RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 LINC00518Q8N0U6 118 aa12.33□□□□□ -0.44
ATG3-208ENST00000495756 A0A1W2PNN7 141 aa12.32□□□□□ -0.44
ATG3-208ENST00000495756 SCXQ7RTU7 201 aa12.32□□□□□ -0.44
ATG3-208ENST00000495756 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 NPC2P61916 151 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 SOSTDC1Q6X4U4 206 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 C2orf91Q6ZV80 131 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 Q6ZVH6 145 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 CIRBP-AS1Q8TBR5 109 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 LINC00308Q8TCZ7 52 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 MIEN1Q9BRT3 115 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
ATG3-208ENST00000495756 PLAC8Q9NZF1 115 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 UQCR10Q9UDW1 63 aa12.31□□□□□ -0.44
ATG3-208ENST00000495756 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
ATG3-208ENST00000495756 HAMPP81172 84 aa12.3□□□□□ -0.44
ATG3-208ENST00000495756 SERTAD4-AS1Q5TG53 156 aa12.3□□□□□ -0.44
ATG3-208ENST00000495756 FAM19A5Q7Z5A7 132 aaPredicted RBP12.3□□□□□ -0.44
ATG3-208ENST00000495756 KRTAP7-1Q8IUC3 87 aa12.3□□□□□ -0.44
ATG3-208ENST00000495756 PRO1933Q9H354 126 aa12.3□□□□□ -0.44
ATG3-208ENST00000495756 PLA2G2DQ9UNK4 145 aa12.3□□□□□ -0.44
ATG3-208ENST00000495756 EPM2AB3EWF7 344 aa12.29□□□□□ -0.44
ATG3-208ENST00000495756 XGP55808 180 aa12.28□□□□□ -0.44
ATG3-208ENST00000495756 SRSF9Q13242 221 aaKnown RBP eCLIP12.28□□□□□ -0.44
ATG3-208ENST00000495756 Q8NDZ9 215 aa12.28□□□□□ -0.44
ATG3-208ENST00000495756 IFITM1P13164 125 aa12.27□□□□□ -0.44
ATG3-208ENST00000495756 VPREB1P12018 145 aa12.27□□□□□ -0.45
ATG3-208ENST00000495756 RPL24P83731 157 aaKnown RBP12.27□□□□□ -0.45
ATG3-208ENST00000495756 COPS9Q8WXC6 57 aa12.27□□□□□ -0.45
ATG3-208ENST00000495756 MUSTN1Q8IVN3 82 aa12.26□□□□□ -0.45
ATG3-208ENST00000495756 HIST1H4GQ99525 98 aa12.26□□□□□ -0.45
ATG3-208ENST00000495756 IGLV5-37A0A075B6J1 123 aa12.25□□□□□ -0.45
ATG3-208ENST00000495756 CDK2AP2O75956 126 aa12.25□□□□□ -0.45
ATG3-208ENST00000495756 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
ATG3-208ENST00000495756 M0QXV9 152 aa12.24□□□□□ -0.45
ATG3-208ENST00000495756 C22orf24Q9Y442 160 aa12.24□□□□□ -0.45
ATG3-208ENST00000495756 NKAPP1Q8N9T2 125 aa12.23□□□□□ -0.45
ATG3-208ENST00000495756 RYR1P21817 5038 aa12.23□□□□□ -0.45
ATG3-208ENST00000495756 TSTD3H0UI37 97 aa12.22□□□□□ -0.45
ATG3-208ENST00000495756 NDUFC2O95298 119 aa12.22□□□□□ -0.45
ATG3-208ENST00000495756 PRR3P79522 188 aaKnown RBP12.22□□□□□ -0.45
ATG3-208ENST00000495756 KIAA1109Q2LD37 5005 aa12.22□□□□□ -0.45
ATG3-208ENST00000495756 PHF5AQ7RTV0 110 aaKnown RBP12.21□□□□□ -0.45
ATG3-208ENST00000495756 HNRNPA3P51991 378 aaKnown RBP12.21□□□□□ -0.46
ATG3-208ENST00000495756 MRPL55Q7Z7F7 128 aaKnown RBP12.21□□□□□ -0.46
ATG3-208ENST00000495756 HSPG2P98160 4391 aa12.21□□□□□ -0.46
ATG3-208ENST00000495756 TAL2Q16559 108 aa12.2□□□□□ -0.46
ATG3-208ENST00000495756 NCR3O14931 201 aa12.19□□□□□ -0.46
ATG3-208ENST00000495756 LBHQ53QV2 105 aaPredicted RBP12.19□□□□□ -0.46
ATG3-208ENST00000495756 C7orf33Q8WU49 177 aa12.19□□□□□ -0.46
ATG3-208ENST00000495756 TRBV10-2A0A0K0K1G8 114 aa12.17□□□□□ -0.46
ATG3-208ENST00000495756 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
ATG3-208ENST00000495756 M0R378 163 aa12.17□□□□□ -0.46
ATG3-208ENST00000495756 HSD52Q0P140 79 aa12.17□□□□□ -0.46
ATG3-208ENST00000495756 LINC00167Q96N53 147 aa12.17□□□□□ -0.46
ATG3-208ENST00000495756 IGKV2-28A0A075B6P5 120 aa12.16□□□□□ -0.46
ATG3-208ENST00000495756 IGKV2D-28P01615 120 aa12.16□□□□□ -0.46
ATG3-208ENST00000495756 A4D1N5 150 aa12.15□□□□□ -0.46
ATG3-208ENST00000495756 CEND1Q8N111 149 aa12.15□□□□□ -0.46
ATG3-208ENST00000495756 SMR3BP02814 79 aaPredicted RBP12.14□□□□□ -0.47
ATG3-208ENST00000495756 UBE2BP63146 152 aa12.14□□□□□ -0.47
ATG3-208ENST00000495756 RPL37AP8A6NKH3 93 aa12.13□□□□□ -0.47
ATG3-208ENST00000495756 KRTAP11-1Q8IUC1 163 aa12.13□□□□□ -0.47
ATG3-208ENST00000495756 FAT1Q14517 4588 aa12.12□□□□□ -0.47
ATG3-208ENST00000495756 IGLV1-50A0A075B6I6 118 aa12.11□□□□□ -0.47
ATG3-208ENST00000495756 LINC00528Q8N1L1 170 aa12.11□□□□□ -0.47
ATG3-208ENST00000495756 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
ATG3-208ENST00000495756 VPS13BQ7Z7G8 4022 aa12.11□□□□□ -0.47
ATG3-208ENST00000495756 TRBV10-3A0A0K0K1G6 114 aa12.1□□□□□ -0.47
ATG3-208ENST00000495756 CTAG1AP78358 180 aa12.1□□□□□ -0.47
ATG3-208ENST00000495756 S100A7L2Q5SY68 101 aa12.1□□□□□ -0.47
ATG3-208ENST00000495756 IGLV6-57P01721 117 aa12.09□□□□□ -0.47
ATG3-208ENST00000495756 DDTP30046 118 aa12.09□□□□□ -0.47
ATG3-208ENST00000495756 FXYD2P54710 66 aa12.09□□□□□ -0.47
ATG3-208ENST00000495756 OR13C6PQ8NH95 151 aa12.08□□□□□ -0.47
ATG3-208ENST00000495756 HERC2O95714 4834 aa12.08□□□□□ -0.48
ATG3-208ENST00000495756 TMEM238LA0A1B0GVL6 79 aa12.08□□□□□ -0.48
ATG3-208ENST00000495756 A6NJY4 79 aa12.08□□□□□ -0.48
ATG3-208ENST00000495756 TMEM126AQ9H061 195 aa12.07□□□□□ -0.48
ATG3-208ENST00000495756 PSORS1C2Q9UIG4 136 aa12.07□□□□□ -0.48
ATG3-208ENST00000495756 TRAV13-2A0A0B4J235 113 aa12.06□□□□□ -0.48
ATG3-208ENST00000495756 A6NDN8 102 aa12.06□□□□□ -0.48
ATG3-208ENST00000495756 CFC1BP0CG36 223 aa12.06□□□□□ -0.48
ATG3-208ENST00000495756 CFC1P0CG37 223 aa12.06□□□□□ -0.48
ATG3-208ENST00000495756 KCNQ1DNQ9H478 68 aa12.05□□□□□ -0.48
ATG3-208ENST00000495756 BVES-AS1Q5T3Y7 98 aa12.04□□□□□ -0.48
ATG3-208ENST00000495756 A0A0B4J2C4 111 aa12.02□□□□□ -0.48
ATG3-208ENST00000495756 M0R143 59 aa12.02□□□□□ -0.48
ATG3-208ENST00000495756 PRYO14603 147 aa12.02□□□□□ -0.48
ATG3-208ENST00000495756 HINT1P49773 126 aaPredicted RBP12.02□□□□□ -0.48
ATG3-208ENST00000495756 RPL37AP61513 92 aaKnown RBP12.02□□□□□ -0.48
ATG3-208ENST00000495756 TRAV23DV6A0A075B6W5 121 aa12.02□□□□□ -0.49
ATG3-208ENST00000495756 FAM229AH3BQW9 127 aa12.02□□□□□ -0.49
ATG3-208ENST00000495756 REG3GQ6UW15 175 aa12.02□□□□□ -0.49
ATG3-208ENST00000495756 RAB37Q96AX2 223 aa12.02□□□□□ -0.49
ATG3-208ENST00000495756 SRRM2Q9UQ35 2752 aaKnown RBP12.01□□□□□ -0.49
ATG3-208ENST00000495756 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
ATG3-208ENST00000495756 KRTAP17-1Q9BYP8 105 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 950 ms