RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 Q8N814 137 aa7.45□□□□□ -1.22
CMSS1-208ENST00000496116 C11orf45Q8TAV5 145 aa7.45□□□□□ -1.22
CMSS1-208ENST00000496116 OBSCN-AS1Q96MR7 158 aa7.44□□□□□ -1.22
CMSS1-208ENST00000496116 LINC00167Q96N53 147 aa7.44□□□□□ -1.22
CMSS1-208ENST00000496116 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
CMSS1-208ENST00000496116 TRBV7-7A0A0K0K1E9 115 aa7.43□□□□□ -1.22
CMSS1-208ENST00000496116 SLPIP03973 132 aa7.43□□□□□ -1.22
CMSS1-208ENST00000496116 NDUFV3P56181 108 aaKnown RBP7.43□□□□□ -1.22
CMSS1-208ENST00000496116 C6orf99Q4VX62 202 aa7.43□□□□□ -1.22
CMSS1-208ENST00000496116 LINC00643Q86TS7 51 aa7.43□□□□□ -1.22
CMSS1-208ENST00000496116 C6orf48Q9UBA6 75 aa7.43□□□□□ -1.22
CMSS1-208ENST00000496116 TMEM256-PLSCR3K7ERE1 68 aa7.43□□□□□ -1.22
CMSS1-208ENST00000496116 ESRGQ1W209 222 aa7.43□□□□□ -1.22
CMSS1-208ENST00000496116 C14orf132Q9NPU4 83 aa7.43□□□□□ -1.22
CMSS1-208ENST00000496116 Q8NDZ9 215 aa7.42□□□□□ -1.22
CMSS1-208ENST00000496116 CAMK2N2Q96S95 79 aa7.42□□□□□ -1.22
CMSS1-208ENST00000496116 IMUPQ9GZP8 106 aa7.42□□□□□ -1.22
CMSS1-208ENST00000496116 SDIM1Q6ZPB5 146 aa7.42□□□□□ -1.22
CMSS1-208ENST00000496116 JMJD7-PLA2G4BH0Y9G9 81 aa7.41□□□□□ -1.22
CMSS1-208ENST00000496116 IGLV6-57P01721 117 aa7.41□□□□□ -1.22
CMSS1-208ENST00000496116 RPL18AQ02543 176 aaKnown RBP7.41□□□□□ -1.22
CMSS1-208ENST00000496116 LINC01556Q5JQF7 62 aa7.41□□□□□ -1.22
CMSS1-208ENST00000496116 C9orf129Q5T035 196 aaKnown RBP7.41□□□□□ -1.22
CMSS1-208ENST00000496116 SMCR5Q8TEV8 140 aa7.41□□□□□ -1.22
CMSS1-208ENST00000496116 C1orf43Q9BWL3 253 aa7.41□□□□□ -1.22
CMSS1-208ENST00000496116 KRTAP26-1Q6PEX3 210 aa7.4□□□□□ -1.22
CMSS1-208ENST00000496116 NHLRC4P0CG21 123 aaPredicted RBP7.4□□□□□ -1.23
CMSS1-208ENST00000496116 HIGD2BQ4VC39 106 aa7.4□□□□□ -1.23
CMSS1-208ENST00000496116 LINC00575Q6W349 94 aa7.39□□□□□ -1.23
CMSS1-208ENST00000496116 C2orf48Q96LS8 159 aa7.39□□□□□ -1.23
CMSS1-208ENST00000496116 XAGE1AQ9HD64 81 aa7.39□□□□□ -1.23
CMSS1-208ENST00000496116 ANK2Q01484 3957 aa7.38□□□□□ -1.23
CMSS1-208ENST00000496116 hADV29S1A0JD25 119 aa7.38□□□□□ -1.23
CMSS1-208ENST00000496116 IGKV2D-24A0A075B6R9 120 aa7.37□□□□□ -1.23
CMSS1-208ENST00000496116 F8WDY8 70 aa7.37□□□□□ -1.23
CMSS1-208ENST00000496116 C15orf56Q8N910 161 aa7.37□□□□□ -1.23
CMSS1-208ENST00000496116 TRAV23DV6A0A075B6W5 121 aa7.37□□□□□ -1.23
CMSS1-208ENST00000496116 TRAV10A0A0B4J240 114 aa7.37□□□□□ -1.23
CMSS1-208ENST00000496116 TRBV10-3A0A0K0K1G6 114 aa7.36□□□□□ -1.23
CMSS1-208ENST00000496116 NDUFC2-KCTD14E9PQ53 114 aa7.36□□□□□ -1.23
CMSS1-208ENST00000496116 Q6ZRU5 148 aa7.36□□□□□ -1.23
CMSS1-208ENST00000496116 DIRC1Q969H9 104 aa7.36□□□□□ -1.23
CMSS1-208ENST00000496116 STAB1Q9NY15 2570 aa7.36□□□□□ -1.23
CMSS1-208ENST00000496116 H3BQ85 93 aa7.36□□□□□ -1.23
CMSS1-208ENST00000496116 CCKP06307 115 aa7.36□□□□□ -1.23
CMSS1-208ENST00000496116 DNAH10OSP0CZ25 163 aa7.36□□□□□ -1.23
CMSS1-208ENST00000496116 FBN1P35555 2871 aaKnown RBP7.35□□□□□ -1.23
CMSS1-208ENST00000496116 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
CMSS1-208ENST00000496116 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
CMSS1-208ENST00000496116 CMYA5Q8N3K9 4069 aa7.34□□□□□ -1.23
CMSS1-208ENST00000496116 ZNF73O43830 326 aaPredicted RBP7.34□□□□□ -1.23
CMSS1-208ENST00000496116 VPREB1P12018 145 aa7.34□□□□□ -1.23
CMSS1-208ENST00000496116 LINC00846Q9NV44 126 aa7.34□□□□□ -1.23
CMSS1-208ENST00000496116 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
CMSS1-208ENST00000496116 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
CMSS1-208ENST00000496116 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
CMSS1-208ENST00000496116 M0R378 163 aa7.33□□□□□ -1.24
CMSS1-208ENST00000496116 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
CMSS1-208ENST00000496116 GHRHP01286 108 aa7.33□□□□□ -1.24
CMSS1-208ENST00000496116 SYCNQ0VAF6 134 aa7.33□□□□□ -1.24
CMSS1-208ENST00000496116 TM2D3Q9BRN9 247 aa7.33□□□□□ -1.24
CMSS1-208ENST00000496116 COX7BP24311 80 aa7.32□□□□□ -1.24
CMSS1-208ENST00000496116 TENM3Q9P273 2699 aa7.32□□□□□ -1.24
CMSS1-208ENST00000496116 RBM3P98179 157 aaKnown RBP7.31□□□□□ -1.24
CMSS1-208ENST00000496116 Q6JHZ5 121 aa7.31□□□□□ -1.24
CMSS1-208ENST00000496116 LAMTOR3Q9UHA4 124 aa7.31□□□□□ -1.24
CMSS1-208ENST00000496116 DNAH3Q8TD57 4116 aa7.31□□□□□ -1.24
CMSS1-208ENST00000496116 ELOF1P60002 83 aaKnown RBP7.31□□□□□ -1.24
CMSS1-208ENST00000496116 Q6ZQY7 126 aa7.31□□□□□ -1.24
CMSS1-208ENST00000496116 CCDC179H3BU77 68 aa7.3□□□□□ -1.24
CMSS1-208ENST00000496116 PRB2P02812 416 aaPredicted RBP7.3□□□□□ -1.24
CMSS1-208ENST00000496116 Q6ZRP5 223 aa7.3□□□□□ -1.24
CMSS1-208ENST00000496116 LINC00588Q9Y4M8 146 aa7.3□□□□□ -1.24
CMSS1-208ENST00000496116 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.3□□□□□ -1.24
CMSS1-208ENST00000496116 MRAPQ8TCY5 172 aa7.3□□□□□ -1.24
CMSS1-208ENST00000496116 B5MCH6 92 aa7.29□□□□□ -1.24
CMSS1-208ENST00000496116 RMI2Q96E14 147 aa7.29□□□□□ -1.24
CMSS1-208ENST00000496116 K7EIL1 84 aa7.28□□□□□ -1.24
CMSS1-208ENST00000496116 LOC110117498A0A087WWA1 95 aa7.28□□□□□ -1.24
CMSS1-208ENST00000496116 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
CMSS1-208ENST00000496116 IGKV3D-7A0A0C4DH55 119 aa7.27□□□□□ -1.25
CMSS1-208ENST00000496116 PDE6GP18545 87 aa7.27□□□□□ -1.25
CMSS1-208ENST00000496116 ATP5EP2Q5VTU8 51 aa7.27□□□□□ -1.25
CMSS1-208ENST00000496116 Q6ZQT0 140 aa7.27□□□□□ -1.25
CMSS1-208ENST00000496116 NKAPP1Q8N9T2 125 aa7.27□□□□□ -1.25
CMSS1-208ENST00000496116 UBL5Q9BZL1 73 aa7.27□□□□□ -1.25
CMSS1-208ENST00000496116 TLX1NBP0CAT3 122 aa7.26□□□□□ -1.25
CMSS1-208ENST00000496116 UPK3BQ9BT76 320 aa7.25□□□□□ -1.25
CMSS1-208ENST00000496116 NOTCH1P46531 2555 aa7.25□□□□□ -1.25
CMSS1-208ENST00000496116 USP17L23D6RBM5 183 aa7.25□□□□□ -1.25
CMSS1-208ENST00000496116 ATOX1O00244 68 aa7.24□□□□□ -1.25
CMSS1-208ENST00000496116 HIST1H4AP62805 103 aaKnown RBP7.24□□□□□ -1.25
CMSS1-208ENST00000496116 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
CMSS1-208ENST00000496116 COL6A5A8TX70 2615 aa7.23□□□□□ -1.25
CMSS1-208ENST00000496116 KCNQ1DNQ9H478 68 aa7.23□□□□□ -1.25
CMSS1-208ENST00000496116 PLA2G2DQ9UNK4 145 aa7.23□□□□□ -1.25
CMSS1-208ENST00000496116 SS18L2Q9UHA2 77 aa7.22□□□□□ -1.25
CMSS1-208ENST00000496116 SERTAD4-AS1Q5TG53 156 aa7.21□□□□□ -1.25
CMSS1-208ENST00000496116 C7orf33Q8WU49 177 aa7.21□□□□□ -1.25
CMSS1-208ENST00000496116 UQCRQO14949 82 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms