RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TRAV12-1A0A0B4J245 112 aa5.72□□□□□ -1.49
UFD1-210ENST00000494054 A0A0U1RRA0 63 aa5.72□□□□□ -1.49
UFD1-210ENST00000494054 M0R378 163 aa5.72□□□□□ -1.49
UFD1-210ENST00000494054 RPL24P83731 157 aaKnown RBP5.72□□□□□ -1.49
UFD1-210ENST00000494054 IFI27L1Q96BM0 104 aa5.72□□□□□ -1.49
UFD1-210ENST00000494054 TMEM126AQ9H061 195 aa5.72□□□□□ -1.49
UFD1-210ENST00000494054 LINC00158P58513 81 aa5.71□□□□□ -1.5
UFD1-210ENST00000494054 SFTA2Q6UW10 78 aa5.71□□□□□ -1.5
UFD1-210ENST00000494054 FAM19A1Q7Z5A9 133 aa5.71□□□□□ -1.5
UFD1-210ENST00000494054 CBLN2Q8IUK8 224 aa5.71□□□□□ -1.5
UFD1-210ENST00000494054 FAM19A2Q8N3H0 131 aa5.71□□□□□ -1.5
UFD1-210ENST00000494054 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
UFD1-210ENST00000494054 MUC2Q02817 5179 aa5.71□□□□□ -1.5
UFD1-210ENST00000494054 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
UFD1-210ENST00000494054 SMIM13P0DJ93 91 aa5.69□□□□□ -1.5
UFD1-210ENST00000494054 FAM229BQ4G0N7 80 aa5.69□□□□□ -1.5
UFD1-210ENST00000494054 HSBP1O75506 76 aa5.68□□□□□ -1.5
UFD1-210ENST00000494054 LINC00310P59036 64 aa5.68□□□□□ -1.5
UFD1-210ENST00000494054 PLEKHB2Q96CS7 222 aa5.68□□□□□ -1.5
UFD1-210ENST00000494054 TRGC2P03986 189 aa5.67□□□□□ -1.5
UFD1-210ENST00000494054 BOD1L2Q8IYS8 172 aa5.67□□□□□ -1.5
UFD1-210ENST00000494054 MIR7-3HGQ8N6C7 128 aa5.67□□□□□ -1.5
UFD1-210ENST00000494054 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
UFD1-210ENST00000494054 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
UFD1-210ENST00000494054 IGKV2D-26A0A0A0MRZ7 120 aa5.66□□□□□ -1.5
UFD1-210ENST00000494054 H0Y8G0 127 aa5.66□□□□□ -1.5
UFD1-210ENST00000494054 SERF1AO75920 110 aa5.66□□□□□ -1.5
UFD1-210ENST00000494054 MEIG1Q5JSS6 88 aa5.66□□□□□ -1.5
UFD1-210ENST00000494054 C3orf22Q8N5N4 141 aa5.66□□□□□ -1.5
UFD1-210ENST00000494054 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
UFD1-210ENST00000494054 RETNLBQ9BQ08 111 aa5.66□□□□□ -1.5
UFD1-210ENST00000494054 HIGD2AQ9BW72 106 aa5.66□□□□□ -1.5
UFD1-210ENST00000494054 NDUFA12Q9UI09 145 aa5.66□□□□□ -1.5
UFD1-210ENST00000494054 ATP6V1G1O75348 118 aa5.65□□□□□ -1.5
UFD1-210ENST00000494054 LEPROTL1O95214 131 aa5.65□□□□□ -1.5
UFD1-210ENST00000494054 TSPEAR-AS2P59090 65 aa5.65□□□□□ -1.5
UFD1-210ENST00000494054 HERV-K104P63124 156 aa5.65□□□□□ -1.5
UFD1-210ENST00000494054 NCR3O14931 201 aa5.64□□□□□ -1.51
UFD1-210ENST00000494054 SLC7A5P1Q8MH63 180 aa5.64□□□□□ -1.51
UFD1-210ENST00000494054 SPRR4Q96PI1 79 aa5.64□□□□□ -1.51
UFD1-210ENST00000494054 PMCHL2Q9BQD1 86 aa5.64□□□□□ -1.51
UFD1-210ENST00000494054 MYMXA0A1B0GTQ4 84 aa5.63□□□□□ -1.51
UFD1-210ENST00000494054 COLCA2A8K830 154 aa5.63□□□□□ -1.51
UFD1-210ENST00000494054 PRYO14603 147 aa5.63□□□□□ -1.51
UFD1-210ENST00000494054 SPRR1AP35321 89 aa5.63□□□□□ -1.51
UFD1-210ENST00000494054 DAND5Q8N907 189 aa5.63□□□□□ -1.51
UFD1-210ENST00000494054 KCNQ1DNQ9H478 68 aa5.63□□□□□ -1.51
UFD1-210ENST00000494054 TRBV10-3A0A0K0K1G6 114 aa5.62□□□□□ -1.51
UFD1-210ENST00000494054 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
UFD1-210ENST00000494054 LEPROTO15243 131 aa5.62□□□□□ -1.51
UFD1-210ENST00000494054 FABP4P15090 132 aa5.62□□□□□ -1.51
UFD1-210ENST00000494054 LINC00337Q8N6G1 96 aa5.62□□□□□ -1.51
UFD1-210ENST00000494054 SMCR5Q8TEV8 140 aa5.62□□□□□ -1.51
UFD1-210ENST00000494054 LOC107984156A0A0G2JMH3 177 aa5.61□□□□□ -1.51
UFD1-210ENST00000494054 LINC00587B1AMM8 73 aa5.61□□□□□ -1.51
UFD1-210ENST00000494054 ARL17AQ8IVW1 177 aa5.61□□□□□ -1.51
UFD1-210ENST00000494054 MAP1LC3CQ9BXW4 147 aa5.61□□□□□ -1.51
UFD1-210ENST00000494054 J3QQQ9 107 aa5.6□□□□□ -1.51
UFD1-210ENST00000494054 DPM2O94777 84 aa5.6□□□□□ -1.51
UFD1-210ENST00000494054 PLNP26678 52 aa5.6□□□□□ -1.51
UFD1-210ENST00000494054 PPDPFQ9H3Y8 114 aa5.6□□□□□ -1.51
UFD1-210ENST00000494054 HSPB8Q9UJY1 196 aa5.6□□□□□ -1.51
UFD1-210ENST00000494054 ETDCA0A1B0GVM5 59 aa5.59□□□□□ -1.51
UFD1-210ENST00000494054 IGKCP01834 107 aa5.59□□□□□ -1.51
UFD1-210ENST00000494054 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.51
UFD1-210ENST00000494054 IGLV7-46A0A075B6I9 117 aa5.58□□□□□ -1.52
UFD1-210ENST00000494054 B5MCH6 92 aa5.58□□□□□ -1.52
UFD1-210ENST00000494054 EIF4EBP3O60516 100 aaPredicted RBP5.58□□□□□ -1.52
UFD1-210ENST00000494054 ERC2-IT1O76042 136 aa5.58□□□□□ -1.52
UFD1-210ENST00000494054 CTAG1AP78358 180 aa5.58□□□□□ -1.52
UFD1-210ENST00000494054 TRBV10-2A0A0K0K1G8 114 aa5.57□□□□□ -1.52
UFD1-210ENST00000494054 LGALS3P17931 250 aaKnown RBP5.57□□□□□ -1.52
UFD1-210ENST00000494054 DDTP30046 118 aa5.57□□□□□ -1.52
UFD1-210ENST00000494054 NMUP48645 174 aa5.57□□□□□ -1.52
UFD1-210ENST00000494054 HERVK_113P61574 105 aa5.57□□□□□ -1.52
UFD1-210ENST00000494054 ADAMTSL4-AS1Q5T5F5 129 aa5.57□□□□□ -1.52
UFD1-210ENST00000494054 SOSTDC1Q6X4U4 206 aa5.57□□□□□ -1.52
UFD1-210ENST00000494054 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
UFD1-210ENST00000494054 A0A0J9YXY3 114 aa5.56□□□□□ -1.52
UFD1-210ENST00000494054 TPRXLQ17RH7 258 aa5.56□□□□□ -1.52
UFD1-210ENST00000494054 LINC00483Q53H64 154 aa5.56□□□□□ -1.52
UFD1-210ENST00000494054 GAGE2AQ6NT46 116 aa5.56□□□□□ -1.52
UFD1-210ENST00000494054 SPAG11AQ6PDA7 123 aa5.56□□□□□ -1.52
UFD1-210ENST00000494054 Q8NBF4 154 aa5.56□□□□□ -1.52
UFD1-210ENST00000494054 Q9BRP9 147 aa5.56□□□□□ -1.52
UFD1-210ENST00000494054 E9PLD3 99 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST1H2BKO60814 126 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 NDUFC2O95298 119 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 IGLV6-57P01721 117 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST1H2BJP06899 126 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST1H2BOP23527 126 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST1H2BBP33778 126 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST1H2BDP58876 126 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 NPC2P61916 151 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST1H2BCP62807 126 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST2H2BEQ16778 126 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST1H2BHQ93079 126 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST1H2BNQ99877 126 aa5.55□□□□□ -1.52
UFD1-210ENST00000494054 HIST1H2BMQ99879 126 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms