RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 PLA2G2DQ9UNK4 145 aa8.79□□□□□ -1
PTPRE-210ENST00000492479 DNAH5Q8TE73 4624 aa8.79□□□□□ -1
PTPRE-210ENST00000492479 A4D1N5 150 aa8.78□□□□□ -1
PTPRE-210ENST00000492479 HINT1P49773 126 aaPredicted RBP8.78□□□□□ -1
PTPRE-210ENST00000492479 SNHG12Q9BXW3 62 aa8.78□□□□□ -1
PTPRE-210ENST00000492479 A0A0B4J2C4 111 aa8.77□□□□□ -1.01
PTPRE-210ENST00000492479 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
PTPRE-210ENST00000492479 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
PTPRE-210ENST00000492479 PKD1P98161 4303 aa8.76□□□□□ -1.01
PTPRE-210ENST00000492479 IGLV5-37A0A075B6J1 123 aa8.76□□□□□ -1.01
PTPRE-210ENST00000492479 RYR3Q15413 4870 aa8.75□□□□□ -1.01
PTPRE-210ENST00000492479 A0A096LNI7 61 aa8.75□□□□□ -1.01
PTPRE-210ENST00000492479 IGLV5-52A0A0A0MRZ9 124 aa8.75□□□□□ -1.01
PTPRE-210ENST00000492479 TRBV10-2A0A0K0K1G8 114 aa8.75□□□□□ -1.01
PTPRE-210ENST00000492479 A6NDN8 102 aa8.75□□□□□ -1.01
PTPRE-210ENST00000492479 EPM2AB3EWF7 344 aa8.75□□□□□ -1.01
PTPRE-210ENST00000492479 NPC2P61916 151 aa8.75□□□□□ -1.01
PTPRE-210ENST00000492479 RPL18AQ02543 176 aaKnown RBP8.75□□□□□ -1.01
PTPRE-210ENST00000492479 XAGE1AQ9HD64 81 aa8.75□□□□□ -1.01
PTPRE-210ENST00000492479 LINC00474Q9P2X8 69 aa8.75□□□□□ -1.01
PTPRE-210ENST00000492479 IGKV2-28A0A075B6P5 120 aa8.74□□□□□ -1.01
PTPRE-210ENST00000492479 IGKV2D-28P01615 120 aa8.74□□□□□ -1.01
PTPRE-210ENST00000492479 CFC1BP0CG36 223 aa8.74□□□□□ -1.01
PTPRE-210ENST00000492479 CFC1P0CG37 223 aa8.74□□□□□ -1.01
PTPRE-210ENST00000492479 VPREB1P12018 145 aa8.74□□□□□ -1.01
PTPRE-210ENST00000492479 GAGE2EQ4V326 116 aa8.74□□□□□ -1.01
PTPRE-210ENST00000492479 Q8NDZ9 215 aa8.74□□□□□ -1.01
PTPRE-210ENST00000492479 GAGE2DQ9UEU5 116 aa8.74□□□□□ -1.01
PTPRE-210ENST00000492479 A0A1B0GVY2 172 aa8.73□□□□□ -1.01
PTPRE-210ENST00000492479 KRTAP10-2P60368 255 aa8.73□□□□□ -1.01
PTPRE-210ENST00000492479 LBHQ53QV2 105 aaPredicted RBP8.73□□□□□ -1.01
PTPRE-210ENST00000492479 DNAH8Q96JB1 4490 aa8.72□□□□□ -1.01
PTPRE-210ENST00000492479 GAGE2BQ13066 116 aa8.72□□□□□ -1.01
PTPRE-210ENST00000492479 NHP2Q9NX24 153 aaKnown RBP8.72□□□□□ -1.01
PTPRE-210ENST00000492479 SPACA4Q8TDM5 124 aa8.71□□□□□ -1.02
PTPRE-210ENST00000492479 TRAV13-2A0A0B4J235 113 aa8.7□□□□□ -1.02
PTPRE-210ENST00000492479 COL5A1-AS1Q5SY13 56 aa8.7□□□□□ -1.02
PTPRE-210ENST00000492479 KRTAP7-1Q8IUC3 87 aa8.7□□□□□ -1.02
PTPRE-210ENST00000492479 LINC00337Q8N6G1 96 aa8.7□□□□□ -1.02
PTPRE-210ENST00000492479 PRO1854Q9UHT4 67 aa8.7□□□□□ -1.02
PTPRE-210ENST00000492479 M0R378 163 aa8.68□□□□□ -1.02
PTPRE-210ENST00000492479 IGLV6-57P01721 117 aa8.68□□□□□ -1.02
PTPRE-210ENST00000492479 BATFQ16520 125 aa8.68□□□□□ -1.02
PTPRE-210ENST00000492479 LINC01620Q4KN68 170 aa8.68□□□□□ -1.02
PTPRE-210ENST00000492479 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
PTPRE-210ENST00000492479 Q6ZSA8 131 aa8.68□□□□□ -1.02
PTPRE-210ENST00000492479 K7ERJ3 54 aa8.67□□□□□ -1.02
PTPRE-210ENST00000492479 RAB37Q96AX2 223 aa8.67□□□□□ -1.02
PTPRE-210ENST00000492479 IGKV2-24A0A0C4DH68 120 aa8.66□□□□□ -1.02
PTPRE-210ENST00000492479 FAM168BA1KXE4 195 aa8.66□□□□□ -1.02
PTPRE-210ENST00000492479 PANO1I0J062 215 aa8.66□□□□□ -1.02
PTPRE-210ENST00000492479 CHTF8P0CG12 524 aa8.66□□□□□ -1.02
PTPRE-210ENST00000492479 TMEM126AQ9H061 195 aa8.66□□□□□ -1.02
PTPRE-210ENST00000492479 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.66□□□□□ -1.02
PTPRE-210ENST00000492479 PKHD1P08F94 4074 aa8.66□□□□□ -1.02
PTPRE-210ENST00000492479 A0A1W2PNN7 141 aa8.65□□□□□ -1.02
PTPRE-210ENST00000492479 TAX1BP3O14907 124 aa8.65□□□□□ -1.02
PTPRE-210ENST00000492479 FUSP35637 526 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTPRE-210ENST00000492479 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
PTPRE-210ENST00000492479 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.02
PTPRE-210ENST00000492479 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
PTPRE-210ENST00000492479 RPL13AP40429 203 aaKnown RBP8.64□□□□□ -1.03
PTPRE-210ENST00000492479 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
PTPRE-210ENST00000492479 C7orf33Q8WU49 177 aa8.64□□□□□ -1.03
PTPRE-210ENST00000492479 C22orf24Q9Y442 160 aa8.64□□□□□ -1.03
PTPRE-210ENST00000492479 NCR3O14931 201 aa8.63□□□□□ -1.03
PTPRE-210ENST00000492479 TSPAN13O95857 204 aa8.63□□□□□ -1.03
PTPRE-210ENST00000492479 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
PTPRE-210ENST00000492479 MRPL55Q7Z7F7 128 aaKnown RBP8.63□□□□□ -1.03
PTPRE-210ENST00000492479 CBY1Q9Y3M2 126 aa8.63□□□□□ -1.03
PTPRE-210ENST00000492479 LRP1BQ9NZR2 4599 aa8.63□□□□□ -1.03
PTPRE-210ENST00000492479 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
PTPRE-210ENST00000492479 FAM19A5Q7Z5A7 132 aaPredicted RBP8.62□□□□□ -1.03
PTPRE-210ENST00000492479 A0A087WYN8 130 aa8.61□□□□□ -1.03
PTPRE-210ENST00000492479 TRBV10-3A0A0K0K1G6 114 aa8.61□□□□□ -1.03
PTPRE-210ENST00000492479 C9orf118A6NHY6 69 aa8.61□□□□□ -1.03
PTPRE-210ENST00000492479 M0QXV9 152 aa8.61□□□□□ -1.03
PTPRE-210ENST00000492479 S100A7L2Q5SY68 101 aa8.61□□□□□ -1.03
PTPRE-210ENST00000492479 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
PTPRE-210ENST00000492479 IGLV1-50A0A075B6I6 118 aa8.6□□□□□ -1.03
PTPRE-210ENST00000492479 LINC00167Q96N53 147 aa8.6□□□□□ -1.03
PTPRE-210ENST00000492479 SMIM11BQ8TCY0 68 aa8.59□□□□□ -1.03
PTPRE-210ENST00000492479 FAM30AQ9NZY2 134 aa8.59□□□□□ -1.03
PTPRE-210ENST00000492479 PRYO14603 147 aa8.58□□□□□ -1.04
PTPRE-210ENST00000492479 SPRR1AP35321 89 aa8.58□□□□□ -1.04
PTPRE-210ENST00000492479 OR13C6PQ8NH95 151 aa8.58□□□□□ -1.04
PTPRE-210ENST00000492479 TRAV23DV6A0A075B6W5 121 aa8.57□□□□□ -1.04
PTPRE-210ENST00000492479 TRBV7-6A0A0J9YX20 115 aa8.57□□□□□ -1.04
PTPRE-210ENST00000492479 TRIAP1O43715 76 aa8.56□□□□□ -1.04
PTPRE-210ENST00000492479 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
PTPRE-210ENST00000492479 KRTAP4-16G5E9R7 235 aaPredicted RBP8.55□□□□□ -1.04
PTPRE-210ENST00000492479 H3BUT2 72 aa8.55□□□□□ -1.04
PTPRE-210ENST00000492479 ZNF73O43830 326 aaPredicted RBP8.55□□□□□ -1.04
PTPRE-210ENST00000492479 Q1RN00 199 aa8.55□□□□□ -1.04
PTPRE-210ENST00000492479 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
PTPRE-210ENST00000492479 GAGE10A6NGK3 116 aa8.54□□□□□ -1.04
PTPRE-210ENST00000492479 H7C2G1 150 aa8.54□□□□□ -1.04
PTPRE-210ENST00000492479 LYRM7Q5U5X0 104 aa8.54□□□□□ -1.04
PTPRE-210ENST00000492479 SCXQ7RTU7 201 aa8.54□□□□□ -1.04
PTPRE-210ENST00000492479 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms