RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 RETNQ9HD89 108 aa10.39□□□□□ -0.75
CALD1-222ENST00000495522 NANOS2P60321 138 aaKnown RBP10.38□□□□□ -0.75
CALD1-222ENST00000495522 C6orf223Q8N319 242 aa10.38□□□□□ -0.75
CALD1-222ENST00000495522 H3BNG1 76 aa10.38□□□□□ -0.75
CALD1-222ENST00000495522 C10orf25Q5T742 122 aa10.38□□□□□ -0.75
CALD1-222ENST00000495522 UNQ6190/PRO20217Q6UXQ8 127 aa10.38□□□□□ -0.75
CALD1-222ENST00000495522 COX7CP15954 63 aa10.37□□□□□ -0.75
CALD1-222ENST00000495522 A0A0J9YWU9 116 aa10.36□□□□□ -0.75
CALD1-222ENST00000495522 KPRPQ5T749 579 aaPredicted RBP10.36□□□□□ -0.75
CALD1-222ENST00000495522 EGFEM1PQ0D2K5 195 aa10.35□□□□□ -0.75
CALD1-222ENST00000495522 GAGE2AQ6NT46 116 aa10.35□□□□□ -0.75
CALD1-222ENST00000495522 OBSCN-AS1Q96MR7 158 aa10.35□□□□□ -0.75
CALD1-222ENST00000495522 ORMDL1Q9P0S3 153 aa10.35□□□□□ -0.75
CALD1-222ENST00000495522 NCR3O14931 201 aa10.34□□□□□ -0.75
CALD1-222ENST00000495522 SLPIP03973 132 aa10.34□□□□□ -0.75
CALD1-222ENST00000495522 TMEM258P61165 79 aa10.34□□□□□ -0.75
CALD1-222ENST00000495522 Q6ZTC4 211 aa10.33□□□□□ -0.76
CALD1-222ENST00000495522 Q8NDZ9 215 aa10.33□□□□□ -0.76
CALD1-222ENST00000495522 LINC00167Q96N53 147 aa10.33□□□□□ -0.76
CALD1-222ENST00000495522 GVQW2A0A096LPI5 108 aaPredicted RBP10.33□□□□□ -0.76
CALD1-222ENST00000495522 SDIM1Q6ZPB5 146 aa10.33□□□□□ -0.76
CALD1-222ENST00000495522 LINC00643Q86TS7 51 aa10.33□□□□□ -0.76
CALD1-222ENST00000495522 SMCR5Q8TEV8 140 aa10.33□□□□□ -0.76
CALD1-222ENST00000495522 FBN1P35555 2871 aaKnown RBP10.33□□□□□ -0.76
CALD1-222ENST00000495522 F8WDY8 70 aa10.32□□□□□ -0.76
CALD1-222ENST00000495522 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
CALD1-222ENST00000495522 C9orf129Q5T035 196 aaKnown RBP10.32□□□□□ -0.76
CALD1-222ENST00000495522 WFDC10BQ8IUB3 73 aa10.32□□□□□ -0.76
CALD1-222ENST00000495522 Q8N814 137 aa10.32□□□□□ -0.76
CALD1-222ENST00000495522 C14orf132Q9NPU4 83 aa10.31□□□□□ -0.76
CALD1-222ENST00000495522 ATOX1O00244 68 aa10.3□□□□□ -0.76
CALD1-222ENST00000495522 C6orf99Q4VX62 202 aa10.29□□□□□ -0.76
CALD1-222ENST00000495522 C2orf48Q96LS8 159 aa10.29□□□□□ -0.76
CALD1-222ENST00000495522 C6orf48Q9UBA6 75 aa10.29□□□□□ -0.76
CALD1-222ENST00000495522 CMYA5Q8N3K9 4069 aa10.28□□□□□ -0.76
CALD1-222ENST00000495522 DPH3Q96FX2 82 aa10.28□□□□□ -0.76
CALD1-222ENST00000495522 HIST1H4AP62805 103 aaKnown RBP10.27□□□□□ -0.77
CALD1-222ENST00000495522 ZNF561-AS1K7EIQ3 104 aa10.26□□□□□ -0.77
CALD1-222ENST00000495522 ESRGQ1W209 222 aa10.26□□□□□ -0.77
CALD1-222ENST00000495522 TMEM256-PLSCR3K7ERE1 68 aa10.26□□□□□ -0.77
CALD1-222ENST00000495522 IGLV6-57P01721 117 aa10.26□□□□□ -0.77
CALD1-222ENST00000495522 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
CALD1-222ENST00000495522 KRTAP26-1Q6PEX3 210 aa10.26□□□□□ -0.77
CALD1-222ENST00000495522 LINC00575Q6W349 94 aa10.25□□□□□ -0.77
CALD1-222ENST00000495522 ANK2Q01484 3957 aa10.24□□□□□ -0.77
CALD1-222ENST00000495522 DEFB131BA0A096LNP1 70 aa10.24□□□□□ -0.77
CALD1-222ENST00000495522 JMJD7-PLA2G4BH0Y9G9 81 aa10.24□□□□□ -0.77
CALD1-222ENST00000495522 HIGD2BQ4VC39 106 aa10.24□□□□□ -0.77
CALD1-222ENST00000495522 C11orf45Q8TAV5 145 aa10.24□□□□□ -0.77
CALD1-222ENST00000495522 CAMK2N2Q96S95 79 aa10.24□□□□□ -0.77
CALD1-222ENST00000495522 Q5XG85 94 aa10.24□□□□□ -0.77
CALD1-222ENST00000495522 XAGE1AQ9HD64 81 aa10.23□□□□□ -0.77
CALD1-222ENST00000495522 DNAH3Q8TD57 4116 aa10.23□□□□□ -0.77
CALD1-222ENST00000495522 PKD1L1Q8TDX9 2849 aa10.23□□□□□ -0.77
CALD1-222ENST00000495522 LINC01556Q5JQF7 62 aa10.22□□□□□ -0.77
CALD1-222ENST00000495522 hADV29S1A0JD25 119 aa10.21□□□□□ -0.77
CALD1-222ENST00000495522 C15orf56Q8N910 161 aa10.21□□□□□ -0.77
CALD1-222ENST00000495522 C1orf43Q9BWL3 253 aa10.21□□□□□ -0.77
CALD1-222ENST00000495522 PRO0628Q9UI54 55 aa10.21□□□□□ -0.77
CALD1-222ENST00000495522 CCKP06307 115 aa10.21□□□□□ -0.78
CALD1-222ENST00000495522 STAB1Q9NY15 2570 aa10.21□□□□□ -0.78
CALD1-222ENST00000495522 TRBV10-3A0A0K0K1G6 114 aa10.2□□□□□ -0.78
CALD1-222ENST00000495522 C4orf26Q17RF5 130 aa10.2□□□□□ -0.78
CALD1-222ENST00000495522 LINC00846Q9NV44 126 aa10.2□□□□□ -0.78
CALD1-222ENST00000495522 HRCT1Q6UXD1 115 aa10.19□□□□□ -0.78
CALD1-222ENST00000495522 Q6ZRU5 148 aa10.19□□□□□ -0.78
CALD1-222ENST00000495522 TRAV23DV6A0A075B6W5 121 aa10.19□□□□□ -0.78
CALD1-222ENST00000495522 COL6A5A8TX70 2615 aa10.18□□□□□ -0.78
CALD1-222ENST00000495522 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
CALD1-222ENST00000495522 DIRC1Q969H9 104 aa10.18□□□□□ -0.78
CALD1-222ENST00000495522 IGKV2D-24A0A075B6R9 120 aa10.17□□□□□ -0.78
CALD1-222ENST00000495522 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
CALD1-222ENST00000495522 VPREB1P12018 145 aa10.16□□□□□ -0.78
CALD1-222ENST00000495522 Q6JHZ5 121 aa10.16□□□□□ -0.78
CALD1-222ENST00000495522 SERP2Q8N6R1 65 aa10.16□□□□□ -0.78
CALD1-222ENST00000495522 OXTP01178 125 aa10.16□□□□□ -0.78
CALD1-222ENST00000495522 UPK3BQ9BT76 320 aa10.16□□□□□ -0.78
CALD1-222ENST00000495522 ZNF73O43830 326 aaPredicted RBP10.15□□□□□ -0.79
CALD1-222ENST00000495522 H3BQ85 93 aa10.14□□□□□ -0.79
CALD1-222ENST00000495522 M0R378 163 aa10.14□□□□□ -0.79
CALD1-222ENST00000495522 DNAH10OSP0CZ25 163 aa10.14□□□□□ -0.79
CALD1-222ENST00000495522 MDFIQ99750 246 aa10.14□□□□□ -0.79
CALD1-222ENST00000495522 TRAV10A0A0B4J240 114 aa10.13□□□□□ -0.79
CALD1-222ENST00000495522 TRBV7-6A0A0J9YX20 115 aa10.13□□□□□ -0.79
CALD1-222ENST00000495522 Q6ZQY7 126 aa10.13□□□□□ -0.79
CALD1-222ENST00000495522 COX7BP24311 80 aa10.12□□□□□ -0.79
CALD1-222ENST00000495522 IGKV3D-7A0A0C4DH55 119 aa10.12□□□□□ -0.79
CALD1-222ENST00000495522 RBM3P98179 157 aaKnown RBP10.12□□□□□ -0.79
CALD1-222ENST00000495522 DSCR8Q96T75 97 aa10.12□□□□□ -0.79
CALD1-222ENST00000495522 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
CALD1-222ENST00000495522 ELOF1P60002 83 aaKnown RBP10.11□□□□□ -0.79
CALD1-222ENST00000495522 SYCNQ0VAF6 134 aa10.11□□□□□ -0.79
CALD1-222ENST00000495522 Q6ZRP5 223 aa10.11□□□□□ -0.79
CALD1-222ENST00000495522 CYSTM1Q9H1C7 97 aa10.11□□□□□ -0.79
CALD1-222ENST00000495522 LOC110117498A0A087WWA1 95 aa10.09□□□□□ -0.79
CALD1-222ENST00000495522 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.09□□□□□ -0.79
CALD1-222ENST00000495522 Q6ZQT0 140 aa10.09□□□□□ -0.79
CALD1-222ENST00000495522 TM2D3Q9BRN9 247 aa10.09□□□□□ -0.79
CALD1-222ENST00000495522 GHRHP01286 108 aa10.08□□□□□ -0.8
CALD1-222ENST00000495522 PRB2P02812 416 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms