RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 A0A0U1RRA0 63 aa6.81□□□□□ -1.32
SHROOM1-206ENST00000495680 TMEM218A2RU14 115 aa6.81□□□□□ -1.32
SHROOM1-206ENST00000495680 FABP9Q0Z7S8 132 aa6.81□□□□□ -1.32
SHROOM1-206ENST00000495680 COX17Q14061 63 aa6.81□□□□□ -1.32
SHROOM1-206ENST00000495680 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
SHROOM1-206ENST00000495680 CLLU1Q5K131 121 aa6.8□□□□□ -1.32
SHROOM1-206ENST00000495680 SPAG11AQ6PDA7 123 aa6.8□□□□□ -1.32
SHROOM1-206ENST00000495680 Q8NBF4 154 aa6.8□□□□□ -1.32
SHROOM1-206ENST00000495680 S100PP25815 95 aa6.79□□□□□ -1.32
SHROOM1-206ENST00000495680 TMEM170BQ5T4T1 132 aa6.79□□□□□ -1.32
SHROOM1-206ENST00000495680 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
SHROOM1-206ENST00000495680 LINC00158P58513 81 aa6.78□□□□□ -1.32
SHROOM1-206ENST00000495680 BAGE3Q86Y29 109 aa6.78□□□□□ -1.32
SHROOM1-206ENST00000495680 C18orf32Q8TCD1 76 aa6.78□□□□□ -1.32
SHROOM1-206ENST00000495680 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
SHROOM1-206ENST00000495680 HBDP02042 147 aa6.77□□□□□ -1.33
SHROOM1-206ENST00000495680 ASB16-AS1Q495Z4 193 aa6.77□□□□□ -1.33
SHROOM1-206ENST00000495680 NCR3O14931 201 aa6.76□□□□□ -1.33
SHROOM1-206ENST00000495680 LINC00614P0C842 121 aa6.76□□□□□ -1.33
SHROOM1-206ENST00000495680 SPRR1AP35321 89 aa6.76□□□□□ -1.33
SHROOM1-206ENST00000495680 C4orf48Q5BLP8 95 aa6.76□□□□□ -1.33
SHROOM1-206ENST00000495680 UQCC3Q6UW78 93 aa6.76□□□□□ -1.33
SHROOM1-206ENST00000495680 LINC00337Q8N6G1 96 aa6.76□□□□□ -1.33
SHROOM1-206ENST00000495680 SMCR5Q8TEV8 140 aa6.76□□□□□ -1.33
SHROOM1-206ENST00000495680 KRTAP4-16G5E9R7 235 aaPredicted RBP6.75□□□□□ -1.33
SHROOM1-206ENST00000495680 SMIM13P0DJ93 91 aa6.75□□□□□ -1.33
SHROOM1-206ENST00000495680 COX19Q49B96 90 aa6.75□□□□□ -1.33
SHROOM1-206ENST00000495680 SEC11CQ9BY50 192 aa6.75□□□□□ -1.33
SHROOM1-206ENST00000495680 ZNF706Q9Y5V0 76 aaPredicted RBP6.75□□□□□ -1.33
SHROOM1-206ENST00000495680 TMEM223A0PJW6 202 aa6.74□□□□□ -1.33
SHROOM1-206ENST00000495680 PRYO14603 147 aa6.74□□□□□ -1.33
SHROOM1-206ENST00000495680 IFITM2Q01629 132 aa6.74□□□□□ -1.33
SHROOM1-206ENST00000495680 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
SHROOM1-206ENST00000495680 CHTOPQ9Y3Y2 248 aaKnown RBP6.74□□□□□ -1.33
SHROOM1-206ENST00000495680 LINC01547P58512 204 aaPredicted RBP6.73□□□□□ -1.33
SHROOM1-206ENST00000495680 LINC00483Q53H64 154 aa6.73□□□□□ -1.33
SHROOM1-206ENST00000495680 SFTA2Q6UW10 78 aa6.73□□□□□ -1.33
SHROOM1-206ENST00000495680 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
SHROOM1-206ENST00000495680 TRBV10-3A0A0K0K1G6 114 aa6.72□□□□□ -1.33
SHROOM1-206ENST00000495680 ERC2-IT1O76042 136 aa6.72□□□□□ -1.33
SHROOM1-206ENST00000495680 SPINK1P00995 79 aa6.72□□□□□ -1.33
SHROOM1-206ENST00000495680 GAGE2AQ6NT46 116 aa6.72□□□□□ -1.33
SHROOM1-206ENST00000495680 MIR7-3HGQ8N6C7 128 aa6.72□□□□□ -1.33
SHROOM1-206ENST00000495680 RPS10P5Q9NQ39 176 aa6.72□□□□□ -1.33
SHROOM1-206ENST00000495680 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
SHROOM1-206ENST00000495680 MOBPQ13875 183 aa6.71□□□□□ -1.34
SHROOM1-206ENST00000495680 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.34
SHROOM1-206ENST00000495680 IGLV9-49A0A0B4J1Y8 123 aa6.7□□□□□ -1.34
SHROOM1-206ENST00000495680 ETDCA0A1B0GVM5 59 aa6.7□□□□□ -1.34
SHROOM1-206ENST00000495680 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
SHROOM1-206ENST00000495680 MEIG1Q5JSS6 88 aa6.7□□□□□ -1.34
SHROOM1-206ENST00000495680 C10orf91Q5T1B1 145 aa6.7□□□□□ -1.34
SHROOM1-206ENST00000495680 Q8N377 158 aa6.7□□□□□ -1.34
SHROOM1-206ENST00000495680 B5MCH6 92 aa6.69□□□□□ -1.34
SHROOM1-206ENST00000495680 RHEBQ15382 184 aa6.69□□□□□ -1.34
SHROOM1-206ENST00000495680 LCE2CQ5TA81 110 aa6.69□□□□□ -1.34
SHROOM1-206ENST00000495680 COMMD7Q86VX2 200 aa6.69□□□□□ -1.34
SHROOM1-206ENST00000495680 ATP6V1G1O75348 118 aa6.68□□□□□ -1.34
SHROOM1-206ENST00000495680 Q9BRP9 147 aa6.68□□□□□ -1.34
SHROOM1-206ENST00000495680 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
SHROOM1-206ENST00000495680 IFI27L1Q96BM0 104 aa6.67□□□□□ -1.34
SHROOM1-206ENST00000495680 TSPEAR-AS2P59090 65 aa6.66□□□□□ -1.34
SHROOM1-206ENST00000495680 XP32Q5T750 250 aa6.66□□□□□ -1.34
SHROOM1-206ENST00000495680 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
SHROOM1-206ENST00000495680 RPS29P62273 56 aaKnown RBP6.65□□□□□ -1.34
SHROOM1-206ENST00000495680 KRTAP19-2Q3LHN2 52 aa6.65□□□□□ -1.34
SHROOM1-206ENST00000495680 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.34
SHROOM1-206ENST00000495680 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
SHROOM1-206ENST00000495680 HERV-K104P63124 156 aa6.64□□□□□ -1.35
SHROOM1-206ENST00000495680 SLC25A20O43772 301 aa6.63□□□□□ -1.35
SHROOM1-206ENST00000495680 DDTP30046 118 aa6.63□□□□□ -1.35
SHROOM1-206ENST00000495680 Q6ZRX8 168 aa6.63□□□□□ -1.35
SHROOM1-206ENST00000495680 FAM19A2Q8N3H0 131 aa6.62□□□□□ -1.35
SHROOM1-206ENST00000495680 CHCHD1Q96BP2 118 aaKnown RBP6.62□□□□□ -1.35
SHROOM1-206ENST00000495680 LOC107984156A0A0G2JMH3 177 aa6.61□□□□□ -1.35
SHROOM1-206ENST00000495680 MYMXA0A1B0GTQ4 84 aa6.61□□□□□ -1.35
SHROOM1-206ENST00000495680 H0Y8G0 127 aa6.61□□□□□ -1.35
SHROOM1-206ENST00000495680 ARL17AQ8IVW1 177 aa6.61□□□□□ -1.35
SHROOM1-206ENST00000495680 ST20-AS1Q8NBB2 130 aa6.61□□□□□ -1.35
SHROOM1-206ENST00000495680 YPEL4Q96NS1 127 aa6.61□□□□□ -1.35
SHROOM1-206ENST00000495680 TRBV10-2A0A0K0K1G8 114 aa6.6□□□□□ -1.35
SHROOM1-206ENST00000495680 LINC00587B1AMM8 73 aa6.6□□□□□ -1.35
SHROOM1-206ENST00000495680 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
SHROOM1-206ENST00000495680 MT1HP80294 61 aa6.6□□□□□ -1.35
SHROOM1-206ENST00000495680 S100A12P80511 92 aa6.6□□□□□ -1.35
SHROOM1-206ENST00000495680 C9orf153Q5TBE3 101 aa6.6□□□□□ -1.35
SHROOM1-206ENST00000495680 MAP1LC3CQ9BXW4 147 aa6.6□□□□□ -1.35
SHROOM1-206ENST00000495680 IGLV6-57P01721 117 aa6.59□□□□□ -1.35
SHROOM1-206ENST00000495680 APOC3P02656 99 aa6.59□□□□□ -1.35
SHROOM1-206ENST00000495680 SOSTDC1Q6X4U4 206 aa6.59□□□□□ -1.35
SHROOM1-206ENST00000495680 LEPROTO15243 131 aa6.58□□□□□ -1.36
SHROOM1-206ENST00000495680 SPANXB1Q9NS25 103 aaPredicted RBP6.58□□□□□ -1.36
SHROOM1-206ENST00000495680 TRAV23DV6A0A075B6W5 121 aa6.57□□□□□ -1.36
SHROOM1-206ENST00000495680 HSBP1O75506 76 aa6.57□□□□□ -1.36
SHROOM1-206ENST00000495680 NPC2P61916 151 aa6.57□□□□□ -1.36
SHROOM1-206ENST00000495680 PCOTHQ58A44 107 aa6.57□□□□□ -1.36
SHROOM1-206ENST00000495680 J3QQQ9 107 aa6.56□□□□□ -1.36
SHROOM1-206ENST00000495680 LINC00310P59036 64 aa6.56□□□□□ -1.36
SHROOM1-206ENST00000495680 S100A7L2Q5SY68 101 aa6.56□□□□□ -1.36
SHROOM1-206ENST00000495680 PMCHL2Q9BQD1 86 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms