RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 HERVK_113P61574 105 aa14.36□□□□□ -0.11
CLIC3-203ENST00000494426 HERV-K104P63124 156 aa14.36□□□□□ -0.11
CLIC3-203ENST00000494426 LBHQ53QV2 105 aaPredicted RBP14.36□□□□□ -0.11
CLIC3-203ENST00000494426 MRPL55Q7Z7F7 128 aaKnown RBP14.36□□□□□ -0.11
CLIC3-203ENST00000494426 J3QQQ9 107 aa14.35□□□□□ -0.11
CLIC3-203ENST00000494426 SMIM13P0DJ93 91 aa14.35□□□□□ -0.11
CLIC3-203ENST00000494426 MYMXA0A1B0GTQ4 84 aa14.34□□□□□ -0.11
CLIC3-203ENST00000494426 J3QL48 77 aa14.34□□□□□ -0.11
CLIC3-203ENST00000494426 IGLV7-43P04211 117 aa14.34□□□□□ -0.11
CLIC3-203ENST00000494426 Q8NDZ9 215 aa14.34□□□□□ -0.11
CLIC3-203ENST00000494426 LINC00167Q96N53 147 aa14.34□□□□□ -0.11
CLIC3-203ENST00000494426 VPREB1P12018 145 aa14.33□□□□□ -0.12
CLIC3-203ENST00000494426 KRTDAPP60985 99 aa14.33□□□□□ -0.12
CLIC3-203ENST00000494426 MEIG1Q5JSS6 88 aa14.32□□□□□ -0.12
CLIC3-203ENST00000494426 E9PLD3 99 aa14.31□□□□□ -0.12
CLIC3-203ENST00000494426 LGALS3P17931 250 aaKnown RBP14.3□□□□□ -0.12
CLIC3-203ENST00000494426 NKAPP1Q8N9T2 125 aa14.3□□□□□ -0.12
CLIC3-203ENST00000494426 GAGE10A6NGK3 116 aa14.29□□□□□ -0.12
CLIC3-203ENST00000494426 RPL37AP8A6NKH3 93 aa14.29□□□□□ -0.12
CLIC3-203ENST00000494426 HIST3H2BBQ8N257 126 aa14.29□□□□□ -0.12
CLIC3-203ENST00000494426 MIR7-3HGQ8N6C7 128 aa14.29□□□□□ -0.12
CLIC3-203ENST00000494426 DMBT1Q9UGM3 2413 aaPredicted RBP14.29□□□□□ -0.12
CLIC3-203ENST00000494426 LINC00587B1AMM8 73 aa14.28□□□□□ -0.12
CLIC3-203ENST00000494426 NMUP48645 174 aa14.28□□□□□ -0.12
CLIC3-203ENST00000494426 RPL24P83731 157 aaKnown RBP14.27□□□□□ -0.13
CLIC3-203ENST00000494426 MT1HL1P0DM35 61 aa14.26□□□□□ -0.13
CLIC3-203ENST00000494426 HIST1H2BLQ99880 126 aa14.24□□□□□ -0.13
CLIC3-203ENST00000494426 IGKV2D-26A0A0A0MRZ7 120 aa14.23□□□□□ -0.13
CLIC3-203ENST00000494426 LINC01600Q96MT4 127 aa14.23□□□□□ -0.13
CLIC3-203ENST00000494426 REG3GQ6UW15 175 aa14.22□□□□□ -0.13
CLIC3-203ENST00000494426 DAND5Q8N907 189 aa14.22□□□□□ -0.13
CLIC3-203ENST00000494426 IGLV1-50A0A075B6I6 118 aa14.21□□□□□ -0.13
CLIC3-203ENST00000494426 A0A0J9YXY3 114 aa14.21□□□□□ -0.13
CLIC3-203ENST00000494426 IGKV2-28A0A075B6P5 120 aa14.2□□□□□ -0.14
CLIC3-203ENST00000494426 C20orf202A1L168 122 aa14.2□□□□□ -0.14
CLIC3-203ENST00000494426 IGKV2D-28P01615 120 aa14.2□□□□□ -0.14
CLIC3-203ENST00000494426 S100A6P06703 90 aa14.2□□□□□ -0.14
CLIC3-203ENST00000494426 BOD1L2Q8IYS8 172 aa14.2□□□□□ -0.14
CLIC3-203ENST00000494426 DIRC1Q969H9 104 aa14.2□□□□□ -0.14
CLIC3-203ENST00000494426 LOC107984156A0A0G2JMH3 177 aa14.19□□□□□ -0.14
CLIC3-203ENST00000494426 H0Y9J4 135 aa14.19□□□□□ -0.14
CLIC3-203ENST00000494426 BCE1O60756 84 aa14.19□□□□□ -0.14
CLIC3-203ENST00000494426 S100A2P29034 98 aa14.19□□□□□ -0.14
CLIC3-203ENST00000494426 ARL17AQ8IVW1 177 aa14.19□□□□□ -0.14
CLIC3-203ENST00000494426 ZNF861PO60384 105 aa14.18□□□□□ -0.14
CLIC3-203ENST00000494426 ATOH7Q8N100 152 aa14.18□□□□□ -0.14
CLIC3-203ENST00000494426 SNRPEP62304 92 aaKnown RBP14.17□□□□□ -0.14
CLIC3-203ENST00000494426 ADAMTSL4-AS1Q5T5F5 129 aa14.17□□□□□ -0.14
CLIC3-203ENST00000494426 TTTY13Q9BZ97 58 aa14.17□□□□□ -0.14
CLIC3-203ENST00000494426 M0R378 163 aa14.16□□□□□ -0.14
CLIC3-203ENST00000494426 ANKRD39Q53RE8 183 aa14.16□□□□□ -0.14
CLIC3-203ENST00000494426 TMEM238C9JI98 176 aa14.14□□□□□ -0.15
CLIC3-203ENST00000494426 KRTAP10-8P60410 259 aa14.14□□□□□ -0.15
CLIC3-203ENST00000494426 C5orf52A6NGY3 159 aa14.13□□□□□ -0.15
CLIC3-203ENST00000494426 ZNF815PA8K554 130 aa14.13□□□□□ -0.15
CLIC3-203ENST00000494426 NCR3O14931 201 aa14.13□□□□□ -0.15
CLIC3-203ENST00000494426 KRTAP13-1Q8IUC0 172 aa14.13□□□□□ -0.15
CLIC3-203ENST00000494426 LITAFQ99732 161 aa14.13□□□□□ -0.15
CLIC3-203ENST00000494426 EIF4EBP3O60516 100 aaPredicted RBP14.12□□□□□ -0.15
CLIC3-203ENST00000494426 SOSTDC1Q6X4U4 206 aa14.12□□□□□ -0.15
CLIC3-203ENST00000494426 TMEM126AQ9H061 195 aa14.12□□□□□ -0.15
CLIC3-203ENST00000494426 TNXBP22105 4242 aa14.11□□□□□ -0.15
CLIC3-203ENST00000494426 KRTAP1-4P0C5Y4 121 aa14.1□□□□□ -0.15
CLIC3-203ENST00000494426 RPL28P46779 137 aaKnown RBP14.1□□□□□ -0.15
CLIC3-203ENST00000494426 AKR1D1P51857 326 aa14.1□□□□□ -0.15
CLIC3-203ENST00000494426 TIMM17BO60830 172 aa14.09□□□□□ -0.15
CLIC3-203ENST00000494426 NPC2P61916 151 aa14.08□□□□□ -0.16
CLIC3-203ENST00000494426 UBE2AP49459 152 aa14.06□□□□□ -0.16
CLIC3-203ENST00000494426 MIEN1Q9BRT3 115 aa14.06□□□□□ -0.16
CLIC3-203ENST00000494426 NDUFC2O95298 119 aa14.05□□□□□ -0.16
CLIC3-203ENST00000494426 FAM19A1Q7Z5A9 133 aa14.05□□□□□ -0.16
CLIC3-203ENST00000494426 UBR4Q5T4S7 5183 aa14.04□□□□□ -0.16
CLIC3-203ENST00000494426 TRBV10-3A0A0K0K1G6 114 aa14.04□□□□□ -0.16
CLIC3-203ENST00000494426 PRLHP81277 87 aa14.04□□□□□ -0.16
CLIC3-203ENST00000494426 PCP2Q8IVA1 136 aa14.04□□□□□ -0.16
CLIC3-203ENST00000494426 LINC00308Q8TCZ7 52 aa14.04□□□□□ -0.16
CLIC3-203ENST00000494426 KCNQ1DNQ9H478 68 aa14.04□□□□□ -0.16
CLIC3-203ENST00000494426 TRBV10-2A0A0K0K1G8 114 aa14.03□□□□□ -0.16
CLIC3-203ENST00000494426 PRR26Q8N8Z3 221 aa14.03□□□□□ -0.16
CLIC3-203ENST00000494426 PRYO14603 147 aa14.02□□□□□ -0.17
CLIC3-203ENST00000494426 SPANXB1Q9NS25 103 aaPredicted RBP14.02□□□□□ -0.17
CLIC3-203ENST00000494426 SPRR1AP35321 89 aa14.01□□□□□ -0.17
CLIC3-203ENST00000494426 DDTP30046 118 aa13.99□□□□□ -0.17
CLIC3-203ENST00000494426 KRTAP4-16G5E9R7 235 aaPredicted RBP13.98□□□□□ -0.17
CLIC3-203ENST00000494426 SCGB1D4Q6XE38 83 aa13.98□□□□□ -0.17
CLIC3-203ENST00000494426 SCGB1D1O95968 90 aa13.97□□□□□ -0.17
CLIC3-203ENST00000494426 SPANXDQ9BXN6 97 aa13.97□□□□□ -0.17
CLIC3-203ENST00000494426 SPANXCQ9NY87 97 aa13.97□□□□□ -0.17
CLIC3-203ENST00000494426 IGLV6-57P01721 117 aa13.96□□□□□ -0.17
CLIC3-203ENST00000494426 LINC00337Q8N6G1 96 aa13.96□□□□□ -0.17
CLIC3-203ENST00000494426 HSBP1L1C9JCN9 74 aa13.94□□□□□ -0.18
CLIC3-203ENST00000494426 S100A7L2Q5SY68 101 aa13.93□□□□□ -0.18
CLIC3-203ENST00000494426 ANAPC11Q9NYG5 84 aa13.92□□□□□ -0.18
CLIC3-203ENST00000494426 HIGD2AQ9BW72 106 aa13.91□□□□□ -0.18
CLIC3-203ENST00000494426 A0A087X002 238 aa13.9□□□□□ -0.18
CLIC3-203ENST00000494426 ETDCA0A1B0GVM5 59 aa13.89□□□□□ -0.19
CLIC3-203ENST00000494426 B5MCH6 92 aa13.89□□□□□ -0.19
CLIC3-203ENST00000494426 S100A12P80511 92 aa13.89□□□□□ -0.19
CLIC3-203ENST00000494426 IFITM1P13164 125 aa13.88□□□□□ -0.19
CLIC3-203ENST00000494426 Q6ZVH6 145 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms