RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TRBV20-1A0A075B6N2 111 aa4.22□□□□□ -1.73
GARNL3-219ENST00000495172 K7EN84 100 aa4.22□□□□□ -1.73
GARNL3-219ENST00000495172 S100ZQ8WXG8 99 aa4.22□□□□□ -1.73
GARNL3-219ENST00000495172 EIF5A2Q9GZV4 153 aaKnown RBP4.22□□□□□ -1.73
GARNL3-219ENST00000495172 PYGO1Q9Y3Y4 419 aa4.22□□□□□ -1.73
GARNL3-219ENST00000495172 PRSS47A8MTI9 375 aa4.21□□□□□ -1.74
GARNL3-219ENST00000495172 KCNRGQ8N5I3 272 aa4.21□□□□□ -1.74
GARNL3-219ENST00000495172 SFT2D1Q8WV19 159 aa4.21□□□□□ -1.74
GARNL3-219ENST00000495172 TMEM141Q96I45 108 aa4.21□□□□□ -1.74
GARNL3-219ENST00000495172 Q9BRP9 147 aa4.21□□□□□ -1.74
GARNL3-219ENST00000495172 FAM240BA0A1B0GVZ2 78 aa4.2□□□□□ -1.74
GARNL3-219ENST00000495172 Q5BKY6 102 aa4.2□□□□□ -1.74
GARNL3-219ENST00000495172 ST20-AS1Q8NBB2 130 aa4.2□□□□□ -1.74
GARNL3-219ENST00000495172 COX7B2Q8TF08 81 aa4.2□□□□□ -1.74
GARNL3-219ENST00000495172 C11orf52Q96A22 123 aa4.2□□□□□ -1.74
GARNL3-219ENST00000495172 A0A0G2JQZ4 141 aa4.19□□□□□ -1.74
GARNL3-219ENST00000495172 ETDCA0A1B0GVM5 59 aa4.19□□□□□ -1.74
GARNL3-219ENST00000495172 SMIM1B2RUZ4 78 aa4.19□□□□□ -1.74
GARNL3-219ENST00000495172 IFI27P40305 119 aaPredicted RBP4.19□□□□□ -1.74
GARNL3-219ENST00000495172 CCL20P78556 96 aa4.19□□□□□ -1.74
GARNL3-219ENST00000495172 IFITM3Q01628 133 aa4.19□□□□□ -1.74
GARNL3-219ENST00000495172 TEX43Q6ZNM6 134 aa4.19□□□□□ -1.74
GARNL3-219ENST00000495172 SPRR1AP35321 89 aa4.18□□□□□ -1.74
GARNL3-219ENST00000495172 CXCL5P42830 114 aa4.18□□□□□ -1.74
GARNL3-219ENST00000495172 RPL24P83731 157 aaKnown RBP4.18□□□□□ -1.74
GARNL3-219ENST00000495172 MRPL51Q4U2R6 128 aaKnown RBP4.18□□□□□ -1.74
GARNL3-219ENST00000495172 Q6ZVH6 145 aa4.18□□□□□ -1.74
GARNL3-219ENST00000495172 FAM213BQ8TBF2 198 aa4.18□□□□□ -1.74
GARNL3-219ENST00000495172 OBSCN-AS1Q96MR7 158 aa4.18□□□□□ -1.74
GARNL3-219ENST00000495172 PRYO14603 147 aa4.17□□□□□ -1.74
GARNL3-219ENST00000495172 SSNA1O43805 119 aa4.17□□□□□ -1.74
GARNL3-219ENST00000495172 Q75L30 129 aa4.17□□□□□ -1.74
GARNL3-219ENST00000495172 SMIM2Q9BVW6 85 aa4.17□□□□□ -1.74
GARNL3-219ENST00000495172 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
GARNL3-219ENST00000495172 FXYD6-FXYD2A0A087WZ82 144 aa4.16□□□□□ -1.74
GARNL3-219ENST00000495172 NCR3O14931 201 aa4.16□□□□□ -1.74
GARNL3-219ENST00000495172 MT1BP07438 61 aa4.16□□□□□ -1.74
GARNL3-219ENST00000495172 SPINK8P0C7L1 97 aa4.16□□□□□ -1.74
GARNL3-219ENST00000495172 Q1RN00 199 aa4.16□□□□□ -1.74
GARNL3-219ENST00000495172 SMIM29Q86T20 159 aa4.16□□□□□ -1.74
GARNL3-219ENST00000495172 GNG13Q9P2W3 67 aa4.16□□□□□ -1.74
GARNL3-219ENST00000495172 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.74
GARNL3-219ENST00000495172 LOC389332A0A1B0GUA5 103 aa4.15□□□□□ -1.75
GARNL3-219ENST00000495172 KRTAP10-5P60370 271 aa4.15□□□□□ -1.75
GARNL3-219ENST00000495172 C2orf66Q6UXQ4 117 aa4.15□□□□□ -1.75
GARNL3-219ENST00000495172 OCC1Q8TAD7 63 aa4.15□□□□□ -1.75
GARNL3-219ENST00000495172 ZNF625Q96I27 306 aaPredicted RBP4.15□□□□□ -1.75
GARNL3-219ENST00000495172 AMELXQ99217 191 aa4.15□□□□□ -1.75
GARNL3-219ENST00000495172 C2orf88Q9BSF0 95 aa4.15□□□□□ -1.75
GARNL3-219ENST00000495172 BORCS7-ASMTA0A0B4J1R7 106 aa4.14□□□□□ -1.75
GARNL3-219ENST00000495172 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
GARNL3-219ENST00000495172 PPP1R2P9O14990 202 aa4.14□□□□□ -1.75
GARNL3-219ENST00000495172 GATCO43716 136 aaKnown RBP4.14□□□□□ -1.75
GARNL3-219ENST00000495172 NPYP01303 97 aa4.14□□□□□ -1.75
GARNL3-219ENST00000495172 ENKURQ8TC29 256 aa4.14□□□□□ -1.75
GARNL3-219ENST00000495172 MBD3L1Q8WWY6 194 aa4.14□□□□□ -1.75
GARNL3-219ENST00000495172 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
GARNL3-219ENST00000495172 RGS21Q2M5E4 152 aa4.13□□□□□ -1.75
GARNL3-219ENST00000495172 C6orf99Q4VX62 202 aa4.13□□□□□ -1.75
GARNL3-219ENST00000495172 LOC107984156A0A0G2JMH3 177 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 TRBV10-3A0A0K0K1G6 114 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 HIGD1CA8MV81 97 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 HRES1P13985 223 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 ARL17AQ8IVW1 177 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 MPLKIPQ8TAP9 179 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 BORCS7Q96B45 105 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 SMIM12Q96EX1 92 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 C20orf78Q9BR46 151 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 VCX2Q9H322 139 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 KCNQ1DNQ9H478 68 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 ERG28Q9UKR5 140 aa4.12□□□□□ -1.75
GARNL3-219ENST00000495172 A0A0U1RRA0 63 aa4.11□□□□□ -1.75
GARNL3-219ENST00000495172 HERVK_113P63121 156 aa4.11□□□□□ -1.75
GARNL3-219ENST00000495172 PCP2Q8IVA1 136 aa4.11□□□□□ -1.75
GARNL3-219ENST00000495172 TRBV24-1A0A075B6N3 115 aa4.1□□□□□ -1.75
GARNL3-219ENST00000495172 ATP5LO75964 103 aa4.1□□□□□ -1.75
GARNL3-219ENST00000495172 PPP1R17O96001 155 aa4.1□□□□□ -1.75
GARNL3-219ENST00000495172 CKS2P33552 79 aa4.1□□□□□ -1.75
GARNL3-219ENST00000495172 TAGLN2P37802 199 aaKnown RBP4.1□□□□□ -1.75
GARNL3-219ENST00000495172 PDZD11Q5EBL8 140 aa4.1□□□□□ -1.75
GARNL3-219ENST00000495172 FAM104BQ5XKR9 115 aa4.1□□□□□ -1.75
GARNL3-219ENST00000495172 BIN3Q9NQY0 253 aa4.1□□□□□ -1.75
GARNL3-219ENST00000495172 TRAV9-1A0A075B6T8 112 aa4.09□□□□□ -1.75
GARNL3-219ENST00000495172 D6R8Y8 96 aa4.09□□□□□ -1.75
GARNL3-219ENST00000495172 A8MWP4 228 aa4.07□□□□□ -1.76
GARNL3-219ENST00000495172 Q6ZRX8 168 aa4.07□□□□□ -1.76
GARNL3-219ENST00000495172 Q96NJ1 140 aa4.07□□□□□ -1.76
GARNL3-219ENST00000495172 IGIPA6NJ69 53 aa4.06□□□□□ -1.76
GARNL3-219ENST00000495172 C10orf91Q5T1B1 145 aa4.06□□□□□ -1.76
GARNL3-219ENST00000495172 MANBALQ9NQG1 85 aa4.06□□□□□ -1.76
GARNL3-219ENST00000495172 RBM12B-AS1Q9P1G2 102 aa4.06□□□□□ -1.76
GARNL3-219ENST00000495172 Q5XG85 94 aa4.05□□□□□ -1.76
GARNL3-219ENST00000495172 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
GARNL3-219ENST00000495172 BOD1L2Q8IYS8 172 aa4.05□□□□□ -1.76
GARNL3-219ENST00000495172 CD164Q04900 197 aa4.04□□□□□ -1.76
GARNL3-219ENST00000495172 RIGQ13278 110 aa4.04□□□□□ -1.76
GARNL3-219ENST00000495172 CYSLTR1Q9Y271 337 aa4.04□□□□□ -1.76
GARNL3-219ENST00000495172 LINC00862A6NCI5 91 aa4.03□□□□□ -1.76
GARNL3-219ENST00000495172 IGLV5-45A0A087WSX0 123 aa4.02□□□□□ -1.77
GARNL3-219ENST00000495172 PDE6DO43924 150 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms