RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 DNAH17Q9UFH2 4485 aa6.83□□□□□ -1.32
HDAC3-214ENST00000495485 SYCNQ0VAF6 134 aa6.82□□□□□ -1.32
HDAC3-214ENST00000495485 PSCAO43653 123 aa6.81□□□□□ -1.32
HDAC3-214ENST00000495485 SNCGO76070 127 aa6.81□□□□□ -1.32
HDAC3-214ENST00000495485 HIGD2BQ4VC39 106 aa6.81□□□□□ -1.32
HDAC3-214ENST00000495485 C14orf177Q52M58 125 aa6.81□□□□□ -1.32
HDAC3-214ENST00000495485 C6orf223Q8N319 242 aa6.81□□□□□ -1.32
HDAC3-214ENST00000495485 OR13C6PQ8NH95 151 aa6.81□□□□□ -1.32
HDAC3-214ENST00000495485 TMEM126AQ9H061 195 aa6.81□□□□□ -1.32
HDAC3-214ENST00000495485 H0YGX0 51 aa6.8□□□□□ -1.32
HDAC3-214ENST00000495485 H3BMG7 143 aa6.8□□□□□ -1.32
HDAC3-214ENST00000495485 TRIAP1O43715 76 aa6.8□□□□□ -1.32
HDAC3-214ENST00000495485 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-214ENST00000495485 RPL28P46779 137 aaKnown RBP6.8□□□□□ -1.32
HDAC3-214ENST00000495485 C15orf56Q8N910 161 aa6.8□□□□□ -1.32
HDAC3-214ENST00000495485 PKIGQ9Y2B9 76 aa6.8□□□□□ -1.32
HDAC3-214ENST00000495485 NBDYA0A0U1RRE5 68 aa6.79□□□□□ -1.32
HDAC3-214ENST00000495485 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
HDAC3-214ENST00000495485 TCL1BO95988 128 aa6.79□□□□□ -1.32
HDAC3-214ENST00000495485 S100A7L2Q5SY68 101 aa6.79□□□□□ -1.32
HDAC3-214ENST00000495485 LINC00336Q6ZUF6 198 aa6.79□□□□□ -1.32
HDAC3-214ENST00000495485 C6orf48Q9UBA6 75 aa6.79□□□□□ -1.32
HDAC3-214ENST00000495485 TRBV10-2A0A0K0K1G8 114 aa6.78□□□□□ -1.32
HDAC3-214ENST00000495485 USP17L23D6RBM5 183 aa6.78□□□□□ -1.32
HDAC3-214ENST00000495485 C9orf116Q5BN46 136 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-214ENST00000495485 C10orf25Q5T742 122 aa6.78□□□□□ -1.32
HDAC3-214ENST00000495485 Q6ZR54 194 aa6.78□□□□□ -1.32
HDAC3-214ENST00000495485 Q6ZRU5 148 aa6.78□□□□□ -1.32
HDAC3-214ENST00000495485 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
HDAC3-214ENST00000495485 IGKV2-28A0A075B6P5 120 aa6.77□□□□□ -1.33
HDAC3-214ENST00000495485 J3QR89 54 aa6.77□□□□□ -1.33
HDAC3-214ENST00000495485 IGKV2D-28P01615 120 aa6.77□□□□□ -1.33
HDAC3-214ENST00000495485 LINC00337Q8N6G1 96 aa6.77□□□□□ -1.33
HDAC3-214ENST00000495485 LINC00526Q96FQ7 95 aa6.77□□□□□ -1.33
HDAC3-214ENST00000495485 M0QXV9 152 aa6.76□□□□□ -1.33
HDAC3-214ENST00000495485 FAT2Q9NYQ8 4349 aa6.76□□□□□ -1.33
HDAC3-214ENST00000495485 K7ERU9 68 aa6.75□□□□□ -1.33
HDAC3-214ENST00000495485 LST1O00453 97 aa6.75□□□□□ -1.33
HDAC3-214ENST00000495485 TLX1NBP0CAT3 122 aa6.75□□□□□ -1.33
HDAC3-214ENST00000495485 LINC01620Q4KN68 170 aa6.75□□□□□ -1.33
HDAC3-214ENST00000495485 C1orf134Q5TEV5 83 aa6.75□□□□□ -1.33
HDAC3-214ENST00000495485 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
HDAC3-214ENST00000495485 SLC25A20O43772 301 aa6.74□□□□□ -1.33
HDAC3-214ENST00000495485 DNAL4O96015 105 aa6.74□□□□□ -1.33
HDAC3-214ENST00000495485 TRACP01848 142 aa6.74□□□□□ -1.33
HDAC3-214ENST00000495485 SMIM11BQ8TCY0 68 aa6.74□□□□□ -1.33
HDAC3-214ENST00000495485 LOC107984640A0A0U1RRK4 108 aa6.73□□□□□ -1.33
HDAC3-214ENST00000495485 A0A1B0GX51 115 aa6.73□□□□□ -1.33
HDAC3-214ENST00000495485 C9JAW5 83 aa6.73□□□□□ -1.33
HDAC3-214ENST00000495485 H3BT86 120 aa6.73□□□□□ -1.33
HDAC3-214ENST00000495485 M0R378 163 aa6.73□□□□□ -1.33
HDAC3-214ENST00000495485 NCR3O14931 201 aa6.72□□□□□ -1.33
HDAC3-214ENST00000495485 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
HDAC3-214ENST00000495485 GAGE2EQ4V326 116 aa6.72□□□□□ -1.33
HDAC3-214ENST00000495485 ANKRD29Q8N6D5 301 aa6.72□□□□□ -1.33
HDAC3-214ENST00000495485 GAGE2DQ9UEU5 116 aa6.72□□□□□ -1.33
HDAC3-214ENST00000495485 GHRHP01286 108 aa6.71□□□□□ -1.34
HDAC3-214ENST00000495485 WFDC2Q14508 124 aa6.71□□□□□ -1.34
HDAC3-214ENST00000495485 NKAPP1Q8N9T2 125 aa6.71□□□□□ -1.34
HDAC3-214ENST00000495485 CLEC2BQ92478 149 aa6.71□□□□□ -1.34
HDAC3-214ENST00000495485 LINC01600Q96MT4 127 aa6.71□□□□□ -1.34
HDAC3-214ENST00000495485 XAGE1AQ9HD64 81 aa6.71□□□□□ -1.34
HDAC3-214ENST00000495485 PRO0461Q9UI25 63 aa6.71□□□□□ -1.34
HDAC3-214ENST00000495485 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
HDAC3-214ENST00000495485 PKHD1P08F94 4074 aa6.71□□□□□ -1.34
HDAC3-214ENST00000495485 H3BQ85 93 aa6.7□□□□□ -1.34
HDAC3-214ENST00000495485 M0R2N4 97 aa6.7□□□□□ -1.34
HDAC3-214ENST00000495485 CNBPP62633 177 aaKnown RBP6.7□□□□□ -1.34
HDAC3-214ENST00000495485 OCIAD2Q56VL3 154 aa6.7□□□□□ -1.34
HDAC3-214ENST00000495485 IGLV6-57P01721 117 aa6.69□□□□□ -1.34
HDAC3-214ENST00000495485 ETDBQ3ZM63 59 aa6.69□□□□□ -1.34
HDAC3-214ENST00000495485 Q6ZRP5 223 aa6.69□□□□□ -1.34
HDAC3-214ENST00000495485 TEN1Q86WV5 123 aa6.69□□□□□ -1.34
HDAC3-214ENST00000495485 PKD1P98161 4303 aa6.69□□□□□ -1.34
HDAC3-214ENST00000495485 TRBV7-6A0A0J9YX20 115 aa6.68□□□□□ -1.34
HDAC3-214ENST00000495485 VPREB1P12018 145 aa6.68□□□□□ -1.34
HDAC3-214ENST00000495485 PRR3P79522 188 aaKnown RBP6.68□□□□□ -1.34
HDAC3-214ENST00000495485 PPDPFLQ8WWR9 84 aa6.68□□□□□ -1.34
HDAC3-214ENST00000495485 DIRC1Q969H9 104 aa6.68□□□□□ -1.34
HDAC3-214ENST00000495485 KRTAP1-5Q9BYS1 174 aa6.68□□□□□ -1.34
HDAC3-214ENST00000495485 DNAH11Q96DT5 4516 aa6.68□□□□□ -1.34
HDAC3-214ENST00000495485 TRAV23DV6A0A075B6W5 121 aa6.67□□□□□ -1.34
HDAC3-214ENST00000495485 LECT2O14960 151 aa6.67□□□□□ -1.34
HDAC3-214ENST00000495485 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
HDAC3-214ENST00000495485 RTL8CO15255 209 aa6.66□□□□□ -1.34
HDAC3-214ENST00000495485 GAGE2BQ13066 116 aa6.66□□□□□ -1.34
HDAC3-214ENST00000495485 C6orf99Q4VX62 202 aa6.66□□□□□ -1.34
HDAC3-214ENST00000495485 MTURNQ8N3F0 131 aa6.66□□□□□ -1.34
HDAC3-214ENST00000495485 TRBV10-3A0A0K0K1G6 114 aa6.65□□□□□ -1.34
HDAC3-214ENST00000495485 BAALC-AS2P0C853 105 aa6.65□□□□□ -1.34
HDAC3-214ENST00000495485 SMCPP49901 116 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-214ENST00000495485 Q6ZRN7 208 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-214ENST00000495485 ORMDL1Q9P0S3 153 aa6.65□□□□□ -1.34
HDAC3-214ENST00000495485 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
HDAC3-214ENST00000495485 C16orf90A8MZG2 172 aa6.64□□□□□ -1.35
HDAC3-214ENST00000495485 ZNF73O43830 326 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-214ENST00000495485 SLPIP03973 132 aa6.64□□□□□ -1.35
HDAC3-214ENST00000495485 C9orf129Q5T035 196 aaKnown RBP6.64□□□□□ -1.35
HDAC3-214ENST00000495485 hADV29S1A0JD25 119 aa6.63□□□□□ -1.35
HDAC3-214ENST00000495485 TMEM256-PLSCR3K7ERE1 68 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms