RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 A0A096LNJ9 63 aa11.95□□□□□ -0.5
PHTF1-212ENST00000493212 URB1-AS1Q96HZ7 61 aa11.95□□□□□ -0.5
PHTF1-212ENST00000493212 IGKV2D-26A0A0A0MRZ7 120 aa11.94□□□□□ -0.5
PHTF1-212ENST00000493212 TMEM238C9JI98 176 aa11.94□□□□□ -0.5
PHTF1-212ENST00000493212 M0R378 163 aa11.94□□□□□ -0.5
PHTF1-212ENST00000493212 ZNF22P17026 224 aaPredicted RBP11.94□□□□□ -0.5
PHTF1-212ENST00000493212 S100A1P23297 94 aa11.94□□□□□ -0.5
PHTF1-212ENST00000493212 NDUFA6P56556 154 aa11.94□□□□□ -0.5
PHTF1-212ENST00000493212 Q8NDZ9 215 aa11.94□□□□□ -0.5
PHTF1-212ENST00000493212 ERG28Q9UKR5 140 aa11.94□□□□□ -0.5
PHTF1-212ENST00000493212 FAM19A1Q7Z5A9 133 aa11.93□□□□□ -0.5
PHTF1-212ENST00000493212 COX17Q14061 63 aa11.92□□□□□ -0.5
PHTF1-212ENST00000493212 PLEKHB2Q96CS7 222 aa11.92□□□□□ -0.5
PHTF1-212ENST00000493212 HBDP02042 147 aa11.9□□□□□ -0.5
PHTF1-212ENST00000493212 RPL24P83731 157 aaKnown RBP11.9□□□□□ -0.5
PHTF1-212ENST00000493212 SFTA2Q6UW10 78 aa11.9□□□□□ -0.5
PHTF1-212ENST00000493212 CHCHD1Q96BP2 118 aaKnown RBP11.9□□□□□ -0.5
PHTF1-212ENST00000493212 IGLV7-46A0A075B6I9 117 aa11.89□□□□□ -0.51
PHTF1-212ENST00000493212 CDIP1Q9H305 208 aa11.89□□□□□ -0.51
PHTF1-212ENST00000493212 BAGE3Q86Y29 109 aa11.88□□□□□ -0.51
PHTF1-212ENST00000493212 C3orf22Q8N5N4 141 aa11.88□□□□□ -0.51
PHTF1-212ENST00000493212 ZNF625Q96I27 306 aaPredicted RBP11.87□□□□□ -0.51
PHTF1-212ENST00000493212 PMCHL1Q16048 86 aa11.86□□□□□ -0.51
PHTF1-212ENST00000493212 C11orf86A6NJI1 115 aa11.84□□□□□ -0.51
PHTF1-212ENST00000493212 HSBP1O75506 76 aa11.83□□□□□ -0.52
PHTF1-212ENST00000493212 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
PHTF1-212ENST00000493212 SPRR4Q96PI1 79 aa11.82□□□□□ -0.52
PHTF1-212ENST00000493212 HIGD2AQ9BW72 106 aa11.82□□□□□ -0.52
PHTF1-212ENST00000493212 PPDPFQ9H3Y8 114 aa11.82□□□□□ -0.52
PHTF1-212ENST00000493212 SPAG11AQ6PDA7 123 aa11.81□□□□□ -0.52
PHTF1-212ENST00000493212 SERF1AO75920 110 aa11.8□□□□□ -0.52
PHTF1-212ENST00000493212 LINC00310P59036 64 aa11.79□□□□□ -0.52
PHTF1-212ENST00000493212 HIST1H2BKO60814 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST1H2BJP06899 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST1H2BOP23527 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST1H2BBP33778 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST1H2BDP58876 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST1H2BCP62807 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST2H2BEQ16778 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.77□□□□□ -0.53
PHTF1-212ENST00000493212 FAM19A2Q8N3H0 131 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST1H2BHQ93079 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST1H2BNQ99877 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 HIST1H2BMQ99879 126 aa11.77□□□□□ -0.53
PHTF1-212ENST00000493212 CHTOPQ9Y3Y2 248 aaKnown RBP11.77□□□□□ -0.53
PHTF1-212ENST00000493212 LINC00158P58513 81 aa11.76□□□□□ -0.53
PHTF1-212ENST00000493212 FP248Q71RG6 208 aaPredicted RBP11.76□□□□□ -0.53
PHTF1-212ENST00000493212 IFI27L1Q96BM0 104 aa11.75□□□□□ -0.53
PHTF1-212ENST00000493212 TMEM223A0PJW6 202 aa11.74□□□□□ -0.53
PHTF1-212ENST00000493212 SPRR1AP35321 89 aa11.74□□□□□ -0.53
PHTF1-212ENST00000493212 KRTAP4-16G5E9R7 235 aaPredicted RBP11.73□□□□□ -0.53
PHTF1-212ENST00000493212 PRYO14603 147 aa11.73□□□□□ -0.53
PHTF1-212ENST00000493212 LEPROTL1O95214 131 aa11.73□□□□□ -0.53
PHTF1-212ENST00000493212 ZNF706Q9Y5V0 76 aaPredicted RBP11.73□□□□□ -0.53
PHTF1-212ENST00000493212 TRAV12-1A0A0B4J245 112 aa11.72□□□□□ -0.53
PHTF1-212ENST00000493212 A0A0U1RRA0 63 aa11.72□□□□□ -0.53
PHTF1-212ENST00000493212 KRTAP13-3Q3SY46 172 aa11.72□□□□□ -0.53
PHTF1-212ENST00000493212 LINC00337Q8N6G1 96 aa11.72□□□□□ -0.53
PHTF1-212ENST00000493212 KCNQ1DNQ9H478 68 aa11.71□□□□□ -0.53
PHTF1-212ENST00000493212 LINC00587B1AMM8 73 aa11.7□□□□□ -0.54
PHTF1-212ENST00000493212 DAND5Q8N907 189 aa11.7□□□□□ -0.54
PHTF1-212ENST00000493212 Q8NBF4 154 aa11.7□□□□□ -0.54
PHTF1-212ENST00000493212 HSPB8Q9UJY1 196 aa11.7□□□□□ -0.54
PHTF1-212ENST00000493212 SMIM13P0DJ93 91 aa11.69□□□□□ -0.54
PHTF1-212ENST00000493212 KRTAP9-6A0A140TA67 174 aa11.68□□□□□ -0.54
PHTF1-212ENST00000493212 C4orf48Q5BLP8 95 aa11.68□□□□□ -0.54
PHTF1-212ENST00000493212 BOD1L2Q8IYS8 172 aa11.68□□□□□ -0.54
PHTF1-212ENST00000493212 SMCR5Q8TEV8 140 aa11.68□□□□□ -0.54
PHTF1-212ENST00000493212 FABP4P15090 132 aa11.67□□□□□ -0.54
PHTF1-212ENST00000493212 HERV-K104P63124 156 aa11.67□□□□□ -0.54
PHTF1-212ENST00000493212 ASB16-AS1Q495Z4 193 aa11.67□□□□□ -0.54
PHTF1-212ENST00000493212 LINC00483Q53H64 154 aa11.67□□□□□ -0.54
PHTF1-212ENST00000493212 MEIG1Q5JSS6 88 aa11.67□□□□□ -0.54
PHTF1-212ENST00000493212 COA6Q5JTJ3 125 aaKnown RBP11.67□□□□□ -0.54
PHTF1-212ENST00000493212 NCR3O14931 201 aa11.66□□□□□ -0.54
PHTF1-212ENST00000493212 MIR7-3HGQ8N6C7 128 aa11.66□□□□□ -0.54
PHTF1-212ENST00000493212 SPINK1P00995 79 aa11.65□□□□□ -0.54
PHTF1-212ENST00000493212 S100A12P80511 92 aa11.64□□□□□ -0.55
PHTF1-212ENST00000493212 MAP1LC3CQ9BXW4 147 aa11.64□□□□□ -0.55
PHTF1-212ENST00000493212 TRBV10-3A0A0K0K1G6 114 aa11.63□□□□□ -0.55
PHTF1-212ENST00000493212 H0Y8G0 127 aa11.63□□□□□ -0.55
PHTF1-212ENST00000493212 ETDCA0A1B0GVM5 59 aa11.62□□□□□ -0.55
PHTF1-212ENST00000493212 KRTAP4-1Q9BYQ7 146 aa11.62□□□□□ -0.55
PHTF1-212ENST00000493212 MYMXA0A1B0GTQ4 84 aa11.61□□□□□ -0.55
PHTF1-212ENST00000493212 B5MCH6 92 aa11.6□□□□□ -0.55
PHTF1-212ENST00000493212 NDUFA12Q9UI09 145 aa11.6□□□□□ -0.55
PHTF1-212ENST00000493212 LOC107984156A0A0G2JMH3 177 aa11.59□□□□□ -0.55
PHTF1-212ENST00000493212 RPS29P62273 56 aaKnown RBP11.59□□□□□ -0.55
PHTF1-212ENST00000493212 ARL17AQ8IVW1 177 aa11.59□□□□□ -0.55
PHTF1-212ENST00000493212 ERC2-IT1O76042 136 aa11.58□□□□□ -0.56
PHTF1-212ENST00000493212 GAGE2AQ6NT46 116 aa11.58□□□□□ -0.56
PHTF1-212ENST00000493212 PLNP26678 52 aa11.57□□□□□ -0.56
PHTF1-212ENST00000493212 Q8N377 158 aa11.57□□□□□ -0.56
PHTF1-212ENST00000493212 DPM2O94777 84 aa11.56□□□□□ -0.56
PHTF1-212ENST00000493212 MOBPQ13875 183 aa11.56□□□□□ -0.56
PHTF1-212ENST00000493212 Q9BRP9 147 aa11.56□□□□□ -0.56
PHTF1-212ENST00000493212 SYS1-DBNDD2H3BUS1 97 aa11.55□□□□□ -0.56
PHTF1-212ENST00000493212 TSPEAR-AS2P59090 65 aa11.55□□□□□ -0.56
PHTF1-212ENST00000493212 SSBP3-AS1Q7Z2R9 100 aa11.55□□□□□ -0.56
PHTF1-212ENST00000493212 TRBV10-2A0A0K0K1G8 114 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms