RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 C22orf24Q9Y442 160 aa9.04□□□□□ -0.96
SS18L1-205ENST00000492466 MYMXA0A1B0GTQ4 84 aa9.03□□□□□ -0.96
SS18L1-205ENST00000492466 LGALS3P17931 250 aaKnown RBP9.03□□□□□ -0.96
SS18L1-205ENST00000492466 HERV-K104P63124 156 aa9.03□□□□□ -0.96
SS18L1-205ENST00000492466 REG3GQ6UW15 175 aa9.03□□□□□ -0.96
SS18L1-205ENST00000492466 SPINK6Q6UWN8 80 aa9.03□□□□□ -0.96
SS18L1-205ENST00000492466 SND1-IT1Q9HBX3 110 aa9.03□□□□□ -0.96
SS18L1-205ENST00000492466 GAGE10A6NGK3 116 aa9.02□□□□□ -0.97
SS18L1-205ENST00000492466 SYS1-DBNDD2H3BUS1 97 aa9.02□□□□□ -0.97
SS18L1-205ENST00000492466 LEPROTO15243 131 aa9.02□□□□□ -0.97
SS18L1-205ENST00000492466 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
SS18L1-205ENST00000492466 TP73-AS1Q9UF72 201 aa9.02□□□□□ -0.97
SS18L1-205ENST00000492466 KRTAP10-8P60410 259 aa9.01□□□□□ -0.97
SS18L1-205ENST00000492466 KRTDAPP60985 99 aa9.01□□□□□ -0.97
SS18L1-205ENST00000492466 SRSF9Q13242 221 aaKnown RBP eCLIP9.01□□□□□ -0.97
SS18L1-205ENST00000492466 LINC00587B1AMM8 73 aa9□□□□□ -0.97
SS18L1-205ENST00000492466 J3QQQ9 107 aa9□□□□□ -0.97
SS18L1-205ENST00000492466 IGLV7-43P04211 117 aa9□□□□□ -0.97
SS18L1-205ENST00000492466 SMIM13P0DJ93 91 aa9□□□□□ -0.97
SS18L1-205ENST00000492466 RPL24P83731 157 aaKnown RBP9□□□□□ -0.97
SS18L1-205ENST00000492466 C20orf202A1L168 122 aa8.99□□□□□ -0.97
SS18L1-205ENST00000492466 RPL37AP8A6NKH3 93 aa8.99□□□□□ -0.97
SS18L1-205ENST00000492466 PET117Q6UWS5 81 aa8.99□□□□□ -0.97
SS18L1-205ENST00000492466 KRTAP11-1Q8IUC1 163 aa8.99□□□□□ -0.97
SS18L1-205ENST00000492466 TSPEAR-AS2P59090 65 aa8.98□□□□□ -0.97
SS18L1-205ENST00000492466 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
SS18L1-205ENST00000492466 DIRC1Q969H9 104 aa8.98□□□□□ -0.97
SS18L1-205ENST00000492466 LPAP08519 4548 aa8.97□□□□□ -0.97
SS18L1-205ENST00000492466 IGLV5-37A0A075B6J1 123 aa8.97□□□□□ -0.97
SS18L1-205ENST00000492466 C3orf79P0CE67 100 aa8.97□□□□□ -0.97
SS18L1-205ENST00000492466 S100A2P29034 98 aa8.97□□□□□ -0.97
SS18L1-205ENST00000492466 NMUP48645 174 aa8.97□□□□□ -0.97
SS18L1-205ENST00000492466 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
SS18L1-205ENST00000492466 LINC00167Q96N53 147 aa8.97□□□□□ -0.97
SS18L1-205ENST00000492466 IGKV2-28A0A075B6P5 120 aa8.96□□□□□ -0.98
SS18L1-205ENST00000492466 IGKV2D-28P01615 120 aa8.96□□□□□ -0.98
SS18L1-205ENST00000492466 S100A6P06703 90 aa8.96□□□□□ -0.98
SS18L1-205ENST00000492466 LINC01545Q5VT33 79 aa8.96□□□□□ -0.98
SS18L1-205ENST00000492466 VPREB1P12018 145 aa8.95□□□□□ -0.98
SS18L1-205ENST00000492466 BOD1L2Q8IYS8 172 aa8.95□□□□□ -0.98
SS18L1-205ENST00000492466 MIEN1Q9BRT3 115 aa8.95□□□□□ -0.98
SS18L1-205ENST00000492466 E9PLD3 99 aa8.94□□□□□ -0.98
SS18L1-205ENST00000492466 UBE2AP49459 152 aa8.93□□□□□ -0.98
SS18L1-205ENST00000492466 H0Y9J4 135 aa8.92□□□□□ -0.98
SS18L1-205ENST00000492466 NCR3O14931 201 aa8.92□□□□□ -0.98
SS18L1-205ENST00000492466 BCE1O60756 84 aa8.92□□□□□ -0.98
SS18L1-205ENST00000492466 RPL28P46779 137 aaKnown RBP8.92□□□□□ -0.98
SS18L1-205ENST00000492466 DAND5Q8N907 189 aa8.92□□□□□ -0.98
SS18L1-205ENST00000492466 AKR1D1P51857 326 aa8.9□□□□□ -0.98
SS18L1-205ENST00000492466 ZNF815PA8K554 130 aa8.89□□□□□ -0.99
SS18L1-205ENST00000492466 M0R378 163 aa8.89□□□□□ -0.99
SS18L1-205ENST00000492466 ZNF861PO60384 105 aa8.89□□□□□ -0.99
SS18L1-205ENST00000492466 NPC2P61916 151 aa8.89□□□□□ -0.99
SS18L1-205ENST00000492466 S100A12P80511 92 aa8.89□□□□□ -0.99
SS18L1-205ENST00000492466 ATOH7Q8N100 152 aa8.89□□□□□ -0.99
SS18L1-205ENST00000492466 FAM19A1Q7Z5A9 133 aa8.88□□□□□ -0.99
SS18L1-205ENST00000492466 HIST3H2BBQ8N257 126 aa8.88□□□□□ -0.99
SS18L1-205ENST00000492466 Q8NDZ9 215 aa8.88□□□□□ -0.99
SS18L1-205ENST00000492466 IGLV1-50A0A075B6I6 118 aa8.87□□□□□ -0.99
SS18L1-205ENST00000492466 A0A0J9YXY3 114 aa8.87□□□□□ -0.99
SS18L1-205ENST00000492466 TMEM238C9JI98 176 aa8.87□□□□□ -0.99
SS18L1-205ENST00000492466 TMEM126AQ9H061 195 aa8.87□□□□□ -0.99
SS18L1-205ENST00000492466 PRLHP81277 87 aa8.85□□□□□ -0.99
SS18L1-205ENST00000492466 SCGB1D4Q6XE38 83 aa8.85□□□□□ -0.99
SS18L1-205ENST00000492466 HIST1H2BLQ99880 126 aa8.85□□□□□ -0.99
SS18L1-205ENST00000492466 IGKV2D-26A0A0A0MRZ7 120 aa8.84□□□□□ -0.99
SS18L1-205ENST00000492466 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
SS18L1-205ENST00000492466 HSBP1L1C9JCN9 74 aa8.83□□□□□ -1
SS18L1-205ENST00000492466 PRYO14603 147 aa8.83□□□□□ -1
SS18L1-205ENST00000492466 S100A7L2Q5SY68 101 aa8.83□□□□□ -1
SS18L1-205ENST00000492466 TTTY13Q9BZ97 58 aa8.83□□□□□ -1
SS18L1-205ENST00000492466 SNRPEP62304 92 aaKnown RBP8.82□□□□□ -1
SS18L1-205ENST00000492466 PRR26Q8N8Z3 221 aa8.82□□□□□ -1
SS18L1-205ENST00000492466 TRBV10-3A0A0K0K1G6 114 aa8.81□□□□□ -1
SS18L1-205ENST00000492466 ETDCA0A1B0GVM5 59 aa8.81□□□□□ -1
SS18L1-205ENST00000492466 TIMM17BO60830 172 aa8.81□□□□□ -1
SS18L1-205ENST00000492466 DDTP30046 118 aa8.81□□□□□ -1
SS18L1-205ENST00000492466 ANKRD39Q53RE8 183 aa8.81□□□□□ -1
SS18L1-205ENST00000492466 HIGD2AQ9BW72 106 aa8.81□□□□□ -1
SS18L1-205ENST00000492466 RPL13AP40429 203 aaKnown RBP8.8□□□□□ -1
SS18L1-205ENST00000492466 ADAMTSL4-AS1Q5T5F5 129 aa8.8□□□□□ -1
SS18L1-205ENST00000492466 MUC2Q02817 5179 aa8.79□□□□□ -1
SS18L1-205ENST00000492466 TRBV10-2A0A0K0K1G8 114 aa8.79□□□□□ -1
SS18L1-205ENST00000492466 NDUFC2O95298 119 aa8.79□□□□□ -1
SS18L1-205ENST00000492466 LOC107984156A0A0G2JMH3 177 aa8.78□□□□□ -1
SS18L1-205ENST00000492466 SCGB1D1O95968 90 aa8.78□□□□□ -1
SS18L1-205ENST00000492466 ARL17AQ8IVW1 177 aa8.78□□□□□ -1
SS18L1-205ENST00000492466 LINC00308Q8TCZ7 52 aa8.78□□□□□ -1
SS18L1-205ENST00000492466 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1.01
SS18L1-205ENST00000492466 SOSTDC1Q6X4U4 206 aa8.77□□□□□ -1.01
SS18L1-205ENST00000492466 KRTAP13-1Q8IUC0 172 aa8.77□□□□□ -1.01
SS18L1-205ENST00000492466 OR13C6PQ8NH95 151 aa8.77□□□□□ -1.01
SS18L1-205ENST00000492466 COPS9Q8WXC6 57 aa8.77□□□□□ -1.01
SS18L1-205ENST00000492466 LITAFQ99732 161 aa8.76□□□□□ -1.01
SS18L1-205ENST00000492466 KCNQ1DNQ9H478 68 aa8.76□□□□□ -1.01
SS18L1-205ENST00000492466 SPANXCQ9NY87 97 aa8.76□□□□□ -1.01
SS18L1-205ENST00000492466 CBY1Q9Y3M2 126 aa8.76□□□□□ -1.01
SS18L1-205ENST00000492466 PCP2Q8IVA1 136 aa8.75□□□□□ -1.01
SS18L1-205ENST00000492466 TRAV23DV6A0A075B6W5 121 aa8.74□□□□□ -1.01
SS18L1-205ENST00000492466 C5orf52A6NGY3 159 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms