RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
PTPN7-216ENST00000492977 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
PTPN7-216ENST00000492977 C6orf48Q9UBA6 75 aa9.33□□□□□ -0.92
PTPN7-216ENST00000492977 LST1O00453 97 aa9.32□□□□□ -0.92
PTPN7-216ENST00000492977 APLNQ9ULZ1 77 aa9.32□□□□□ -0.92
PTPN7-216ENST00000492977 C9JAW5 83 aa9.31□□□□□ -0.92
PTPN7-216ENST00000492977 ETDBQ3ZM63 59 aa9.31□□□□□ -0.92
PTPN7-216ENST00000492977 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
PTPN7-216ENST00000492977 SLC25A20O43772 301 aa9.3□□□□□ -0.92
PTPN7-216ENST00000492977 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
PTPN7-216ENST00000492977 OR13C6PQ8NH95 151 aa9.29□□□□□ -0.92
PTPN7-216ENST00000492977 SMIM11BQ8TCY0 68 aa9.29□□□□□ -0.92
PTPN7-216ENST00000492977 TRBV10-2A0A0K0K1G8 114 aa9.29□□□□□ -0.92
PTPN7-216ENST00000492977 NUPR2A6NF83 97 aa9.28□□□□□ -0.92
PTPN7-216ENST00000492977 KRTAP21-3Q3LHN1 58 aa9.28□□□□□ -0.92
PTPN7-216ENST00000492977 Q6ZRU5 148 aa9.28□□□□□ -0.92
PTPN7-216ENST00000492977 DNAH9Q9NYC9 4486 aa9.27□□□□□ -0.93
PTPN7-216ENST00000492977 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.93
PTPN7-216ENST00000492977 TEN1Q86WV5 123 aa9.27□□□□□ -0.93
PTPN7-216ENST00000492977 ANKRD29Q8N6D5 301 aa9.27□□□□□ -0.93
PTPN7-216ENST00000492977 TMEM126AQ9H061 195 aa9.27□□□□□ -0.93
PTPN7-216ENST00000492977 H0YGX0 51 aa9.26□□□□□ -0.93
PTPN7-216ENST00000492977 SYCNQ0VAF6 134 aa9.26□□□□□ -0.93
PTPN7-216ENST00000492977 UBE2DNLQ8IWF7 75 aa9.26□□□□□ -0.93
PTPN7-216ENST00000492977 STAB2Q8WWQ8 2551 aa9.26□□□□□ -0.93
PTPN7-216ENST00000492977 TRACP01848 142 aa9.25□□□□□ -0.93
PTPN7-216ENST00000492977 COL7A1Q02388 2944 aa9.25□□□□□ -0.93
PTPN7-216ENST00000492977 NDUFC2-KCTD14E9PQ53 114 aa9.24□□□□□ -0.93
PTPN7-216ENST00000492977 H3BT86 120 aa9.24□□□□□ -0.93
PTPN7-216ENST00000492977 J3QR89 54 aa9.24□□□□□ -0.93
PTPN7-216ENST00000492977 Q8NDZ9 215 aa9.24□□□□□ -0.93
PTPN7-216ENST00000492977 CARD19Q96LW7 228 aa9.24□□□□□ -0.93
PTPN7-216ENST00000492977 USP17L23D6RBM5 183 aa9.24□□□□□ -0.93
PTPN7-216ENST00000492977 NCR3O14931 201 aa9.23□□□□□ -0.93
PTPN7-216ENST00000492977 PPDPFLQ8WWR9 84 aa9.23□□□□□ -0.93
PTPN7-216ENST00000492977 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
PTPN7-216ENST00000492977 FAM218AQ96MZ4 157 aa9.22□□□□□ -0.93
PTPN7-216ENST00000492977 XAGE1AQ9HD64 81 aa9.22□□□□□ -0.93
PTPN7-216ENST00000492977 CASC10Q5T4H9 136 aa9.21□□□□□ -0.93
PTPN7-216ENST00000492977 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.93
PTPN7-216ENST00000492977 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
PTPN7-216ENST00000492977 TLX1NBP0CAT3 122 aa9.2□□□□□ -0.94
PTPN7-216ENST00000492977 KRTAP1-5Q9BYS1 174 aa9.2□□□□□ -0.94
PTPN7-216ENST00000492977 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
PTPN7-216ENST00000492977 RPL18AQ02543 176 aaKnown RBP9.19□□□□□ -0.94
PTPN7-216ENST00000492977 Q6ZRP5 223 aa9.19□□□□□ -0.94
PTPN7-216ENST00000492977 SLPIP03973 132 aa9.18□□□□□ -0.94
PTPN7-216ENST00000492977 VPREB1P12018 145 aa9.18□□□□□ -0.94
PTPN7-216ENST00000492977 GAGE2EQ4V326 116 aa9.18□□□□□ -0.94
PTPN7-216ENST00000492977 GAGE2DQ9UEU5 116 aa9.18□□□□□ -0.94
PTPN7-216ENST00000492977 A0A1B0GX51 115 aa9.17□□□□□ -0.94
PTPN7-216ENST00000492977 A0A087WYN8 130 aa9.16□□□□□ -0.94
PTPN7-216ENST00000492977 DNAL4O96015 105 aa9.16□□□□□ -0.94
PTPN7-216ENST00000492977 BAALC-AS2P0C853 105 aa9.16□□□□□ -0.94
PTPN7-216ENST00000492977 TTC32Q5I0X7 151 aa9.16□□□□□ -0.94
PTPN7-216ENST00000492977 M0R378 163 aa9.16□□□□□ -0.94
PTPN7-216ENST00000492977 DYNC2H1Q8NCM8 4307 aaKnown RBP9.15□□□□□ -0.94
PTPN7-216ENST00000492977 PSCAO43653 123 aa9.15□□□□□ -0.95
PTPN7-216ENST00000492977 C6orf99Q4VX62 202 aa9.15□□□□□ -0.95
PTPN7-216ENST00000492977 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
PTPN7-216ENST00000492977 LECT2O14960 151 aa9.14□□□□□ -0.95
PTPN7-216ENST00000492977 C9orf129Q5T035 196 aaKnown RBP9.14□□□□□ -0.95
PTPN7-216ENST00000492977 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
PTPN7-216ENST00000492977 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
PTPN7-216ENST00000492977 SNCGO76070 127 aa9.13□□□□□ -0.95
PTPN7-216ENST00000492977 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
PTPN7-216ENST00000492977 DNHD1Q96M86 4753 aa9.12□□□□□ -0.95
PTPN7-216ENST00000492977 TRAV23DV6A0A075B6W5 121 aa9.12□□□□□ -0.95
PTPN7-216ENST00000492977 Q8N814 137 aa9.12□□□□□ -0.95
PTPN7-216ENST00000492977 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
PTPN7-216ENST00000492977 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
PTPN7-216ENST00000492977 DNAH1Q9P2D7 4330 aa9.11□□□□□ -0.95
PTPN7-216ENST00000492977 CNBPP62633 177 aaKnown RBP9.1□□□□□ -0.95
PTPN7-216ENST00000492977 LINC00575Q6W349 94 aa9.1□□□□□ -0.95
PTPN7-216ENST00000492977 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
PTPN7-216ENST00000492977 TRBV7-6A0A0J9YX20 115 aa9.09□□□□□ -0.95
PTPN7-216ENST00000492977 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.95
PTPN7-216ENST00000492977 NKAPP1Q8N9T2 125 aa9.09□□□□□ -0.95
PTPN7-216ENST00000492977 ORMDL1Q9P0S3 153 aa9.09□□□□□ -0.95
PTPN7-216ENST00000492977 C22orf24Q9Y442 160 aa9.09□□□□□ -0.95
PTPN7-216ENST00000492977 PRKDCP78527 4128 aaKnown RBP9.09□□□□□ -0.95
PTPN7-216ENST00000492977 IGLV5-37A0A075B6J1 123 aa9.08□□□□□ -0.96
PTPN7-216ENST00000492977 SIGMAR1Q99720 223 aa9.08□□□□□ -0.96
PTPN7-216ENST00000492977 CSMD3Q7Z407 3707 aa9.07□□□□□ -0.96
PTPN7-216ENST00000492977 hADV29S1A0JD25 119 aa9.07□□□□□ -0.96
PTPN7-216ENST00000492977 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
PTPN7-216ENST00000492977 SERTAD4-AS1Q5TG53 156 aa9.07□□□□□ -0.96
PTPN7-216ENST00000492977 MEGF8Q7Z7M0 2845 aa9.06□□□□□ -0.96
PTPN7-216ENST00000492977 DNAH7Q8WXX0 4024 aa9.05□□□□□ -0.96
PTPN7-216ENST00000492977 COX7BP24311 80 aa9.05□□□□□ -0.96
PTPN7-216ENST00000492977 LRCOL1A6NCL2 159 aa9.04□□□□□ -0.96
PTPN7-216ENST00000492977 TMEM256-PLSCR3K7ERE1 68 aa9.04□□□□□ -0.96
PTPN7-216ENST00000492977 INAFM2P0DMQ5 153 aa9.04□□□□□ -0.96
PTPN7-216ENST00000492977 ELOF1P60002 83 aaKnown RBP9.04□□□□□ -0.96
PTPN7-216ENST00000492977 Q6ZRN7 208 aaPredicted RBP9.04□□□□□ -0.96
PTPN7-216ENST00000492977 C7orf33Q8WU49 177 aa9.04□□□□□ -0.96
PTPN7-216ENST00000492977 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
PTPN7-216ENST00000492977 A0A1B0GV72 72 aa9.03□□□□□ -0.96
PTPN7-216ENST00000492977 C16orf90A8MZG2 172 aa9.03□□□□□ -0.96
PTPN7-216ENST00000492977 H3BQ85 93 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms