RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 COX7B2Q8TF08 81 aa4.8□□□□□ -1.64
RPGR-210ENST00000494841 CAMK2N2Q96S95 79 aa4.8□□□□□ -1.64
RPGR-210ENST00000494841 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.79□□□□□ -1.64
RPGR-210ENST00000494841 HSBP1L1C9JCN9 74 aa4.79□□□□□ -1.64
RPGR-210ENST00000494841 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
RPGR-210ENST00000494841 SDIM1Q6ZPB5 146 aa4.79□□□□□ -1.64
RPGR-210ENST00000494841 Q8IZM0 81 aa4.79□□□□□ -1.64
RPGR-210ENST00000494841 STPG4Q8N801 248 aa4.79□□□□□ -1.64
RPGR-210ENST00000494841 C2orf48Q96LS8 159 aa4.79□□□□□ -1.64
RPGR-210ENST00000494841 CARD19Q96LW7 228 aa4.79□□□□□ -1.64
RPGR-210ENST00000494841 NDUFA1O15239 70 aa4.78□□□□□ -1.64
RPGR-210ENST00000494841 CKS1BP61024 79 aa4.78□□□□□ -1.64
RPGR-210ENST00000494841 ATOH7Q8N100 152 aa4.78□□□□□ -1.64
RPGR-210ENST00000494841 C6orf48Q9UBA6 75 aa4.78□□□□□ -1.64
RPGR-210ENST00000494841 PANO1I0J062 215 aa4.77□□□□□ -1.65
RPGR-210ENST00000494841 CHTF8P0CG12 524 aa4.77□□□□□ -1.65
RPGR-210ENST00000494841 CFC1BP0CG36 223 aa4.77□□□□□ -1.65
RPGR-210ENST00000494841 CFC1P0CG37 223 aa4.77□□□□□ -1.65
RPGR-210ENST00000494841 SMIM6P0DI80 62 aa4.77□□□□□ -1.65
RPGR-210ENST00000494841 TSPEAR-AS2P59090 65 aa4.77□□□□□ -1.65
RPGR-210ENST00000494841 HAMPP81172 84 aa4.77□□□□□ -1.65
RPGR-210ENST00000494841 ZNF625Q96I27 306 aaPredicted RBP4.77□□□□□ -1.65
RPGR-210ENST00000494841 FAT1Q14517 4588 aa4.77□□□□□ -1.65
RPGR-210ENST00000494841 HERC2O95714 4834 aa4.76□□□□□ -1.65
RPGR-210ENST00000494841 IGKV2-24A0A0C4DH68 120 aa4.76□□□□□ -1.65
RPGR-210ENST00000494841 C20orf202A1L168 122 aa4.76□□□□□ -1.65
RPGR-210ENST00000494841 F8WDY8 70 aa4.76□□□□□ -1.65
RPGR-210ENST00000494841 MAJINQ3KP22 176 aa4.76□□□□□ -1.65
RPGR-210ENST00000494841 A0A096LNI7 61 aa4.75□□□□□ -1.65
RPGR-210ENST00000494841 LEPROTO15243 131 aa4.75□□□□□ -1.65
RPGR-210ENST00000494841 HERVK_113P61574 105 aa4.75□□□□□ -1.65
RPGR-210ENST00000494841 Q6ZRP5 223 aa4.75□□□□□ -1.65
RPGR-210ENST00000494841 DPH3Q96FX2 82 aa4.75□□□□□ -1.65
RPGR-210ENST00000494841 C12orf57Q99622 126 aa4.75□□□□□ -1.65
RPGR-210ENST00000494841 VPS13BQ7Z7G8 4022 aa4.75□□□□□ -1.65
RPGR-210ENST00000494841 IGKV2D-26A0A0A0MRZ7 120 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 TRBV30A0A0K0K1B3 111 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 LOC107984640A0A0U1RRK4 108 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 PCP4L1A6NKN8 68 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 E9PLD3 99 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 J3QQQ9 107 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 PFN2P35080 140 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 CXCL5P42830 114 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 XGP55808 180 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 RPL18AQ02543 176 aaKnown RBP4.74□□□□□ -1.65
RPGR-210ENST00000494841 PLEKHB2Q96CS7 222 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 TTTY13Q9BZ97 58 aa4.74□□□□□ -1.65
RPGR-210ENST00000494841 A0A0U1RRA0 63 aa4.73□□□□□ -1.65
RPGR-210ENST00000494841 LGALS3P17931 250 aaKnown RBP4.73□□□□□ -1.65
RPGR-210ENST00000494841 Q6ZSA8 131 aa4.73□□□□□ -1.65
RPGR-210ENST00000494841 NDUFA12Q9UI09 145 aa4.73□□□□□ -1.65
RPGR-210ENST00000494841 MYMXA0A1B0GTQ4 84 aa4.72□□□□□ -1.65
RPGR-210ENST00000494841 NDUFC2-KCTD14E9PQ53 114 aa4.72□□□□□ -1.65
RPGR-210ENST00000494841 TLX1NBP0CAT3 122 aa4.72□□□□□ -1.65
RPGR-210ENST00000494841 JOSD1Q15040 202 aaPredicted RBP4.72□□□□□ -1.65
RPGR-210ENST00000494841 SCXQ7RTU7 201 aa4.72□□□□□ -1.65
RPGR-210ENST00000494841 CIRBP-AS1Q8TBR5 109 aa4.72□□□□□ -1.65
RPGR-210ENST00000494841 SPACA4Q8TDM5 124 aa4.72□□□□□ -1.65
RPGR-210ENST00000494841 XAGE1AQ9HD64 81 aa4.72□□□□□ -1.65
RPGR-210ENST00000494841 ERG28Q9UKR5 140 aa4.72□□□□□ -1.65
RPGR-210ENST00000494841 A0A1W2PNN7 141 aa4.71□□□□□ -1.66
RPGR-210ENST00000494841 FAM168BA1KXE4 195 aa4.71□□□□□ -1.66
RPGR-210ENST00000494841 SMR3BP02814 79 aaPredicted RBP4.71□□□□□ -1.66
RPGR-210ENST00000494841 SMIM13P0DJ93 91 aa4.71□□□□□ -1.66
RPGR-210ENST00000494841 NMUP48645 174 aa4.71□□□□□ -1.66
RPGR-210ENST00000494841 AKR1D1P51857 326 aa4.71□□□□□ -1.66
RPGR-210ENST00000494841 LINC00158P58513 81 aa4.71□□□□□ -1.66
RPGR-210ENST00000494841 C9orf129Q5T035 196 aaKnown RBP4.71□□□□□ -1.66
RPGR-210ENST00000494841 ABCA13Q86UQ4 5058 aa4.71□□□□□ -1.66
RPGR-210ENST00000494841 ZNF815PA8K554 130 aa4.7□□□□□ -1.66
RPGR-210ENST00000494841 LINC00587B1AMM8 73 aa4.7□□□□□ -1.66
RPGR-210ENST00000494841 HERV-K104P63124 156 aa4.7□□□□□ -1.66
RPGR-210ENST00000494841 CIRBPQ14011 172 aaKnown RBP4.7□□□□□ -1.66
RPGR-210ENST00000494841 PYY3Q5JQD4 70 aa4.7□□□□□ -1.66
RPGR-210ENST00000494841 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
RPGR-210ENST00000494841 PCP2Q8IVA1 136 aa4.7□□□□□ -1.66
RPGR-210ENST00000494841 LITAFQ99732 161 aa4.7□□□□□ -1.66
RPGR-210ENST00000494841 IGLV9-49A0A0B4J1Y8 123 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 A0A0J9YXY3 114 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 CDK2AP2O75956 126 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 COX17Q14061 63 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 ADAMTSL4-AS1Q5T5F5 129 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 SFTA2Q6UW10 78 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 KRTAP7-1Q8IUC3 87 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 DAND5Q8N907 189 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 SND1-IT1Q9HBX3 110 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 LINC00474Q9P2X8 69 aa4.69□□□□□ -1.66
RPGR-210ENST00000494841 SRRM2Q9UQ35 2752 aaKnown RBP4.68□□□□□ -1.66
RPGR-210ENST00000494841 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
RPGR-210ENST00000494841 FAM19A5Q7Z5A7 132 aaPredicted RBP4.68□□□□□ -1.66
RPGR-210ENST00000494841 MIR7-3HGQ8N6C7 128 aa4.68□□□□□ -1.66
RPGR-210ENST00000494841 PLAC8Q9NZF1 115 aa4.68□□□□□ -1.66
RPGR-210ENST00000494841 TP73-AS1Q9UF72 201 aa4.68□□□□□ -1.66
RPGR-210ENST00000494841 PKIGQ9Y2B9 76 aa4.68□□□□□ -1.66
RPGR-210ENST00000494841 NPC2P61916 151 aa4.67□□□□□ -1.66
RPGR-210ENST00000494841 SPATA45Q537H7 98 aa4.67□□□□□ -1.66
RPGR-210ENST00000494841 PHF5AQ7RTV0 110 aaKnown RBP4.67□□□□□ -1.66
RPGR-210ENST00000494841 NOTCH2NLQ7Z3S9 236 aa4.67□□□□□ -1.66
RPGR-210ENST00000494841 Q8NDZ9 215 aa4.67□□□□□ -1.66
RPGR-210ENST00000494841 VAMP8Q9BV40 100 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms