RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 PRB4P10163 310 aaPredicted RBP2.47□□□□□ -2.01
SMG7-208ENST00000493609 JOSD1Q15040 202 aaPredicted RBP2.47□□□□□ -2.01
SMG7-208ENST00000493609 VAMP3Q15836 100 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 PMCHL1Q16048 86 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 FAM74A4Q5TZK3 123 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 LINC01545Q5VT33 79 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 LGALS9CQ6DKI2 356 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 SBSPONQ8IVN8 264 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 C15orf53Q8NAA6 179 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 TMEM141Q96I45 108 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 CYSLTR1Q9Y271 337 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 STARD9Q9P2P6 4700 aa2.47□□□□□ -2.01
SMG7-208ENST00000493609 COL7A1Q02388 2944 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 CSMD3Q7Z407 3707 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 TRAV8-3A0A0A6YYJ7 113 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 TRAV26-2A0A0B4J265 109 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 A0A1W2PNM2 257 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 C20orf202A1L168 122 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 IGIPA6NJ69 53 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 PSCAO43653 123 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 IFI27P40305 119 aaPredicted RBP2.46□□□□□ -2.02
SMG7-208ENST00000493609 NDUFA6P56556 154 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 DAD1P61803 113 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 COTL1Q14019 142 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 RPL39LQ96EH5 51 aaKnown RBP2.46□□□□□ -2.02
SMG7-208ENST00000493609 DNAH1Q9P2D7 4330 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 FBN3Q75N90 2809 aa2.46□□□□□ -2.02
SMG7-208ENST00000493609 PLECQ15149 4684 aaKnown RBP2.45□□□□□ -2.02
SMG7-208ENST00000493609 TRBV25-1A0A075B6N4 114 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 TRBV6-8A0A0A6YYG3 113 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 TRAV10A0A0B4J240 114 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 TRGV4A0A0C4DH28 118 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 MUC21A0A0G2JKD1 596 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 MUC21A0A140T8X8 626 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 A0A1B0GU33 70 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 SYS1-DBNDD2H3BUS1 97 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 NUPR1O60356 82 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 C3orf79P0CE67 100 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 P0DMU3 169 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 FAM231AP0DMU4 169 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 FAM231CP0DMU5 169 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 FABP4P15090 132 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 PLNP26678 52 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 C12orf74Q32Q52 190 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 PYY3Q5JQD4 70 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 IFI27L1Q96BM0 104 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 AMELXQ99217 191 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 UPK3BQ9BT76 320 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 HIGD2AQ9BW72 106 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 HHLA3Q9XRX5 114 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 UBE2D4Q9Y2X8 147 aa2.45□□□□□ -2.02
SMG7-208ENST00000493609 NBEAL2Q6ZNJ1 2754 aa2.44□□□□□ -2.02
SMG7-208ENST00000493609 A0A087WX48 190 aa2.44□□□□□ -2.02
SMG7-208ENST00000493609 F8VRH5 84 aa2.44□□□□□ -2.02
SMG7-208ENST00000493609 IGLC3P0DOY3 106 aa2.44□□□□□ -2.02
SMG7-208ENST00000493609 HTN1P15515 57 aa2.44□□□□□ -2.02
SMG7-208ENST00000493609 SEC11AP67812 179 aa2.44□□□□□ -2.02
SMG7-208ENST00000493609 LELP1Q5T871 98 aa2.44□□□□□ -2.02
SMG7-208ENST00000493609 OR10D4PQ8NGN7 298 aa2.44□□□□□ -2.02
SMG7-208ENST00000493609 ATP6V0E2Q8NHE4 81 aa2.44□□□□□ -2.02
SMG7-208ENST00000493609 A0A096LPF7 62 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 NUPR2A6NF83 97 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 C11orf86A6NJI1 115 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 PRM2P04554 102 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 DEFB130BP0DP73 79 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 DEFB130AP0DP74 79 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 S100A12P80511 92 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 LINC01556Q5JQF7 62 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 BOD1L2Q8IYS8 172 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 FAM19A2Q8N3H0 131 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 ZNRF2Q8NHG8 242 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 MRPS16Q9Y3D3 137 aaKnown RBP2.43□□□□□ -2.02
SMG7-208ENST00000493609 ALMS1Q8TCU4 4167 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 VPS13DQ5THJ4 4388 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 LYSTQ99698 3801 aa2.43□□□□□ -2.02
SMG7-208ENST00000493609 DEFB131BA0A096LNP1 70 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 TINCRA0A1B0GVN0 87 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 DLEU1O43261 78 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 ZNF73O43830 326 aaPredicted RBP2.42□□□□□ -2.02
SMG7-208ENST00000493609 DPM2O94777 84 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 FGF6P10767 208 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 FUSP35637 526 aaKnown RBP eCLIP2.42□□□□□ -2.02
SMG7-208ENST00000493609 UBE2D1P51668 147 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 HERVK_113P63121 156 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 OR5A1Q8NGJ0 315 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 SCGB3A1Q96QR1 104 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 C2orf88Q9BSF0 95 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 CDC42SE2Q9NRR3 84 aa2.42□□□□□ -2.02
SMG7-208ENST00000493609 IGHV3-73A0A0B4J1V6 119 aa2.41□□□□□ -2.02
SMG7-208ENST00000493609 UBE2L6O14933 153 aa2.41□□□□□ -2.02
SMG7-208ENST00000493609 IGKCP01834 107 aa2.41□□□□□ -2.02
SMG7-208ENST00000493609 ZNF22P17026 224 aaPredicted RBP2.41□□□□□ -2.02
SMG7-208ENST00000493609 EMP1P54849 157 aa2.41□□□□□ -2.02
SMG7-208ENST00000493609 RPL39P62891 51 aaKnown RBP2.41□□□□□ -2.02
SMG7-208ENST00000493609 Q6ZUT4 128 aa2.41□□□□□ -2.02
SMG7-208ENST00000493609 C10orf126Q8N4M7 172 aa2.41□□□□□ -2.02
SMG7-208ENST00000493609 C12orf57Q99622 126 aa2.41□□□□□ -2.02
SMG7-208ENST00000493609 PMCHL2Q9BQD1 86 aa2.41□□□□□ -2.02
SMG7-208ENST00000493609 CST9LQ9H4G1 147 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms