RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TLX1NBP0CAT3 122 aa7.83□□□□□ -1.16
USF1-206ENST00000491629 C6orf48Q9UBA6 75 aa7.83□□□□□ -1.16
USF1-206ENST00000491629 UBE2D1P51668 147 aa7.82□□□□□ -1.16
USF1-206ENST00000491629 TAL2Q16559 108 aa7.82□□□□□ -1.16
USF1-206ENST00000491629 UNQ6190/PRO20217Q6UXQ8 127 aa7.82□□□□□ -1.16
USF1-206ENST00000491629 IGHV3OR16-9A0A0B4J2B5 98 aa7.81□□□□□ -1.16
USF1-206ENST00000491629 RPL13AP40429 203 aaKnown RBP7.81□□□□□ -1.16
USF1-206ENST00000491629 HBBP68871 147 aa7.81□□□□□ -1.16
USF1-206ENST00000491629 AMN1Q8IY45 258 aa7.81□□□□□ -1.16
USF1-206ENST00000491629 NRACQ8N912 160 aa7.81□□□□□ -1.16
USF1-206ENST00000491629 GAGE2EQ4V326 116 aa7.8□□□□□ -1.16
USF1-206ENST00000491629 GAGE2DQ9UEU5 116 aa7.8□□□□□ -1.16
USF1-206ENST00000491629 A8MWL6 223 aa7.79□□□□□ -1.16
USF1-206ENST00000491629 M0QXV9 152 aa7.79□□□□□ -1.16
USF1-206ENST00000491629 VCYO14598 125 aa7.79□□□□□ -1.16
USF1-206ENST00000491629 KIAA0087Q14695 138 aa7.79□□□□□ -1.16
USF1-206ENST00000491629 C9orf129Q5T035 196 aaKnown RBP7.79□□□□□ -1.16
USF1-206ENST00000491629 PRO0461Q9UI25 63 aa7.79□□□□□ -1.16
USF1-206ENST00000491629 A0A087X002 238 aa7.78□□□□□ -1.16
USF1-206ENST00000491629 A0A1B0GW15 77 aa7.78□□□□□ -1.16
USF1-206ENST00000491629 H3BMG7 143 aa7.78□□□□□ -1.16
USF1-206ENST00000491629 NDUFA1O15239 70 aa7.78□□□□□ -1.16
USF1-206ENST00000491629 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
USF1-206ENST00000491629 FCER1GP30273 86 aa7.78□□□□□ -1.16
USF1-206ENST00000491629 RPL39P62891 51 aaKnown RBP7.78□□□□□ -1.16
USF1-206ENST00000491629 LINC00173Q6ZV60 143 aa7.78□□□□□ -1.16
USF1-206ENST00000491629 TIMM21Q9BVV7 248 aa7.78□□□□□ -1.16
USF1-206ENST00000491629 CDIP1Q9H305 208 aa7.78□□□□□ -1.16
USF1-206ENST00000491629 A0A1B0GUT8 65 aa7.77□□□□□ -1.17
USF1-206ENST00000491629 F8WDY8 70 aa7.77□□□□□ -1.17
USF1-206ENST00000491629 HERV-K104P63124 156 aa7.77□□□□□ -1.17
USF1-206ENST00000491629 Q6Q795 121 aa7.77□□□□□ -1.17
USF1-206ENST00000491629 TP73-AS1Q9UF72 201 aa7.77□□□□□ -1.17
USF1-206ENST00000491629 HIGD1CA8MV81 97 aa7.76□□□□□ -1.17
USF1-206ENST00000491629 ZNF861PO60384 105 aa7.76□□□□□ -1.17
USF1-206ENST00000491629 SUMO2P61956 95 aaKnown RBP7.76□□□□□ -1.17
USF1-206ENST00000491629 UBE2BP63146 152 aa7.76□□□□□ -1.17
USF1-206ENST00000491629 RPL32P62910 135 aaKnown RBP7.75□□□□□ -1.17
USF1-206ENST00000491629 ANAPC13Q9BS18 74 aa7.75□□□□□ -1.17
USF1-206ENST00000491629 SS18L2Q9UHA2 77 aa7.75□□□□□ -1.17
USF1-206ENST00000491629 A0A1B0GWB2 263 aa7.74□□□□□ -1.17
USF1-206ENST00000491629 C2orf82Q6UX34 121 aa7.74□□□□□ -1.17
USF1-206ENST00000491629 RAB37Q96AX2 223 aa7.74□□□□□ -1.17
USF1-206ENST00000491629 ETDBQ3ZM63 59 aa7.73□□□□□ -1.17
USF1-206ENST00000491629 MRPL51Q4U2R6 128 aaKnown RBP7.73□□□□□ -1.17
USF1-206ENST00000491629 PPDPFLQ8WWR9 84 aa7.73□□□□□ -1.17
USF1-206ENST00000491629 KIR2DL4Q99706 377 aa7.73□□□□□ -1.17
USF1-206ENST00000491629 RETNLBQ9BQ08 111 aa7.72□□□□□ -1.17
USF1-206ENST00000491629 TMEM126AQ9H061 195 aa7.72□□□□□ -1.17
USF1-206ENST00000491629 NDUFC2-KCTD14E9PQ53 114 aa7.71□□□□□ -1.18
USF1-206ENST00000491629 MRPS36P82909 103 aaKnown RBP7.71□□□□□ -1.18
USF1-206ENST00000491629 KRTAP13-2Q52LG2 175 aa7.71□□□□□ -1.18
USF1-206ENST00000491629 LYRM7Q5U5X0 104 aa7.71□□□□□ -1.18
USF1-206ENST00000491629 CEND1Q8N111 149 aa7.71□□□□□ -1.18
USF1-206ENST00000491629 NAA38Q9BRA0 125 aaKnown RBP7.71□□□□□ -1.18
USF1-206ENST00000491629 SPANXDQ9BXN6 97 aa7.71□□□□□ -1.18
USF1-206ENST00000491629 SPANXCQ9NY87 97 aa7.71□□□□□ -1.18
USF1-206ENST00000491629 TRBV30A0A0K0K1B3 111 aa7.7□□□□□ -1.18
USF1-206ENST00000491629 FXYD2P54710 66 aa7.7□□□□□ -1.18
USF1-206ENST00000491629 RIGQ13278 110 aa7.7□□□□□ -1.18
USF1-206ENST00000491629 C20orf78Q9BR46 151 aa7.7□□□□□ -1.18
USF1-206ENST00000491629 ANAPC11Q9NYG5 84 aa7.7□□□□□ -1.18
USF1-206ENST00000491629 B5MCH6 92 aa7.69□□□□□ -1.18
USF1-206ENST00000491629 PPP1R17O96001 155 aa7.69□□□□□ -1.18
USF1-206ENST00000491629 MT-ATP8P03928 68 aa7.69□□□□□ -1.18
USF1-206ENST00000491629 LINC00242Q5T6M2 205 aa7.69□□□□□ -1.18
USF1-206ENST00000491629 FAM104BQ5XKR9 115 aa7.69□□□□□ -1.18
USF1-206ENST00000491629 C22orf24Q9Y442 160 aa7.69□□□□□ -1.18
USF1-206ENST00000491629 LINC01546A6NGU7 62 aa7.68□□□□□ -1.18
USF1-206ENST00000491629 C5orf47Q569G3 176 aa7.68□□□□□ -1.18
USF1-206ENST00000491629 TYMSOSQ8TAI1 123 aa7.68□□□□□ -1.18
USF1-206ENST00000491629 PRELID3AQ96N28 172 aa7.68□□□□□ -1.18
USF1-206ENST00000491629 HBDP02042 147 aa7.67□□□□□ -1.18
USF1-206ENST00000491629 TEN1Q86WV5 123 aa7.67□□□□□ -1.18
USF1-206ENST00000491629 SMIM20Q8N5G0 67 aa7.67□□□□□ -1.18
USF1-206ENST00000491629 SMIM2Q9BVW6 85 aa7.67□□□□□ -1.18
USF1-206ENST00000491629 MAP1LC3AQ9H492 121 aa7.67□□□□□ -1.18
USF1-206ENST00000491629 A0A096LNJ9 63 aa7.66□□□□□ -1.18
USF1-206ENST00000491629 TNFRSF6BO95407 300 aa7.66□□□□□ -1.18
USF1-206ENST00000491629 CRYGAP11844 174 aa7.66□□□□□ -1.18
USF1-206ENST00000491629 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
USF1-206ENST00000491629 IFI27L1Q96BM0 104 aa7.66□□□□□ -1.18
USF1-206ENST00000491629 NDUFV3P56181 108 aaKnown RBP7.65□□□□□ -1.18
USF1-206ENST00000491629 LCE2DQ5TA82 110 aaPredicted RBP7.65□□□□□ -1.18
USF1-206ENST00000491629 PCP2Q8IVA1 136 aa7.65□□□□□ -1.18
USF1-206ENST00000491629 XAGE1AQ9HD64 81 aa7.65□□□□□ -1.18
USF1-206ENST00000491629 NHP2Q9NX24 153 aaKnown RBP7.65□□□□□ -1.18
USF1-206ENST00000491629 IGLV4-3A0A075B6K6 122 aa7.64□□□□□ -1.19
USF1-206ENST00000491629 TRBV20-1A0A075B6N2 111 aa7.64□□□□□ -1.19
USF1-206ENST00000491629 ATP5LO75964 103 aa7.64□□□□□ -1.19
USF1-206ENST00000491629 NPYP01303 97 aa7.64□□□□□ -1.19
USF1-206ENST00000491629 ZC2HC1BQ5TFG8 222 aa7.64□□□□□ -1.19
USF1-206ENST00000491629 BCE1O60756 84 aa7.63□□□□□ -1.19
USF1-206ENST00000491629 IFITM1P13164 125 aa7.63□□□□□ -1.19
USF1-206ENST00000491629 CKS2P33552 79 aa7.63□□□□□ -1.19
USF1-206ENST00000491629 NMUP48645 174 aa7.63□□□□□ -1.19
USF1-206ENST00000491629 SMCPP49901 116 aaPredicted RBP7.63□□□□□ -1.19
USF1-206ENST00000491629 KRTAP13-1Q8IUC0 172 aa7.63□□□□□ -1.19
USF1-206ENST00000491629 FSIP2Q5CZC0 6907 aa7.62□□□□□ -1.19
USF1-206ENST00000491629 D6R8Y8 96 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms