RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 RAPGEF6Q8TEU7 1601 aa0.78□□□□□ -2.28
LRIF1-203ENST00000494675 PTPN23Q9H3S7 1636 aa0.78□□□□□ -2.28
LRIF1-203ENST00000494675 PIEZO2Q9H5I5 2752 aa0.78□□□□□ -2.28
LRIF1-203ENST00000494675 SPTBN1Q01082 2364 aaKnown RBP0.78□□□□□ -2.28
LRIF1-203ENST00000494675 RALGAPBQ86X10 1494 aa0.78□□□□□ -2.28
LRIF1-203ENST00000494675 GLI2P10070 1586 aa0.78□□□□□ -2.28
LRIF1-203ENST00000494675 MROH2AA6NES4 1674 aa0.78□□□□□ -2.29
LRIF1-203ENST00000494675 CACNA1HO95180 2353 aa0.78□□□□□ -2.29
LRIF1-203ENST00000494675 GVQW2A0A096LPI5 108 aaPredicted RBP0.77□□□□□ -2.29
LRIF1-203ENST00000494675 COX8AP10176 69 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 RICTORQ6R327 1708 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 GVINP1Q7Z2Y8 2422 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 NRAPQ86VF7 1730 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 TENM1Q9UKZ4 2725 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 K7EMI3 77 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 IFI27P40305 119 aaPredicted RBP0.77□□□□□ -2.29
LRIF1-203ENST00000494675 PLAC8Q9NZF1 115 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 SPTBN2O15020 2390 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 BPTFQ12830 3046 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 PLCH1Q4KWH8 1693 aa0.77□□□□□ -2.29
LRIF1-203ENST00000494675 LRRC7Q96NW7 1537 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 ZNF292O60281 2723 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 A0A087WWC5 75 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 TRAV21A0A0B4J279 112 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 A0A1B0GU69 56 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 LINC00959A0A1B0GUT2 108 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 SMIM11BQ8TCY0 68 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 SMIM4Q8WVI0 70 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 ITSN2Q9NZM3 1697 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 LAMC1P11047 1609 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 PAPPAQ13219 1627 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 USP32Q8NFA0 1604 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 LMTK2Q8IWU2 1503 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 ABCC2Q92887 1545 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 KIF1AQ12756 1690 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
LRIF1-203ENST00000494675 TMEM263Q8WUH6 116 aaKnown RBP0.76□□□□□ -2.29
LRIF1-203ENST00000494675 POLR1AO95602 1720 aaPredicted RBP0.75□□□□□ -2.29
LRIF1-203ENST00000494675 KNL1Q8NG31 2342 aa0.75□□□□□ -2.29
LRIF1-203ENST00000494675 PTPRQQ9UMZ3 2332 aa0.75□□□□□ -2.29
LRIF1-203ENST00000494675 ATP7BP35670 1465 aa0.75□□□□□ -2.29
LRIF1-203ENST00000494675 A0A1B0GUT8 65 aa0.75□□□□□ -2.29
LRIF1-203ENST00000494675 HMGA1P17096 107 aaKnown RBP0.75□□□□□ -2.29
LRIF1-203ENST00000494675 NREPQ16612 68 aa0.75□□□□□ -2.29
LRIF1-203ENST00000494675 GAFA1Q96PS6 74 aa0.75□□□□□ -2.29
LRIF1-203ENST00000494675 KIAA0556O60303 1618 aa0.75□□□□□ -2.29
LRIF1-203ENST00000494675 SLIT1O75093 1534 aa0.75□□□□□ -2.29
LRIF1-203ENST00000494675 CFAP43Q8NDM7 1665 aa0.75□□□□□ -2.29
LRIF1-203ENST00000494675 PTPRZ1P23471 2315 aaPredicted RBP0.74□□□□□ -2.29
LRIF1-203ENST00000494675 NKTRP30414 1462 aaKnown RBP0.74□□□□□ -2.29
LRIF1-203ENST00000494675 LRRC9Q6ZRR7 1453 aa0.74□□□□□ -2.29
LRIF1-203ENST00000494675 ABCA6Q8N139 1617 aa0.74□□□□□ -2.29
LRIF1-203ENST00000494675 A0A0D9SFI3 127 aa0.74□□□□□ -2.29
LRIF1-203ENST00000494675 RPL37P61927 97 aaKnown RBP0.74□□□□□ -2.29
LRIF1-203ENST00000494675 COX17Q14061 63 aa0.74□□□□□ -2.29
LRIF1-203ENST00000494675 LINC00846Q9NV44 126 aa0.74□□□□□ -2.29
LRIF1-203ENST00000494675 PRXQ9BXM0 1461 aa0.74□□□□□ -2.29
LRIF1-203ENST00000494675 ABCA10Q8WWZ4 1543 aa0.74□□□□□ -2.29
LRIF1-203ENST00000494675 ABCA12Q86UK0 2595 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 PLXNC1O60486 1568 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 CD163L1Q9NR16 1453 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 PREX2Q70Z35 1606 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 LRRC37A2A6NM11 1700 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 SAMD9Q5K651 1589 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 ERCC6L2Q5T890 1561 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 LINC01549A6NIU2 74 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 ATXN8Q156A1 80 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 ENHOQ6UWT2 76 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 UBE2DNLQ8IWF7 75 aa0.73□□□□□ -2.29
LRIF1-203ENST00000494675 URB2Q14146 1524 aaKnown RBP0.73□□□□□ -2.29
LRIF1-203ENST00000494675 POLQO75417 2590 aa0.72□□□□□ -2.29
LRIF1-203ENST00000494675 EEA1Q15075 1411 aa0.72□□□□□ -2.29
LRIF1-203ENST00000494675 ATP5EP2Q5VTU8 51 aa0.72□□□□□ -2.29
LRIF1-203ENST00000494675 LINC00575Q6W349 94 aa0.72□□□□□ -2.29
LRIF1-203ENST00000494675 PKDREJQ9NTG1 2253 aa0.72□□□□□ -2.29
LRIF1-203ENST00000494675 TRBV6-1A0A0K0K1D8 114 aa0.72□□□□□ -2.29
LRIF1-203ENST00000494675 FCER1GP30273 86 aa0.72□□□□□ -2.29
LRIF1-203ENST00000494675 C10orf99Q6UWK7 81 aa0.72□□□□□ -2.29
LRIF1-203ENST00000494675 TIAM1Q13009 1591 aa0.71□□□□□ -2.3
LRIF1-203ENST00000494675 CHD9Q3L8U1 2897 aa0.71□□□□□ -2.3
LRIF1-203ENST00000494675 TJP1Q07157 1748 aa0.71□□□□□ -2.3
LRIF1-203ENST00000494675 FXYD6Q9H0Q3 95 aa0.71□□□□□ -2.3
LRIF1-203ENST00000494675 UGGT1Q9NYU2 1555 aa0.71□□□□□ -2.3
LRIF1-203ENST00000494675 ALS2Q96Q42 1657 aa0.71□□□□□ -2.3
LRIF1-203ENST00000494675 QSER1Q2KHR3 1735 aa0.7□□□□□ -2.3
LRIF1-203ENST00000494675 COX7BP24311 80 aa0.7□□□□□ -2.3
LRIF1-203ENST00000494675 SMIM5Q71RC9 77 aa0.7□□□□□ -2.3
LRIF1-203ENST00000494675 NHSQ6T4R5 1651 aa0.7□□□□□ -2.3
LRIF1-203ENST00000494675 A0A1B0GUL6 1792 aa0.7□□□□□ -2.3
LRIF1-203ENST00000494675 ANKRD36CQ5JPF3 1778 aa0.7□□□□□ -2.3
LRIF1-203ENST00000494675 CICQ96RK0 1608 aaPredicted RBP0.7□□□□□ -2.3
LRIF1-203ENST00000494675 TTC28Q96AY4 2481 aa0.7□□□□□ -2.3
LRIF1-203ENST00000494675 NDUFA4O00483 81 aa0.7□□□□□ -2.3
LRIF1-203ENST00000494675 C10orf95Q9H7T3 257 aa0.7□□□□□ -2.3
LRIF1-203ENST00000494675 K7EIL1 84 aa0.69□□□□□ -2.3
LRIF1-203ENST00000494675 SPINK13Q1W4C9 94 aa0.69□□□□□ -2.3
LRIF1-203ENST00000494675 LELP1Q5T871 98 aa0.69□□□□□ -2.3
LRIF1-203ENST00000494675 NCBP2-AS2Q69YL0 99 aa0.69□□□□□ -2.3
LRIF1-203ENST00000494675 RNF17Q9BXT8 1623 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms