RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 A4D1N5 150 aa6.25□□□□□ -1.41
USP54-214ENST00000492357 C16orf90A8MZG2 172 aa6.25□□□□□ -1.41
USP54-214ENST00000492357 LECT2O14960 151 aa6.25□□□□□ -1.41
USP54-214ENST00000492357 HINT1P49773 126 aaPredicted RBP6.25□□□□□ -1.41
USP54-214ENST00000492357 LYSTQ99698 3801 aa6.24□□□□□ -1.41
USP54-214ENST00000492357 TRAV13-2A0A0B4J235 113 aa6.24□□□□□ -1.41
USP54-214ENST00000492357 FXYD2P54710 66 aa6.24□□□□□ -1.41
USP54-214ENST00000492357 C9orf116Q5BN46 136 aaPredicted RBP6.24□□□□□ -1.41
USP54-214ENST00000492357 IGLV5-37A0A075B6J1 123 aa6.23□□□□□ -1.41
USP54-214ENST00000492357 A0A0U1RRA0 63 aa6.23□□□□□ -1.41
USP54-214ENST00000492357 SOSTDC1Q6X4U4 206 aa6.23□□□□□ -1.41
USP54-214ENST00000492357 Q6ZRP5 223 aa6.23□□□□□ -1.41
USP54-214ENST00000492357 DAND5Q8N907 189 aa6.23□□□□□ -1.41
USP54-214ENST00000492357 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.22□□□□□ -1.41
USP54-214ENST00000492357 RPL18AQ02543 176 aaKnown RBP6.22□□□□□ -1.41
USP54-214ENST00000492357 SDIM1Q6ZPB5 146 aa6.22□□□□□ -1.41
USP54-214ENST00000492357 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
USP54-214ENST00000492357 PRO1854Q9UHT4 67 aa6.22□□□□□ -1.41
USP54-214ENST00000492357 IGLV5-52A0A0A0MRZ9 124 aa6.21□□□□□ -1.42
USP54-214ENST00000492357 CFC1BP0CG36 223 aa6.21□□□□□ -1.42
USP54-214ENST00000492357 CFC1P0CG37 223 aa6.21□□□□□ -1.42
USP54-214ENST00000492357 BATFQ16520 125 aa6.21□□□□□ -1.42
USP54-214ENST00000492357 TMEM126AQ9H061 195 aa6.21□□□□□ -1.42
USP54-214ENST00000492357 NHP2Q9NX24 153 aaKnown RBP6.21□□□□□ -1.42
USP54-214ENST00000492357 EPM2AB3EWF7 344 aa6.2□□□□□ -1.42
USP54-214ENST00000492357 M0R378 163 aa6.19□□□□□ -1.42
USP54-214ENST00000492357 VPREB1P12018 145 aa6.19□□□□□ -1.42
USP54-214ENST00000492357 GAGE2EQ4V326 116 aa6.19□□□□□ -1.42
USP54-214ENST00000492357 C9orf129Q5T035 196 aaKnown RBP6.19□□□□□ -1.42
USP54-214ENST00000492357 LYRM7Q5U5X0 104 aa6.19□□□□□ -1.42
USP54-214ENST00000492357 XAGE1AQ9HD64 81 aa6.19□□□□□ -1.42
USP54-214ENST00000492357 GAGE2DQ9UEU5 116 aa6.19□□□□□ -1.42
USP54-214ENST00000492357 IGKV2-28A0A075B6P5 120 aa6.18□□□□□ -1.42
USP54-214ENST00000492357 A0A096LNI7 61 aa6.18□□□□□ -1.42
USP54-214ENST00000492357 A0A1B0GV90 55 aa6.18□□□□□ -1.42
USP54-214ENST00000492357 TAX1BP3O14907 124 aa6.18□□□□□ -1.42
USP54-214ENST00000492357 IGKV2D-28P01615 120 aa6.18□□□□□ -1.42
USP54-214ENST00000492357 NPC2P61916 151 aa6.18□□□□□ -1.42
USP54-214ENST00000492357 GAGE2BQ13066 116 aa6.18□□□□□ -1.42
USP54-214ENST00000492357 NKAPP1Q8N9T2 125 aa6.18□□□□□ -1.42
USP54-214ENST00000492357 IGLV6-57P01721 117 aa6.17□□□□□ -1.42
USP54-214ENST00000492357 LINC00337Q8N6G1 96 aa6.17□□□□□ -1.42
USP54-214ENST00000492357 KMT2AQ03164 3969 aa6.16□□□□□ -1.42
USP54-214ENST00000492357 RPL28P46779 137 aaKnown RBP6.16□□□□□ -1.42
USP54-214ENST00000492357 S100A7L2Q5SY68 101 aa6.16□□□□□ -1.42
USP54-214ENST00000492357 SPACA4Q8TDM5 124 aa6.16□□□□□ -1.42
USP54-214ENST00000492357 TRBV7-6A0A0J9YX20 115 aa6.15□□□□□ -1.42
USP54-214ENST00000492357 C9orf118A6NHY6 69 aa6.15□□□□□ -1.42
USP54-214ENST00000492357 COX6CP09669 75 aa6.15□□□□□ -1.42
USP54-214ENST00000492357 RPL13AP40429 203 aaKnown RBP6.15□□□□□ -1.42
USP54-214ENST00000492357 Q6ZSA8 131 aa6.14□□□□□ -1.43
USP54-214ENST00000492357 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
USP54-214ENST00000492357 PLAC8Q9NZF1 115 aa6.14□□□□□ -1.43
USP54-214ENST00000492357 IGKV2-24A0A0C4DH68 120 aa6.13□□□□□ -1.43
USP54-214ENST00000492357 A0A1B0GVY2 172 aa6.13□□□□□ -1.43
USP54-214ENST00000492357 H0YGX0 51 aa6.13□□□□□ -1.43
USP54-214ENST00000492357 PRYO14603 147 aa6.13□□□□□ -1.43
USP54-214ENST00000492357 TSPAN13O95857 204 aa6.13□□□□□ -1.43
USP54-214ENST00000492357 OR13C6PQ8NH95 151 aa6.13□□□□□ -1.43
USP54-214ENST00000492357 KCNQ1DNQ9H478 68 aa6.13□□□□□ -1.43
USP54-214ENST00000492357 C22orf24Q9Y442 160 aa6.13□□□□□ -1.43
USP54-214ENST00000492357 TRBV20-1A0A075B6N2 111 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 A0A1B0GX51 115 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 K7ERJ3 54 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 M0QXV9 152 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 KRTAP10-2P60368 255 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 VAMP3Q15836 100 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 Q1RN00 199 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 SERTAD4-AS1Q5TG53 156 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 Q8NDZ9 215 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 DNAH17Q9UFH2 4485 aa6.12□□□□□ -1.43
USP54-214ENST00000492357 DNAH2Q9P225 4427 aa6.11□□□□□ -1.43
USP54-214ENST00000492357 IGLV1-50A0A075B6I6 118 aa6.11□□□□□ -1.43
USP54-214ENST00000492357 TRAV23DV6A0A075B6W5 121 aa6.11□□□□□ -1.43
USP54-214ENST00000492357 TRBV10-3A0A0K0K1G6 114 aa6.11□□□□□ -1.43
USP54-214ENST00000492357 NCR3O14931 201 aa6.11□□□□□ -1.43
USP54-214ENST00000492357 SNCGO76070 127 aa6.11□□□□□ -1.43
USP54-214ENST00000492357 FABP2P12104 132 aa6.11□□□□□ -1.43
USP54-214ENST00000492357 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
USP54-214ENST00000492357 SACSQ9NZJ4 4579 aa6.11□□□□□ -1.43
USP54-214ENST00000492357 DNAH10Q8IVF4 4471 aa6.1□□□□□ -1.43
USP54-214ENST00000492357 A0A1W2PPM0 123 aa6.1□□□□□ -1.43
USP54-214ENST00000492357 SPRR1AP35321 89 aa6.1□□□□□ -1.43
USP54-214ENST00000492357 PSMB2P49721 201 aa6.1□□□□□ -1.43
USP54-214ENST00000492357 FAM19A5Q7Z5A7 132 aaPredicted RBP6.1□□□□□ -1.43
USP54-214ENST00000492357 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
USP54-214ENST00000492357 RYR2Q92736 4967 aa6.09□□□□□ -1.43
USP54-214ENST00000492357 A0A087WYN8 130 aa6.09□□□□□ -1.43
USP54-214ENST00000492357 A0A1W2PNN7 141 aa6.09□□□□□ -1.43
USP54-214ENST00000492357 H3BUT2 72 aa6.09□□□□□ -1.43
USP54-214ENST00000492357 ZNF73O43830 326 aaPredicted RBP6.09□□□□□ -1.43
USP54-214ENST00000492357 PRR3P79522 188 aaKnown RBP6.09□□□□□ -1.43
USP54-214ENST00000492357 SMIM11BQ8TCY0 68 aa6.09□□□□□ -1.43
USP54-214ENST00000492357 DIRC1Q969H9 104 aa6.09□□□□□ -1.43
USP54-214ENST00000492357 LINC00167Q96N53 147 aa6.09□□□□□ -1.43
USP54-214ENST00000492357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
USP54-214ENST00000492357 HYDINQ4G0P3 5121 aa6.09□□□□□ -1.44
USP54-214ENST00000492357 FRAS1Q86XX4 4008 aa6.09□□□□□ -1.44
USP54-214ENST00000492357 FAM168BA1KXE4 195 aa6.08□□□□□ -1.44
USP54-214ENST00000492357 TRIAP1O43715 76 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms