RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
HDAC9-226ENST00000496026 PCP2Q8IVA1 136 aa9.23□□□□□ -0.93
HDAC9-226ENST00000496026 DAND5Q8N907 189 aa9.23□□□□□ -0.93
HDAC9-226ENST00000496026 C22orf24Q9Y442 160 aa9.23□□□□□ -0.93
HDAC9-226ENST00000496026 RPL24P83731 157 aaKnown RBP9.22□□□□□ -0.93
HDAC9-226ENST00000496026 NKAPP1Q8N9T2 125 aa9.22□□□□□ -0.93
HDAC9-226ENST00000496026 DNAH8Q96JB1 4490 aa9.21□□□□□ -0.93
HDAC9-226ENST00000496026 LBHQ53QV2 105 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-226ENST00000496026 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-226ENST00000496026 MIEN1Q9BRT3 115 aa9.21□□□□□ -0.94
HDAC9-226ENST00000496026 HSPG2P98160 4391 aa9.2□□□□□ -0.94
HDAC9-226ENST00000496026 TIMM17BO60830 172 aa9.2□□□□□ -0.94
HDAC9-226ENST00000496026 UBE2BP63146 152 aa9.2□□□□□ -0.94
HDAC9-226ENST00000496026 ADAMTSL4-AS1Q5T5F5 129 aa9.2□□□□□ -0.94
HDAC9-226ENST00000496026 MRPL55Q7Z7F7 128 aaKnown RBP9.2□□□□□ -0.94
HDAC9-226ENST00000496026 BOD1L2Q8IYS8 172 aa9.2□□□□□ -0.94
HDAC9-226ENST00000496026 TP73-AS1Q9UF72 201 aa9.2□□□□□ -0.94
HDAC9-226ENST00000496026 IGLV5-37A0A075B6J1 123 aa9.19□□□□□ -0.94
HDAC9-226ENST00000496026 VPREB1P12018 145 aa9.19□□□□□ -0.94
HDAC9-226ENST00000496026 VAMP8Q9BV40 100 aa9.19□□□□□ -0.94
HDAC9-226ENST00000496026 PAM16Q9Y3D7 125 aa9.19□□□□□ -0.94
HDAC9-226ENST00000496026 RYR1P21817 5038 aa9.18□□□□□ -0.94
HDAC9-226ENST00000496026 NPC2P61916 151 aa9.18□□□□□ -0.94
HDAC9-226ENST00000496026 PYY3Q5JQD4 70 aa9.18□□□□□ -0.94
HDAC9-226ENST00000496026 LITAFQ99732 161 aa9.18□□□□□ -0.94
HDAC9-226ENST00000496026 GAGE10A6NGK3 116 aa9.17□□□□□ -0.94
HDAC9-226ENST00000496026 TMEM238C9JI98 176 aa9.17□□□□□ -0.94
HDAC9-226ENST00000496026 SPATA45Q537H7 98 aa9.17□□□□□ -0.94
HDAC9-226ENST00000496026 Q8NDZ9 215 aa9.17□□□□□ -0.94
HDAC9-226ENST00000496026 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
HDAC9-226ENST00000496026 KRTAP4-5Q9BYR2 181 aa9.16□□□□□ -0.94
HDAC9-226ENST00000496026 LOC107984156A0A0G2JMH3 177 aa9.15□□□□□ -0.94
HDAC9-226ENST00000496026 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
HDAC9-226ENST00000496026 PRR3P79522 188 aaKnown RBP9.15□□□□□ -0.94
HDAC9-226ENST00000496026 ARL17AQ8IVW1 177 aa9.15□□□□□ -0.94
HDAC9-226ENST00000496026 PSORS1C2Q9UIG4 136 aa9.15□□□□□ -0.94
HDAC9-226ENST00000496026 M0R378 163 aa9.14□□□□□ -0.95
HDAC9-226ENST00000496026 NCR3O14931 201 aa9.14□□□□□ -0.95
HDAC9-226ENST00000496026 COX8AP10176 69 aa9.14□□□□□ -0.95
HDAC9-226ENST00000496026 SOSTDC1Q6X4U4 206 aa9.14□□□□□ -0.95
HDAC9-226ENST00000496026 KRTAP11-1Q8IUC1 163 aa9.14□□□□□ -0.95
HDAC9-226ENST00000496026 LINC00308Q8TCZ7 52 aa9.14□□□□□ -0.95
HDAC9-226ENST00000496026 SPANXDQ9BXN6 97 aa9.14□□□□□ -0.95
HDAC9-226ENST00000496026 SPANXCQ9NY87 97 aa9.14□□□□□ -0.95
HDAC9-226ENST00000496026 KRTAP10-4P60372 401 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-226ENST00000496026 C1orf137Q5JT78 98 aa9.13□□□□□ -0.95
HDAC9-226ENST00000496026 C14orf144Q96I85 54 aa9.13□□□□□ -0.95
HDAC9-226ENST00000496026 IGKV2-28A0A075B6P5 120 aa9.12□□□□□ -0.95
HDAC9-226ENST00000496026 EIF4EBP3O60516 100 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-226ENST00000496026 IGKV2D-28P01615 120 aa9.12□□□□□ -0.95
HDAC9-226ENST00000496026 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
HDAC9-226ENST00000496026 NDUFC2O95298 119 aa9.11□□□□□ -0.95
HDAC9-226ENST00000496026 SRSF9Q13242 221 aaKnown RBP eCLIP9.11□□□□□ -0.95
HDAC9-226ENST00000496026 Q6ZVH6 145 aa9.11□□□□□ -0.95
HDAC9-226ENST00000496026 SPANXB1Q9NS25 103 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-226ENST00000496026 HERC2O95714 4834 aa9.11□□□□□ -0.95
HDAC9-226ENST00000496026 IGLV1-50A0A075B6I6 118 aa9.1□□□□□ -0.95
HDAC9-226ENST00000496026 DLEU1O43261 78 aa9.1□□□□□ -0.95
HDAC9-226ENST00000496026 INAFM2P0DMQ5 153 aa9.1□□□□□ -0.95
HDAC9-226ENST00000496026 IFITM1P13164 125 aa9.1□□□□□ -0.95
HDAC9-226ENST00000496026 TRBV10-2A0A0K0K1G8 114 aa9.09□□□□□ -0.95
HDAC9-226ENST00000496026 S100A12P80511 92 aa9.09□□□□□ -0.95
HDAC9-226ENST00000496026 SLC25A34Q6PIV7 304 aa9.09□□□□□ -0.95
HDAC9-226ENST00000496026 MUSTN1Q8IVN3 82 aa9.08□□□□□ -0.96
HDAC9-226ENST00000496026 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
HDAC9-226ENST00000496026 S100A7L2Q5SY68 101 aa9.07□□□□□ -0.96
HDAC9-226ENST00000496026 TRBV10-3A0A0K0K1G6 114 aa9.06□□□□□ -0.96
HDAC9-226ENST00000496026 DDTP30046 118 aa9.06□□□□□ -0.96
HDAC9-226ENST00000496026 HNRNPA3P51991 378 aaKnown RBP9.06□□□□□ -0.96
HDAC9-226ENST00000496026 HIST1H4GQ99525 98 aa9.06□□□□□ -0.96
HDAC9-226ENST00000496026 BCE1O60756 84 aa9.05□□□□□ -0.96
HDAC9-226ENST00000496026 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
HDAC9-226ENST00000496026 PPDPFQ9H3Y8 114 aa9.05□□□□□ -0.96
HDAC9-226ENST00000496026 FAT1Q14517 4588 aa9.05□□□□□ -0.96
HDAC9-226ENST00000496026 LINC00518Q8N0U6 118 aa9.04□□□□□ -0.96
HDAC9-226ENST00000496026 OR13C6PQ8NH95 151 aa9.04□□□□□ -0.96
HDAC9-226ENST00000496026 TMEM126AQ9H061 195 aa9.04□□□□□ -0.96
HDAC9-226ENST00000496026 LOC105371267A0A1B0GV96 52 aa9.03□□□□□ -0.96
HDAC9-226ENST00000496026 PRYO14603 147 aa9.03□□□□□ -0.96
HDAC9-226ENST00000496026 UBE2AP49459 152 aa9.03□□□□□ -0.96
HDAC9-226ENST00000496026 SPINK6Q6UWN8 80 aa9.03□□□□□ -0.96
HDAC9-226ENST00000496026 HIGD1BQ9P298 99 aa9.03□□□□□ -0.96
HDAC9-226ENST00000496026 SMIM6P0DI80 62 aa9.02□□□□□ -0.97
HDAC9-226ENST00000496026 KCNQ1DNQ9H478 68 aa9.02□□□□□ -0.97
HDAC9-226ENST00000496026 IGLV6-57P01721 117 aa9.01□□□□□ -0.97
HDAC9-226ENST00000496026 RPL28P46779 137 aaKnown RBP9.01□□□□□ -0.97
HDAC9-226ENST00000496026 C2orf91Q6ZV80 131 aa9.01□□□□□ -0.97
HDAC9-226ENST00000496026 FAM19A1Q7Z5A9 133 aa9.01□□□□□ -0.97
HDAC9-226ENST00000496026 SRRM2Q9UQ35 2752 aaKnown RBP9.01□□□□□ -0.97
HDAC9-226ENST00000496026 ZNF861PO60384 105 aa9□□□□□ -0.97
HDAC9-226ENST00000496026 LINC00337Q8N6G1 96 aa9□□□□□ -0.97
HDAC9-226ENST00000496026 DIRC1Q969H9 104 aa9□□□□□ -0.97
HDAC9-226ENST00000496026 CBY1Q9Y3M2 126 aa9□□□□□ -0.97
HDAC9-226ENST00000496026 TRAV23DV6A0A075B6W5 121 aa8.99□□□□□ -0.97
HDAC9-226ENST00000496026 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
HDAC9-226ENST00000496026 A4D1N5 150 aa8.99□□□□□ -0.97
HDAC9-226ENST00000496026 A6NDN8 102 aa8.99□□□□□ -0.97
HDAC9-226ENST00000496026 UQCR10Q9UDW1 63 aa8.99□□□□□ -0.97
HDAC9-226ENST00000496026 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
HDAC9-226ENST00000496026 PRLHP81277 87 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms