RNA–Protein interactions for RNA: ENST00000491815.1

PRDM2-210, Transcript of PR/SET domain 2, humanhuman

TSL 2

Gene PRDM2, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-210ENST00000491815 TNXBP22105 4242 aa7.1□□□□□ -1.27
PRDM2-210ENST00000491815 HSBP1O75506 76 aa7.09□□□□□ -1.27
PRDM2-210ENST00000491815 C1orf137Q5JT78 98 aa7.09□□□□□ -1.27
PRDM2-210ENST00000491815 REG3GQ6UW15 175 aa7.09□□□□□ -1.27
PRDM2-210ENST00000491815 IFI27L1Q96BM0 104 aa7.09□□□□□ -1.27
PRDM2-210ENST00000491815 TP73-AS1Q9UF72 201 aa7.09□□□□□ -1.27
PRDM2-210ENST00000491815 COLCA2A8K830 154 aa7.08□□□□□ -1.28
PRDM2-210ENST00000491815 IGLV7-43P04211 117 aa7.08□□□□□ -1.28
PRDM2-210ENST00000491815 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
PRDM2-210ENST00000491815 XAGE1AQ9HD64 81 aa7.08□□□□□ -1.28
PRDM2-210ENST00000491815 CHTOPQ9Y3Y2 248 aaKnown RBP7.08□□□□□ -1.28
PRDM2-210ENST00000491815 C22orf24Q9Y442 160 aa7.07□□□□□ -1.28
PRDM2-210ENST00000491815 IGLV5-37A0A075B6J1 123 aa7.06□□□□□ -1.28
PRDM2-210ENST00000491815 UBE2BP63146 152 aa7.06□□□□□ -1.28
PRDM2-210ENST00000491815 TMEM170BQ5T4T1 132 aa7.06□□□□□ -1.28
PRDM2-210ENST00000491815 TMEM223A0PJW6 202 aa7.05□□□□□ -1.28
PRDM2-210ENST00000491815 SERF1AO75920 110 aa7.05□□□□□ -1.28
PRDM2-210ENST00000491815 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
PRDM2-210ENST00000491815 COX17Q14061 63 aa7.05□□□□□ -1.28
PRDM2-210ENST00000491815 LBHQ53QV2 105 aaPredicted RBP7.05□□□□□ -1.28
PRDM2-210ENST00000491815 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
PRDM2-210ENST00000491815 ZNF625Q96I27 306 aaPredicted RBP7.05□□□□□ -1.28
PRDM2-210ENST00000491815 NUPR1O60356 82 aa7.04□□□□□ -1.28
PRDM2-210ENST00000491815 LEPROTL1O95214 131 aa7.04□□□□□ -1.28
PRDM2-210ENST00000491815 MRPL55Q7Z7F7 128 aaKnown RBP7.04□□□□□ -1.28
PRDM2-210ENST00000491815 DIRC1Q969H9 104 aa7.04□□□□□ -1.28
PRDM2-210ENST00000491815 ERG28Q9UKR5 140 aa7.04□□□□□ -1.28
PRDM2-210ENST00000491815 HMCN2Q8NDA2 5059 aa7.03□□□□□ -1.28
PRDM2-210ENST00000491815 H0Y9J4 135 aa7.03□□□□□ -1.28
PRDM2-210ENST00000491815 MPLKIPQ8TAP9 179 aa7.02□□□□□ -1.29
PRDM2-210ENST00000491815 SND1-IT1Q9HBX3 110 aa7.01□□□□□ -1.29
PRDM2-210ENST00000491815 ZNF861PO60384 105 aa7□□□□□ -1.29
PRDM2-210ENST00000491815 PFN2P35080 140 aa7□□□□□ -1.29
PRDM2-210ENST00000491815 LINC00167Q96N53 147 aa7□□□□□ -1.29
PRDM2-210ENST00000491815 HSPB8Q9UJY1 196 aa7□□□□□ -1.29
PRDM2-210ENST00000491815 KRTAP1-4P0C5Y4 121 aa6.99□□□□□ -1.29
PRDM2-210ENST00000491815 VPREB1P12018 145 aa6.99□□□□□ -1.29
PRDM2-210ENST00000491815 NKAPP1Q8N9T2 125 aa6.99□□□□□ -1.29
PRDM2-210ENST00000491815 BCE1O60756 84 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 SCO1O75880 301 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 PLNP26678 52 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HERV-K104P63124 156 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
PRDM2-210ENST00000491815 RPL24P83731 157 aaKnown RBP6.97□□□□□ -1.29
PRDM2-210ENST00000491815 IGLV1-50A0A075B6I6 118 aa6.96□□□□□ -1.3
PRDM2-210ENST00000491815 FABP4P15090 132 aa6.96□□□□□ -1.3
PRDM2-210ENST00000491815 RPL37AP8A6NKH3 93 aa6.95□□□□□ -1.3
PRDM2-210ENST00000491815 LINC00587B1AMM8 73 aa6.95□□□□□ -1.3
PRDM2-210ENST00000491815 H0Y8G0 127 aa6.95□□□□□ -1.3
PRDM2-210ENST00000491815 LEPROTO15243 131 aa6.95□□□□□ -1.3
PRDM2-210ENST00000491815 DPM2O94777 84 aa6.95□□□□□ -1.3
PRDM2-210ENST00000491815 RPL28P46779 137 aaKnown RBP6.95□□□□□ -1.3
PRDM2-210ENST00000491815 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
PRDM2-210ENST00000491815 Q8NDZ9 215 aa6.95□□□□□ -1.3
PRDM2-210ENST00000491815 PLEKHB2Q96CS7 222 aa6.95□□□□□ -1.3
PRDM2-210ENST00000491815 NDUFA12Q9UI09 145 aa6.95□□□□□ -1.3
PRDM2-210ENST00000491815 MYMXA0A1B0GTQ4 84 aa6.94□□□□□ -1.3
PRDM2-210ENST00000491815 IGKCP01834 107 aa6.94□□□□□ -1.3
PRDM2-210ENST00000491815 LINC00158P58513 81 aa6.94□□□□□ -1.3
PRDM2-210ENST00000491815 COA6Q5JTJ3 125 aaKnown RBP6.94□□□□□ -1.3
PRDM2-210ENST00000491815 MAP1LC3CQ9BXW4 147 aa6.94□□□□□ -1.3
PRDM2-210ENST00000491815 SMIM13P0DJ93 91 aa6.93□□□□□ -1.3
PRDM2-210ENST00000491815 TSPEAR-AS2P59090 65 aa6.93□□□□□ -1.3
PRDM2-210ENST00000491815 HERVK_113P61574 105 aa6.93□□□□□ -1.3
PRDM2-210ENST00000491815 MEIG1Q5JSS6 88 aa6.93□□□□□ -1.3
PRDM2-210ENST00000491815 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
PRDM2-210ENST00000491815 IGKV2-28A0A075B6P5 120 aa6.92□□□□□ -1.3
PRDM2-210ENST00000491815 LOC107984156A0A0G2JMH3 177 aa6.92□□□□□ -1.3
PRDM2-210ENST00000491815 J3QQQ9 107 aa6.92□□□□□ -1.3
PRDM2-210ENST00000491815 IGKV2D-28P01615 120 aa6.92□□□□□ -1.3
PRDM2-210ENST00000491815 RPL13AP40429 203 aaKnown RBP6.92□□□□□ -1.3
PRDM2-210ENST00000491815 NMUP48645 174 aa6.92□□□□□ -1.3
PRDM2-210ENST00000491815 ARL17AQ8IVW1 177 aa6.92□□□□□ -1.3
PRDM2-210ENST00000491815 MIR7-3HGQ8N6C7 128 aa6.92□□□□□ -1.3
PRDM2-210ENST00000491815 PMCHL2Q9BQD1 86 aa6.92□□□□□ -1.3
PRDM2-210ENST00000491815 A0A0U1RRA0 63 aa6.91□□□□□ -1.3
PRDM2-210ENST00000491815 SYS1-DBNDD2H3BUS1 97 aa6.91□□□□□ -1.3
PRDM2-210ENST00000491815 TMEM126AQ9H061 195 aa6.91□□□□□ -1.3
PRDM2-210ENST00000491815 IGKV2D-26A0A0A0MRZ7 120 aa6.9□□□□□ -1.3
PRDM2-210ENST00000491815 M0R378 163 aa6.9□□□□□ -1.3
PRDM2-210ENST00000491815 ATP6V1G1O75348 118 aa6.9□□□□□ -1.3
PRDM2-210ENST00000491815 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
PRDM2-210ENST00000491815 E9PLD3 99 aa6.89□□□□□ -1.31
PRDM2-210ENST00000491815 UBE2AP49459 152 aa6.89□□□□□ -1.31
PRDM2-210ENST00000491815 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
PRDM2-210ENST00000491815 BOD1L2Q8IYS8 172 aa6.89□□□□□ -1.31
PRDM2-210ENST00000491815 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
PRDM2-210ENST00000491815 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
PRDM2-210ENST00000491815 TMEM238C9JI98 176 aa6.88□□□□□ -1.31
PRDM2-210ENST00000491815 LGALS3P17931 250 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms