RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 LST1O00453 97 aa9.34□□□□□ -0.91
PDZRN3-210ENST00000492909 CXCL5P42830 114 aa9.34□□□□□ -0.91
PDZRN3-210ENST00000492909 CKS1BP61024 79 aa9.34□□□□□ -0.91
PDZRN3-210ENST00000492909 NTN5Q8WTR8 489 aaPredicted RBP9.34□□□□□ -0.91
PDZRN3-210ENST00000492909 H3BT86 120 aa9.33□□□□□ -0.92
PDZRN3-210ENST00000492909 MEIG1Q5JSS6 88 aa9.33□□□□□ -0.92
PDZRN3-210ENST00000492909 HYDINQ4G0P3 5121 aa9.33□□□□□ -0.92
PDZRN3-210ENST00000492909 DNAH1Q9P2D7 4330 aa9.33□□□□□ -0.92
PDZRN3-210ENST00000492909 SACSQ9NZJ4 4579 aa9.33□□□□□ -0.92
PDZRN3-210ENST00000492909 M0R2N4 97 aa9.32□□□□□ -0.92
PDZRN3-210ENST00000492909 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
PDZRN3-210ENST00000492909 C15orf56Q8N910 161 aa9.32□□□□□ -0.92
PDZRN3-210ENST00000492909 ZNF561-AS1K7EIQ3 104 aa9.32□□□□□ -0.92
PDZRN3-210ENST00000492909 XGP55808 180 aa9.32□□□□□ -0.92
PDZRN3-210ENST00000492909 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
PDZRN3-210ENST00000492909 CLEC2BQ92478 149 aa9.32□□□□□ -0.92
PDZRN3-210ENST00000492909 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
PDZRN3-210ENST00000492909 PSCAO43653 123 aa9.31□□□□□ -0.92
PDZRN3-210ENST00000492909 MT-ATP8P03928 68 aa9.31□□□□□ -0.92
PDZRN3-210ENST00000492909 VPS13DQ5THJ4 4388 aa9.3□□□□□ -0.92
PDZRN3-210ENST00000492909 HIGD2BQ4VC39 106 aa9.3□□□□□ -0.92
PDZRN3-210ENST00000492909 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
PDZRN3-210ENST00000492909 GVQW2A0A096LPI5 108 aaPredicted RBP9.29□□□□□ -0.92
PDZRN3-210ENST00000492909 USP17L23D6RBM5 183 aa9.29□□□□□ -0.92
PDZRN3-210ENST00000492909 Q6ZR54 194 aa9.29□□□□□ -0.92
PDZRN3-210ENST00000492909 C6orf223Q8N319 242 aa9.29□□□□□ -0.92
PDZRN3-210ENST00000492909 KMT2AQ03164 3969 aa9.29□□□□□ -0.92
PDZRN3-210ENST00000492909 RYR2Q92736 4967 aa9.29□□□□□ -0.92
PDZRN3-210ENST00000492909 TEX49A0A1B0GTD5 131 aa9.27□□□□□ -0.92
PDZRN3-210ENST00000492909 C2orf48Q96LS8 159 aa9.27□□□□□ -0.92
PDZRN3-210ENST00000492909 RYR3Q15413 4870 aa9.27□□□□□ -0.92
PDZRN3-210ENST00000492909 UNQ6190/PRO20217Q6UXQ8 127 aa9.27□□□□□ -0.93
PDZRN3-210ENST00000492909 CAMK2N2Q96S95 79 aa9.27□□□□□ -0.93
PDZRN3-210ENST00000492909 A0A1B0GV72 72 aa9.26□□□□□ -0.93
PDZRN3-210ENST00000492909 F8WDY8 70 aa9.26□□□□□ -0.93
PDZRN3-210ENST00000492909 LECT2O14960 151 aa9.26□□□□□ -0.93
PDZRN3-210ENST00000492909 C10orf25Q5T742 122 aa9.26□□□□□ -0.93
PDZRN3-210ENST00000492909 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
PDZRN3-210ENST00000492909 PFN2P35080 140 aa9.24□□□□□ -0.93
PDZRN3-210ENST00000492909 LINC00158P58513 81 aa9.24□□□□□ -0.93
PDZRN3-210ENST00000492909 COX17Q14061 63 aa9.24□□□□□ -0.93
PDZRN3-210ENST00000492909 TRAV13-2A0A0B4J235 113 aa9.23□□□□□ -0.93
PDZRN3-210ENST00000492909 SYCNQ0VAF6 134 aa9.23□□□□□ -0.93
PDZRN3-210ENST00000492909 MIR7-3HGQ8N6C7 128 aa9.23□□□□□ -0.93
PDZRN3-210ENST00000492909 C14orf177Q52M58 125 aa9.22□□□□□ -0.93
PDZRN3-210ENST00000492909 C9orf116Q5BN46 136 aaPredicted RBP9.22□□□□□ -0.93
PDZRN3-210ENST00000492909 C1orf134Q5TEV5 83 aa9.22□□□□□ -0.93
PDZRN3-210ENST00000492909 Q6ZRU5 148 aa9.22□□□□□ -0.93
PDZRN3-210ENST00000492909 C6orf48Q9UBA6 75 aa9.22□□□□□ -0.93
PDZRN3-210ENST00000492909 TRACP01848 142 aa9.22□□□□□ -0.93
PDZRN3-210ENST00000492909 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.94
PDZRN3-210ENST00000492909 LRCOL1A6NCL2 159 aa9.2□□□□□ -0.94
PDZRN3-210ENST00000492909 SND1-IT1Q9HBX3 110 aa9.2□□□□□ -0.94
PDZRN3-210ENST00000492909 DNAH6Q9C0G6 4158 aa9.2□□□□□ -0.94
PDZRN3-210ENST00000492909 FAM240AA0A1B0GVK7 77 aa9.19□□□□□ -0.94
PDZRN3-210ENST00000492909 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
PDZRN3-210ENST00000492909 SNCGO76070 127 aa9.19□□□□□ -0.94
PDZRN3-210ENST00000492909 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
PDZRN3-210ENST00000492909 SLPIP03973 132 aa9.19□□□□□ -0.94
PDZRN3-210ENST00000492909 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
PDZRN3-210ENST00000492909 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
PDZRN3-210ENST00000492909 Q6Q795 121 aa9.17□□□□□ -0.94
PDZRN3-210ENST00000492909 FAM218AQ96MZ4 157 aa9.17□□□□□ -0.94
PDZRN3-210ENST00000492909 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.15□□□□□ -0.94
PDZRN3-210ENST00000492909 A0A087WTM6 91 aa9.15□□□□□ -0.94
PDZRN3-210ENST00000492909 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
PDZRN3-210ENST00000492909 BAALC-AS2P0C853 105 aa9.15□□□□□ -0.94
PDZRN3-210ENST00000492909 GAGE2BQ13066 116 aa9.15□□□□□ -0.94
PDZRN3-210ENST00000492909 GAGE2EQ4V326 116 aa9.15□□□□□ -0.94
PDZRN3-210ENST00000492909 GAGE2DQ9UEU5 116 aa9.15□□□□□ -0.94
PDZRN3-210ENST00000492909 DNAH10Q8IVF4 4471 aa9.15□□□□□ -0.94
PDZRN3-210ENST00000492909 Q8N814 137 aa9.14□□□□□ -0.95
PDZRN3-210ENST00000492909 SMIM11BQ8TCY0 68 aa9.14□□□□□ -0.95
PDZRN3-210ENST00000492909 ACYP1P07311 99 aa9.13□□□□□ -0.95
PDZRN3-210ENST00000492909 C22orf24Q9Y442 160 aa9.13□□□□□ -0.95
PDZRN3-210ENST00000492909 H0YGX0 51 aa9.12□□□□□ -0.95
PDZRN3-210ENST00000492909 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
PDZRN3-210ENST00000492909 Q6ZRP5 223 aa9.12□□□□□ -0.95
PDZRN3-210ENST00000492909 RPL18AQ02543 176 aaKnown RBP9.11□□□□□ -0.95
PDZRN3-210ENST00000492909 XAGE1AQ9HD64 81 aa9.11□□□□□ -0.95
PDZRN3-210ENST00000492909 LOC107984640A0A0U1RRK4 108 aa9.1□□□□□ -0.95
PDZRN3-210ENST00000492909 RTL8CO15255 209 aa9.1□□□□□ -0.95
PDZRN3-210ENST00000492909 ANAPC13Q9BS18 74 aa9.1□□□□□ -0.95
PDZRN3-210ENST00000492909 DNAH2Q9P225 4427 aa9.1□□□□□ -0.95
PDZRN3-210ENST00000492909 FRAS1Q86XX4 4008 aa9.1□□□□□ -0.95
PDZRN3-210ENST00000492909 A0A087WYN8 130 aa9.09□□□□□ -0.95
PDZRN3-210ENST00000492909 TNP2Q05952 138 aa9.09□□□□□ -0.95
PDZRN3-210ENST00000492909 NDUFC2O95298 119 aa9.08□□□□□ -0.96
PDZRN3-210ENST00000492909 INAFM2P0DMQ5 153 aa9.08□□□□□ -0.96
PDZRN3-210ENST00000492909 NDUFV3P56181 108 aaKnown RBP9.08□□□□□ -0.96
PDZRN3-210ENST00000492909 C9orf163Q8N9P6 203 aa9.08□□□□□ -0.96
PDZRN3-210ENST00000492909 DNAL4O96015 105 aa9.07□□□□□ -0.96
PDZRN3-210ENST00000492909 OR13C6PQ8NH95 151 aa9.07□□□□□ -0.96
PDZRN3-210ENST00000492909 TRBV7-7A0A0K0K1E9 115 aa9.07□□□□□ -0.96
PDZRN3-210ENST00000492909 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
PDZRN3-210ENST00000492909 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
PDZRN3-210ENST00000492909 SDIM1Q6ZPB5 146 aa9.04□□□□□ -0.96
PDZRN3-210ENST00000492909 Q8NDZ9 215 aa9.04□□□□□ -0.96
PDZRN3-210ENST00000492909 C16orf90A8MZG2 172 aa9.04□□□□□ -0.96
PDZRN3-210ENST00000492909 PRR3P79522 188 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms