RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 CADP27708 2225 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 A0A1W2PPR1 153 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 FAM229BQ4G0N7 80 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 SPANXN1Q5VSR9 72 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 UNQ9165/PRO28630Q6UXU0 137 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 DAZ4Q86SG3 579 aaKnown RBP1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 DEFB127Q9H1M4 99 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 DAZ1Q9NQZ3 744 aaKnown RBP1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 DAZ3Q9NR90 486 aaKnown RBP1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 LINC00527Q9UJ94 153 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 NF1P21359 2839 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 USP24Q9UPU5 2620 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRAV12-2A0A075B6T6 113 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 NKAPP1Q8N9T2 125 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 S4R3C0 116 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 CEP290O15078 2479 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGLV5-48A0A075B6I7 105 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRAV7A0A075B6U4 112 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRBV6-4A0A1B0GX49 114 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 SPRR1AP35321 89 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 COX17Q14061 63 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 KPRPQ5T749 579 aaPredicted RBP1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 JPT2Q9H910 190 aa1.64□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRAV13-2A0A0B4J235 113 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 hDV103S1A0JD37 113 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGKV4-1P06312 121 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 LGALS3P17931 250 aaKnown RBP1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 BSPH1Q075Z2 132 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 FDCSPQ8NFU4 85 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 USMG5Q96IX5 58 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 SPRR4Q96PI1 79 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 TPRP12270 2363 aaKnown RBP1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 VWFP04275 2813 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 COX6CP09669 75 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 MP68P56378 58 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 C6orf99Q4VX62 202 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 CLEC2BQ92478 149 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 TM2D3Q9BRN9 247 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 COL7A1Q02388 2944 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 WNK2Q9Y3S1 2297 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGLV7-46A0A075B6I9 117 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV3OR16-8A0A075B7F1 116 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV6-1A0A0B4J1U7 121 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 H3BQ85 93 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 M0R378 163 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 KRTAP12-2P59991 146 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 C9orf163Q8N9P6 203 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 DEFB104AQ8WTQ1 72 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 NCOR1O75376 2440 aa1.63□□□□□ -2.15
CDC42EP3-205ENST00000494083 ROS1P08922 2347 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 FAT1Q14517 4588 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 PIEZO1Q92508 2521 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV3-64A0A075B6Q5 118 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRAV41A0A0B4J266 112 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRBV10-1A0A0K0K1A3 114 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 LOC101927531A0A1B0GV80 90 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 hADV29S1A0JD25 119 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 MGPP08493 103 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 DYNC1H1Q14204 4646 aaKnown RBP1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 A6NN06 94 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 GNRH2O43555 120 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 NDUFC1O43677 76 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 PDE6GP18545 87 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 S100A4P26447 101 aaKnown RBP1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 CNBPP62633 177 aaKnown RBP1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 PRB3Q04118 309 aaPredicted RBP1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 PRR4Q16378 134 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 Q9BRP9 147 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 ZNF702PQ9H963 129 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 DYNLRB1Q9NP97 96 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 PRR34Q9NV39 138 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 BAHCC1Q9P281 2608 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 SMIM26A0A096LP01 95 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 RPL37AP8A6NKH3 93 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 NDUFB3O43676 98 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV3-11P01762 117 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV3-23P01764 117 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 HRCT1Q6UXD1 115 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 Q8N814 137 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 SMIM11BQ8TCY0 68 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 DSCR8Q96T75 97 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 RBM12B-AS1Q9P1G2 102 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 PHLDA3Q9Y5J5 127 aa1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 RP1L1Q8IWN7 2480 aaPredicted RBP1.62□□□□□ -2.15
CDC42EP3-205ENST00000494083 CEP250Q9BV73 2442 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 INAFM2P0DMQ5 153 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 XCL1P47992 114 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 C15orf32Q32M92 178 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 Q8IZM0 81 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV3-74A0A0B4J1X5 117 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRAV12-3A0A0B4J271 114 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV3-66A0A0C4DH42 116 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 M0R2N4 97 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 COX7A1P24310 79 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 LINC00575Q6W349 94 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 TMEM243Q9BU79 118 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 BIRC6Q9NR09 4857 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 MAP1BP46821 2468 aaKnown RBP1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 H0YGX0 51 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 MIFP14174 115 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms