RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 C7orf33Q8WU49 177 aa8.85□□□□□ -0.99
MMP11-213ENST00000493132 SPANXB1Q9NS25 103 aaPredicted RBP8.85□□□□□ -0.99
MMP11-213ENST00000493132 LINC00474Q9P2X8 69 aa8.85□□□□□ -0.99
MMP11-213ENST00000493132 PTTG1IPP53801 180 aa8.84□□□□□ -0.99
MMP11-213ENST00000493132 BATFQ16520 125 aa8.84□□□□□ -0.99
MMP11-213ENST00000493132 COL5A1-AS1Q5SY13 56 aa8.84□□□□□ -0.99
MMP11-213ENST00000493132 NDUFA12Q9UI09 145 aa8.84□□□□□ -0.99
MMP11-213ENST00000493132 SCGB1D4Q6XE38 83 aa8.83□□□□□ -1
MMP11-213ENST00000493132 TOMM7Q9P0U1 55 aa8.83□□□□□ -1
MMP11-213ENST00000493132 A0A0J9YXY3 114 aa8.82□□□□□ -1
MMP11-213ENST00000493132 C10orf25Q5T742 122 aa8.82□□□□□ -1
MMP11-213ENST00000493132 UNQ6190/PRO20217Q6UXQ8 127 aa8.82□□□□□ -1
MMP11-213ENST00000493132 CEND1Q8N111 149 aa8.82□□□□□ -1
MMP11-213ENST00000493132 PKHD1L1Q86WI1 4243 aa8.82□□□□□ -1
MMP11-213ENST00000493132 J3QL48 77 aa8.81□□□□□ -1
MMP11-213ENST00000493132 PRSS2P07478 247 aa8.81□□□□□ -1
MMP11-213ENST00000493132 C2orf82Q6UX34 121 aa8.81□□□□□ -1
MMP11-213ENST00000493132 ZNF625Q96I27 306 aaPredicted RBP8.81□□□□□ -1
MMP11-213ENST00000493132 LITAFQ99732 161 aa8.81□□□□□ -1
MMP11-213ENST00000493132 C6orf48Q9UBA6 75 aa8.81□□□□□ -1
MMP11-213ENST00000493132 TIMM17BO60830 172 aa8.8□□□□□ -1
MMP11-213ENST00000493132 FXYD2P54710 66 aa8.8□□□□□ -1
MMP11-213ENST00000493132 HIST1H4GQ99525 98 aa8.8□□□□□ -1
MMP11-213ENST00000493132 F8WDY8 70 aa8.79□□□□□ -1
MMP11-213ENST00000493132 KIAA0087Q14695 138 aa8.79□□□□□ -1
MMP11-213ENST00000493132 RNF151Q2KHN1 245 aa8.79□□□□□ -1
MMP11-213ENST00000493132 COX7B2Q8TF08 81 aa8.79□□□□□ -1
MMP11-213ENST00000493132 A6NDN8 102 aa8.78□□□□□ -1
MMP11-213ENST00000493132 TMEM238C9JI98 176 aa8.78□□□□□ -1
MMP11-213ENST00000493132 CKS1BP61024 79 aa8.78□□□□□ -1
MMP11-213ENST00000493132 HERV-K104P63124 156 aa8.78□□□□□ -1
MMP11-213ENST00000493132 SPANXDQ9BXN6 97 aa8.78□□□□□ -1
MMP11-213ENST00000493132 SPANXCQ9NY87 97 aa8.78□□□□□ -1
MMP11-213ENST00000493132 A0A1B0GWB2 263 aa8.77□□□□□ -1.01
MMP11-213ENST00000493132 GAGE2EQ4V326 116 aa8.77□□□□□ -1.01
MMP11-213ENST00000493132 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
MMP11-213ENST00000493132 Q8IZM0 81 aa8.77□□□□□ -1.01
MMP11-213ENST00000493132 GAGE2DQ9UEU5 116 aa8.77□□□□□ -1.01
MMP11-213ENST00000493132 A0A1W2PNN7 141 aa8.76□□□□□ -1.01
MMP11-213ENST00000493132 TAX1BP3O14907 124 aa8.76□□□□□ -1.01
MMP11-213ENST00000493132 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
MMP11-213ENST00000493132 SRSF9Q13242 221 aaKnown RBP eCLIP8.76□□□□□ -1.01
MMP11-213ENST00000493132 C6orf226Q5I0X4 101 aa8.76□□□□□ -1.01
MMP11-213ENST00000493132 SFTA2Q6UW10 78 aa8.76□□□□□ -1.01
MMP11-213ENST00000493132 Q6ZRP5 223 aa8.76□□□□□ -1.01
MMP11-213ENST00000493132 Q6ZVH6 145 aa8.76□□□□□ -1.01
MMP11-213ENST00000493132 TRBV30A0A0K0K1B3 111 aa8.75□□□□□ -1.01
MMP11-213ENST00000493132 A0A1B0GV90 55 aa8.75□□□□□ -1.01
MMP11-213ENST00000493132 FAM19A5Q7Z5A7 132 aaPredicted RBP8.75□□□□□ -1.01
MMP11-213ENST00000493132 FAM168BA1KXE4 195 aa8.74□□□□□ -1.01
MMP11-213ENST00000493132 ADAMTSL4-AS1Q5T5F5 129 aa8.74□□□□□ -1.01
MMP11-213ENST00000493132 HERC1Q15751 4861 aa8.73□□□□□ -1.01
MMP11-213ENST00000493132 TMEM238LA0A1B0GVL6 79 aa8.73□□□□□ -1.01
MMP11-213ENST00000493132 A6NJY4 79 aa8.73□□□□□ -1.01
MMP11-213ENST00000493132 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
MMP11-213ENST00000493132 TLX1NBP0CAT3 122 aa8.73□□□□□ -1.01
MMP11-213ENST00000493132 PHF5AQ7RTV0 110 aaKnown RBP8.73□□□□□ -1.01
MMP11-213ENST00000493132 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
MMP11-213ENST00000493132 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
MMP11-213ENST00000493132 NDUFC2-KCTD14E9PQ53 114 aa8.72□□□□□ -1.01
MMP11-213ENST00000493132 CXCL5P42830 114 aa8.72□□□□□ -1.01
MMP11-213ENST00000493132 NHP2Q9NX24 153 aaKnown RBP8.72□□□□□ -1.01
MMP11-213ENST00000493132 FAT3Q8TDW7 4589 aa8.71□□□□□ -1.01
MMP11-213ENST00000493132 IFITM1P13164 125 aa8.71□□□□□ -1.02
MMP11-213ENST00000493132 SMIM13P0DJ93 91 aa8.7□□□□□ -1.02
MMP11-213ENST00000493132 RPL24P83731 157 aaKnown RBP8.7□□□□□ -1.02
MMP11-213ENST00000493132 MUSTN1Q8IVN3 82 aa8.7□□□□□ -1.02
MMP11-213ENST00000493132 K7ERJ3 54 aa8.69□□□□□ -1.02
MMP11-213ENST00000493132 M0QXV9 152 aa8.69□□□□□ -1.02
MMP11-213ENST00000493132 OXTP01178 125 aa8.69□□□□□ -1.02
MMP11-213ENST00000493132 MEIG1Q5JSS6 88 aa8.69□□□□□ -1.02
MMP11-213ENST00000493132 A4D1N5 150 aa8.68□□□□□ -1.02
MMP11-213ENST00000493132 C9orf118A6NHY6 69 aa8.68□□□□□ -1.02
MMP11-213ENST00000493132 C9orf129Q5T035 196 aaKnown RBP8.68□□□□□ -1.02
MMP11-213ENST00000493132 XAGE1AQ9HD64 81 aa8.68□□□□□ -1.02
MMP11-213ENST00000493132 A0A0B4J2C4 111 aa8.67□□□□□ -1.02
MMP11-213ENST00000493132 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
MMP11-213ENST00000493132 CFC1BP0CG36 223 aa8.67□□□□□ -1.02
MMP11-213ENST00000493132 CFC1P0CG37 223 aa8.67□□□□□ -1.02
MMP11-213ENST00000493132 LINC00308Q8TCZ7 52 aa8.67□□□□□ -1.02
MMP11-213ENST00000493132 PSORS1C2Q9UIG4 136 aa8.67□□□□□ -1.02
MMP11-213ENST00000493132 ERG28Q9UKR5 140 aa8.67□□□□□ -1.02
MMP11-213ENST00000493132 UBE2BP63146 152 aa8.66□□□□□ -1.02
MMP11-213ENST00000493132 SOSTDC1Q6X4U4 206 aa8.66□□□□□ -1.02
MMP11-213ENST00000493132 DAND5Q8N907 189 aa8.66□□□□□ -1.02
MMP11-213ENST00000493132 COPS9Q8WXC6 57 aa8.66□□□□□ -1.02
MMP11-213ENST00000493132 C1orf137Q5JT78 98 aa8.65□□□□□ -1.02
MMP11-213ENST00000493132 RAB37Q96AX2 223 aa8.65□□□□□ -1.02
MMP11-213ENST00000493132 COX17Q14061 63 aa8.64□□□□□ -1.03
MMP11-213ENST00000493132 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
MMP11-213ENST00000493132 MIR7-3HGQ8N6C7 128 aa8.64□□□□□ -1.03
MMP11-213ENST00000493132 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
MMP11-213ENST00000493132 H3BUT2 72 aa8.63□□□□□ -1.03
MMP11-213ENST00000493132 SERTAD4-AS1Q5TG53 156 aa8.63□□□□□ -1.03
MMP11-213ENST00000493132 LOC107984156A0A0G2JMH3 177 aa8.62□□□□□ -1.03
MMP11-213ENST00000493132 LINC00158P58513 81 aa8.62□□□□□ -1.03
MMP11-213ENST00000493132 NPC2P61916 151 aa8.62□□□□□ -1.03
MMP11-213ENST00000493132 SPINK6Q6UWN8 80 aa8.62□□□□□ -1.03
MMP11-213ENST00000493132 KRTAP11-1Q8IUC1 163 aa8.62□□□□□ -1.03
MMP11-213ENST00000493132 ARL17AQ8IVW1 177 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms