RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 Q8NBF4 154 aa6.52□□□□□ -1.37
CACNA1C-228ENST00000492150 CST9LQ9H4G1 147 aa6.52□□□□□ -1.37
CACNA1C-228ENST00000492150 hCG_2014768A0A024R1R8 64 aa6.5□□□□□ -1.37
CACNA1C-228ENST00000492150 M0R2T5 61 aa6.5□□□□□ -1.37
CACNA1C-228ENST00000492150 RAB14P61106 215 aa6.5□□□□□ -1.37
CACNA1C-228ENST00000492150 RPL24P83731 157 aaKnown RBP6.5□□□□□ -1.37
CACNA1C-228ENST00000492150 MRPL18Q9H0U6 180 aaKnown RBP6.5□□□□□ -1.37
CACNA1C-228ENST00000492150 IGLV5-39A0A0G2JS06 123 aa6.49□□□□□ -1.37
CACNA1C-228ENST00000492150 ERG28Q9UKR5 140 aa6.49□□□□□ -1.37
CACNA1C-228ENST00000492150 SPINK1P00995 79 aa6.48□□□□□ -1.37
CACNA1C-228ENST00000492150 PMVKQ15126 192 aa6.48□□□□□ -1.37
CACNA1C-228ENST00000492150 KIAA1644Q3SXP7 199 aa6.48□□□□□ -1.37
CACNA1C-228ENST00000492150 FLGP20930 4061 aaPredicted RBP6.47□□□□□ -1.37
CACNA1C-228ENST00000492150 H3BRM9 83 aa6.47□□□□□ -1.37
CACNA1C-228ENST00000492150 COX17Q14061 63 aa6.47□□□□□ -1.37
CACNA1C-228ENST00000492150 XP32Q5T750 250 aa6.47□□□□□ -1.37
CACNA1C-228ENST00000492150 ANAPC16Q96DE5 110 aa6.47□□□□□ -1.37
CACNA1C-228ENST00000492150 ZNF706Q9Y5V0 76 aaPredicted RBP6.47□□□□□ -1.37
CACNA1C-228ENST00000492150 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
CACNA1C-228ENST00000492150 MT-ND4LP03901 98 aa6.46□□□□□ -1.38
CACNA1C-228ENST00000492150 ZNF625Q96I27 306 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-228ENST00000492150 LINC01549A6NIU2 74 aa6.45□□□□□ -1.38
CACNA1C-228ENST00000492150 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
CACNA1C-228ENST00000492150 IGLC3P0DOY3 106 aa6.45□□□□□ -1.38
CACNA1C-228ENST00000492150 Q8N377 158 aa6.45□□□□□ -1.38
CACNA1C-228ENST00000492150 NEBP20929 6669 aa6.45□□□□□ -1.38
CACNA1C-228ENST00000492150 ZNF22P17026 224 aaPredicted RBP6.44□□□□□ -1.38
CACNA1C-228ENST00000492150 KRTAP20-1Q3LI63 56 aa6.44□□□□□ -1.38
CACNA1C-228ENST00000492150 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
CACNA1C-228ENST00000492150 A0A1B0GVG6 124 aa6.43□□□□□ -1.38
CACNA1C-228ENST00000492150 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
CACNA1C-228ENST00000492150 LINC00483Q53H64 154 aa6.43□□□□□ -1.38
CACNA1C-228ENST00000492150 NDUFA12Q9UI09 145 aa6.43□□□□□ -1.38
CACNA1C-228ENST00000492150 CFC1P0CG37 223 aa6.42□□□□□ -1.38
CACNA1C-228ENST00000492150 SPRR1AP35321 89 aa6.42□□□□□ -1.38
CACNA1C-228ENST00000492150 PRYO14603 147 aa6.41□□□□□ -1.38
CACNA1C-228ENST00000492150 FAM19A2Q8N3H0 131 aa6.41□□□□□ -1.38
CACNA1C-228ENST00000492150 SLC25A20O43772 301 aa6.4□□□□□ -1.38
CACNA1C-228ENST00000492150 MOBPQ13875 183 aa6.4□□□□□ -1.38
CACNA1C-228ENST00000492150 GAGE2AQ6NT46 116 aa6.4□□□□□ -1.38
CACNA1C-228ENST00000492150 KCNQ1DNQ9H478 68 aa6.4□□□□□ -1.38
CACNA1C-228ENST00000492150 IGLV9-49A0A0B4J1Y8 123 aa6.39□□□□□ -1.39
CACNA1C-228ENST00000492150 NDUFA6P56556 154 aa6.39□□□□□ -1.39
CACNA1C-228ENST00000492150 LINC00158P58513 81 aa6.39□□□□□ -1.39
CACNA1C-228ENST00000492150 SSBP3-AS1Q7Z2R9 100 aa6.39□□□□□ -1.39
CACNA1C-228ENST00000492150 A0A096LNJ9 63 aa6.38□□□□□ -1.39
CACNA1C-228ENST00000492150 A0A0U1RRA0 63 aa6.38□□□□□ -1.39
CACNA1C-228ENST00000492150 ETDCA0A1B0GVM5 59 aa6.38□□□□□ -1.39
CACNA1C-228ENST00000492150 ERC2-IT1O76042 136 aa6.38□□□□□ -1.39
CACNA1C-228ENST00000492150 SFTA2Q6UW10 78 aa6.38□□□□□ -1.39
CACNA1C-228ENST00000492150 FA2HQ7L5A8 372 aa6.38□□□□□ -1.39
CACNA1C-228ENST00000492150 C11orf86A6NJI1 115 aa6.37□□□□□ -1.39
CACNA1C-228ENST00000492150 TRAV9-1A0A075B6T8 112 aa6.36□□□□□ -1.39
CACNA1C-228ENST00000492150 NCR3O14931 201 aa6.36□□□□□ -1.39
CACNA1C-228ENST00000492150 PCOTHQ58A44 107 aa6.36□□□□□ -1.39
CACNA1C-228ENST00000492150 BOD1L2Q8IYS8 172 aa6.36□□□□□ -1.39
CACNA1C-228ENST00000492150 SMCO4Q9NRQ5 59 aa6.36□□□□□ -1.39
CACNA1C-228ENST00000492150 TRBV10-3A0A0K0K1G6 114 aa6.35□□□□□ -1.39
CACNA1C-228ENST00000492150 B5MCH6 92 aa6.35□□□□□ -1.39
CACNA1C-228ENST00000492150 SMIM13P0DJ93 91 aa6.35□□□□□ -1.39
CACNA1C-228ENST00000492150 TMEM170BQ5T4T1 132 aa6.35□□□□□ -1.39
CACNA1C-228ENST00000492150 IGLV8-61A0A075B6I0 122 aa6.34□□□□□ -1.39
CACNA1C-228ENST00000492150 URB1-AS1Q96HZ7 61 aa6.34□□□□□ -1.39
CACNA1C-228ENST00000492150 Q9BRP9 147 aa6.34□□□□□ -1.39
CACNA1C-228ENST00000492150 LINC00846Q9NV44 126 aa6.34□□□□□ -1.39
CACNA1C-228ENST00000492150 BAGE3Q86Y29 109 aa6.33□□□□□ -1.4
CACNA1C-228ENST00000492150 MIR7-3HGQ8N6C7 128 aa6.33□□□□□ -1.4
CACNA1C-228ENST00000492150 FABP9Q0Z7S8 132 aa6.32□□□□□ -1.4
CACNA1C-228ENST00000492150 TMEM223A0PJW6 202 aa6.31□□□□□ -1.4
CACNA1C-228ENST00000492150 ATP6V1G1O75348 118 aa6.31□□□□□ -1.4
CACNA1C-228ENST00000492150 HBDP02042 147 aa6.31□□□□□ -1.4
CACNA1C-228ENST00000492150 PMCHL1Q16048 86 aa6.31□□□□□ -1.4
CACNA1C-228ENST00000492150 C9orf92A6NGG3 77 aa6.29□□□□□ -1.4
CACNA1C-228ENST00000492150 LINC00614P0C842 121 aa6.29□□□□□ -1.4
CACNA1C-228ENST00000492150 MEIG1Q5JSS6 88 aa6.29□□□□□ -1.4
CACNA1C-228ENST00000492150 Q6ZRX8 168 aa6.29□□□□□ -1.4
CACNA1C-228ENST00000492150 CHTOPQ9Y3Y2 248 aaKnown RBP6.29□□□□□ -1.4
CACNA1C-228ENST00000492150 COX19Q49B96 90 aa6.28□□□□□ -1.4
CACNA1C-228ENST00000492150 C9orf153Q5TBE3 101 aa6.28□□□□□ -1.4
CACNA1C-228ENST00000492150 C18orf32Q8TCD1 76 aa6.28□□□□□ -1.4
CACNA1C-228ENST00000492150 S100PP25815 95 aa6.27□□□□□ -1.41
CACNA1C-228ENST00000492150 DDTP30046 118 aa6.27□□□□□ -1.41
CACNA1C-228ENST00000492150 S100A12P80511 92 aa6.27□□□□□ -1.41
CACNA1C-228ENST00000492150 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
CACNA1C-228ENST00000492150 LOC107984156A0A0G2JMH3 177 aa6.26□□□□□ -1.41
CACNA1C-228ENST00000492150 LCE2BO14633 110 aa6.26□□□□□ -1.41
CACNA1C-228ENST00000492150 HERV-K104P63124 156 aa6.26□□□□□ -1.41
CACNA1C-228ENST00000492150 ARL17AQ8IVW1 177 aa6.26□□□□□ -1.41
CACNA1C-228ENST00000492150 SEC11CQ9BY50 192 aa6.26□□□□□ -1.41
CACNA1C-228ENST00000492150 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
CACNA1C-228ENST00000492150 TRBV10-2A0A0K0K1G8 114 aa6.25□□□□□ -1.41
CACNA1C-228ENST00000492150 COX6B2Q6YFQ2 88 aa6.25□□□□□ -1.41
CACNA1C-228ENST00000492150 ST20-AS1Q8NBB2 130 aa6.25□□□□□ -1.41
CACNA1C-228ENST00000492150 TMEM218A2RU14 115 aa6.24□□□□□ -1.41
CACNA1C-228ENST00000492150 LINC00587B1AMM8 73 aa6.24□□□□□ -1.41
CACNA1C-228ENST00000492150 KRTAP19-6Q3LI70 58 aa6.24□□□□□ -1.41
CACNA1C-228ENST00000492150 TRAV12-1A0A0B4J245 112 aa6.23□□□□□ -1.41
CACNA1C-228ENST00000492150 IGLV6-57P01721 117 aa6.23□□□□□ -1.41
CACNA1C-228ENST00000492150 MAP1LC3CQ9BXW4 147 aa6.23□□□□□ -1.41
CACNA1C-228ENST00000492150 MYMXA0A1B0GTQ4 84 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms