST00000496527 DIRC1Q969H9 104 aa13.87□□□□□ -0.19
CHRD-217ENST00000496527 C3orf79P0CE67 100 aa13.86□□□□□ -0.19
CHRD-217ENST00000496527 VPREB1P12018 145 aa13.86□□□□□ -0.19
CHRD-217ENST00000496527 NMUP48645 174 aa13.86□□□□□ -0.19
CHRD-217ENST00000496527 KRTDAPP60985 99 aa13.85□□□□□ -0.19
CHRD-217ENST00000496527 LINC01600Q96MT4 127 aa13.85□□□□□ -0.19
CHRD-217ENST00000496527 MIR7-3HGQ8N6C7 128 aa13.84□□□□□ -0.19
CHRD-217ENST00000496527 HERC1Q15751 4861 aa13.83□□□□□ -0.2
CHRD-217ENST00000496527 E9PLD3 99 aa13.83□□□□□ -0.2
CHRD-217ENST00000496527 MT1HL1P0DM35 61 aa13.83□□□□□ -0.2
CHRD-217ENST00000496527 H0Y9J4 135 aa13.81□□□□□ -0.2
CHRD-217ENST00000496527 IGKV2-28A0A075B6P5 120 aa13.8□□□□□ -0.2
CHRD-217ENST00000496527 BCE1O60756 84 aa13.8□□□□□ -0.2
CHRD-217ENST00000496527 IGKV2D-28P01615 120 aa13.8□□□□□ -0.2
CHRD-217ENST00000496527 Q8NDZ9 215 aa13.8□□□□□ -0.2
CHRD-217ENST00000496527 ZNF861PO60384 105 aa13.79□□□□□ -0.2
CHRD-217ENST00000496527 BOD1L2Q8IYS8 172 aa13.79□□□□□ -0.2
CHRD-217ENST00000496527 C20orf202A1L168 122 aa13.78□□□□□ -0.2
CHRD-217ENST00000496527 IGLV1-50A0A075B6I6 118 aa13.77□□□□□ -0.21
CHRD-217ENST00000496527 RPL28P46779 137 aaKnown RBP13.76□□□□□ -0.21
CHRD-217ENST00000496527 M0R378 163 aa13.75□□□□□ -0.21
CHRD-217ENST00000496527 DAND5Q8N907 189 aa13.75□□□□□ -0.21
CHRD-217ENST00000496527 S100A2P29034 98 aa13.74□□□□□ -0.21
CHRD-217ENST00000496527 A0A0J9YXY3 114 aa13.73□□□□□ -0.21
CHRD-217ENST00000496527 S100A6P06703 90 aa13.73□□□□□ -0.21
CHRD-217ENST00000496527 HIST3H2BBQ8N257 126 aa13.73□□□□□ -0.21
CHRD-217ENST00000496527 UBE2AP49459 152 aa13.72□□□□□ -0.21
CHRD-217ENST00000496527 NCR3O14931 201 aa13.71□□□□□ -0.21
CHRD-217ENST00000496527 KRTAP10-8P60410 259 aa13.71□□□□□ -0.21
CHRD-217ENST00000496527 MIEN1Q9BRT3 115 aa13.71□□□□□ -0.21
CHRD-217ENST00000496527 IGKV2D-26A0A0A0MRZ7 120 aa13.7□□□□□ -0.22
CHRD-217ENST00000496527 LOC107984156A0A0G2JMH3 177 aa13.7□□□□□ -0.22
CHRD-217ENST00000496527 TMEM238C9JI98 176 aa13.7□□□□□ -0.22
CHRD-217ENST00000496527 AKR1D1P51857 326 aa13.7□□□□□ -0.22
CHRD-217ENST00000496527 ARL17AQ8IVW1 177 aa13.7□□□□□ -0.22
CHRD-217ENST00000496527 TMEM126AQ9H061 195 aa13.7□□□□□ -0.22
CHRD-217ENST00000496527 HIST1H2BLQ99880 126 aa13.69□□□□□ -0.22
CHRD-217ENST00000496527 ZNF815PA8K554 130 aa13.68□□□□□ -0.22
CHRD-217ENST00000496527 FAM19A1Q7Z5A9 133 aa13.67□□□□□ -0.22
CHRD-217ENST00000496527 ATOH7Q8N100 152 aa13.67□□□□□ -0.22
CHRD-217ENST00000496527 KRTAP1-4P0C5Y4 121 aa13.66□□□□□ -0.22
CHRD-217ENST00000496527 ADAMTSL4-AS1Q5T5F5 129 aa13.66□□□□□ -0.22
CHRD-217ENST00000496527 KRTAP13-1Q8IUC0 172 aa13.66□□□□□ -0.22
CHRD-217ENST00000496527 PRR26Q8N8Z3 221 aa13.65□□□□□ -0.22
CHRD-217ENST00000496527 NPC2P61916 151 aa13.64□□□□□ -0.23
CHRD-217ENST00000496527 TTTY13Q9BZ97 58 aa13.64□□□□□ -0.23
CHRD-217ENST00000496527 TIMM17BO60830 172 aa13.63□□□□□ -0.23
CHRD-217ENST00000496527 SNRPEP62304 92 aaKnown RBP13.63□□□□□ -0.23
CHRD-217ENST00000496527 PRLHP81277 87 aa13.63□□□□□ -0.23
CHRD-217ENST00000496527 ANKRD39Q53RE8 183 aa13.63□□□□□ -0.23
CHRD-217ENST00000496527 TRBV10-2A0A0K0K1G8 114 aa13.62□□□□□ -0.23
CHRD-217ENST00000496527 PRYO14603 147 aa13.62□□□□□ -0.23
CHRD-217ENST00000496527 TRBV10-3A0A0K0K1G6 114 aa13.61□□□□□ -0.23
CHRD-217ENST00000496527 NDUFC2O95298 119 aa13.61□□□□□ -0.23
CHRD-217ENST00000496527 SOSTDC1Q6X4U4 206 aa13.61□□□□□ -0.23
CHRD-217ENST00000496527 LITAFQ99732 161 aa13.61□□□□□ -0.23
CHRD-217ENST00000496527 SPANXB1Q9NS25 103 aaPredicted RBP13.61□□□□□ -0.23
CHRD-217ENST00000496527 S100A12P80511 92 aa13.6□□□□□ -0.23
CHRD-217ENST00000496527 KCNQ1DNQ9H478 68 aa13.6□□□□□ -0.23
CHRD-217ENST00000496527 TNXBP22105 4242 aa13.59□□□□□ -0.23
CHRD-217ENST00000496527 EIF4EBP3O60516 100 aaPredicted RBP13.58□□□□□ -0.24
CHRD-217ENST00000496527 DDTP30046 118 aa13.58□□□□□ -0.24
CHRD-217ENST00000496527 SCGB1D4Q6XE38 83 aa13.58□□□□□ -0.24
CHRD-217ENST00000496527 RPL13AP40429 203 aaKnown RBP13.57□□□□□ -0.24
CHRD-217ENST00000496527 LINC00308Q8TCZ7 52 aa13.57□□□□□ -0.24
CHRD-217ENST00000496527 S100A7L2Q5SY68 101 aa13.56□□□□□ -0.24
CHRD-217ENST00000496527 C5orf52A6NGY3 159 aa13.55□□□□□ -0.24
CHRD-217ENST00000496527 LINC00337Q8N6G1 96 aa13.55□□□□□ -0.24
CHRD-217ENST00000496527 ETDCA0A1B0GVM5 59 aa13.54□□□□□ -0.24
CHRD-217ENST00000496527 HSBP1L1C9JCN9 74 aa13.54□□□□□ -0.24
CHRD-217ENST00000496527 SPRR1AP35321 89 aa13.54□□□□□ -0.24
CHRD-217ENST00000496527 HIGD2AQ9BW72 106 aa13.54□□□□□ -0.24
CHRD-217ENST00000496527 PCP2Q8IVA1 136 aa13.53□□□□□ -0.24
CHRD-217ENST00000496527 SPANXCQ9NY87 97 aa13.53□□□□□ -0.24
CHRD-217ENST00000496527 IGLV6-57P01721 117 aa13.51□□□□□ -0.25
CHRD-217ENST00000496527 CRYGAP11844 174 aa13.51□□□□□ -0.25
CHRD-217ENST00000496527 KRTAP4-16G5E9R7 235 aaPredicted RBP13.5□□□□□ -0.25
CHRD-217ENST00000496527 SCGB1D1O95968 90 aa13.5□□□□□ -0.25
CHRD-217ENST00000496527 SPANXDQ9BXN6 97 aa13.5□□□□□ -0.25
CHRD-217ENST00000496527 ANAPC11Q9NYG5 84 aa13.49□□□□□ -0.25
CHRD-217ENST00000496527 A0A087X002 238 aa13.48□□□□□ -0.25
CHRD-217ENST00000496527 COPS9Q8WXC6 57 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms