RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334		M0R2T5	61 aa		10.58	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	COX17	Q14061	63 aa		10.58	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	IGLV8-61	A0A075B6I0	122 aa		10.57	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334		C9JQL5	133 aa		10.57	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	SSBP3-AS1	Q7Z2R9	100 aa		10.57	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	AKAP14	Q86UN6	197 aa		10.57	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	ERG28	Q9UKR5	140 aa		10.57	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	10.56	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334		H3BRM9	83 aa		10.56	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	SMCR5	Q8TEV8	140 aa		10.56	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	PCOTH	Q58A44	107 aa		10.55	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334		Q8NDZ9	215 aa		10.55	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	CST9L	Q9H4G1	147 aa		10.55	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	PEA15	Q15121	130 aa		10.54	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	LINC00483	Q53H64	154 aa		10.53	□□□□□ -0.72
CDK5RAP2-218	ENST00000491334	ADCYAP1	P18509	176 aa		10.52	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	MOBP	Q13875	183 aa		10.52	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	IGLV9-49	A0A0B4J1Y8	123 aa		10.51	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	LINC01549	A6NIU2	74 aa		10.51	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	GAGE2A	Q6NT46	116 aa		10.51	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	IGLV5-39	A0A0G2JS06	123 aa		10.5	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	PMVK	Q15126	192 aa		10.5	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	ZNF625	Q96I27	306 aa	Predicted RBP	10.5	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	PRY	O14603	147 aa		10.49	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	ETDC	A0A1B0GVM5	59 aa		10.47	□□□□□ -0.73
CDK5RAP2-218	ENST00000491334	SPRR1A	P35321	89 aa		10.45	□□□□□ -0.74
CDK5RAP2-218	ENST00000491334	SFTA2	Q6UW10	78 aa		10.45	□□□□□ -0.74
CDK5RAP2-218	ENST00000491334	KCNQ1DN	Q9H478	68 aa		10.45	□□□□□ -0.74
CDK5RAP2-218	ENST00000491334	LINC00158	P58513	81 aa		10.44	□□□□□ -0.74
CDK5RAP2-218	ENST00000491334	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP2-218	ENST00000491334	COX6B2	Q6YFQ2	88 aa		10.42	□□□□□ -0.74
CDK5RAP2-218	ENST00000491334	IGLC3	P0DOY3	106 aa		10.41	□□□□□ -0.74
CDK5RAP2-218	ENST00000491334	ANAPC16	Q96DE5	110 aa		10.4	□□□□□ -0.74
CDK5RAP2-218	ENST00000491334	MT-ND4L	P03901	98 aa		10.39	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	ZNF22	P17026	224 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	S100A12	P80511	92 aa		10.39	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	KIAA1644	Q3SXP7	199 aa		10.39	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	C9orf92	A6NGG3	77 aa		10.38	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	LINC01546	A6NGU7	62 aa		10.37	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	ERC2-IT1	O76042	136 aa		10.37	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	NDUFA6	P56556	154 aa		10.37	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	BOD1L2	Q8IYS8	172 aa		10.37	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	TRAV9-1	A0A075B6T8	112 aa		10.36	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334		A0A0U1RRA0	63 aa		10.36	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	ATP6V1G1	O75348	118 aa		10.36	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	C9orf153	Q5TBE3	101 aa		10.36	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334		B5MCH6	92 aa		10.35	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	NCR3	O14931	201 aa		10.35	□□□□□ -0.75
CDK5RAP2-218	ENST00000491334	TRBV10-3	A0A0K0K1G6	114 aa		10.33	□□□□□ -0.76
CDK5RAP2-218	ENST00000491334	FLG	P20930	4061 aa	Predicted RBP	10.32	□□□□□ -0.76
CDK5RAP2-218	ENST00000491334	LIMD2	Q9BT23	127 aa		10.32	□□□□□ -0.76
CDK5RAP2-218	ENST00000491334	TMEM170B	Q5T4T1	132 aa		10.3	□□□□□ -0.76
CDK5RAP2-218	ENST00000491334	FA2H	Q7L5A8	372 aa		10.3	□□□□□ -0.76
CDK5RAP2-218	ENST00000491334	SMCO4	Q9NRQ5	59 aa		10.3	□□□□□ -0.76
CDK5RAP2-218	ENST00000491334	IGLV6-57	P01721	117 aa		10.29	□□□□□ -0.76
CDK5RAP2-218	ENST00000491334		Q9BRP9	147 aa		10.29	□□□□□ -0.76
CDK5RAP2-218	ENST00000491334	SMIM13	P0DJ93	91 aa		10.28	□□□□□ -0.76
CDK5RAP2-218	ENST00000491334		Q6ZRX8	168 aa		10.27	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	C11orf86	A6NJI1	115 aa		10.26	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	MIR7-3HG	Q8N6C7	128 aa		10.25	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	MEIG1	Q5JSS6	88 aa		10.24	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	DDT	P30046	118 aa		10.23	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	JOSD1	Q15040	202 aa	Predicted RBP	10.23	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	HRCT1	Q6UXD1	115 aa		10.23	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	BAGE3	Q86Y29	109 aa		10.23	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	LINC00587	B1AMM8	73 aa		10.22	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	CFC1	P0CG37	223 aa		10.21	□□□□□ -0.77
CDK5RAP2-218	ENST00000491334	hCG_2014768	A0A024R1R8	64 aa		10.2	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	RPL37	P61927	97 aa	Known RBP	10.19	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	HERV-K104	P63124	156 aa		10.19	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334		A0A096LNJ9	63 aa		10.18	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	TRBV10-2	A0A0K0K1G8	114 aa		10.18	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	C5orf52	A6NGY3	159 aa		10.18	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	MAP1LC3C	Q9BXW4	147 aa		10.18	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	SSPO	A2VEC9	5147 aa		10.18	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	TMEM223	A0PJW6	202 aa		10.17	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	SLC25A34	Q6PIV7	304 aa		10.16	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	ST20-AS1	Q8NBB2	130 aa		10.16	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	HBD	P02042	147 aa		10.15	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.15	□□□□□ -0.78
CDK5RAP2-218	ENST00000491334	USH2A	O75445	5202 aa		10.14	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	LOC107984156	A0A0G2JMH3	177 aa		10.13	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	LINC00614	P0C842	121 aa		10.13	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	FABP9	Q0Z7S8	132 aa		10.13	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	S100A7L2	Q5SY68	101 aa		10.13	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334		Q6Q795	121 aa		10.13	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	ARL17A	Q8IVW1	177 aa		10.13	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	COX19	Q49B96	90 aa		10.12	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	10.12	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	CD164	Q04900	197 aa		10.11	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	MYMX	A0A1B0GTQ4	84 aa		10.1	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	PMCHL1	Q16048	86 aa		10.1	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	LAMTOR3	Q9UHA4	124 aa		10.1	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	TRAV23DV6	A0A075B6W5	121 aa		10.09	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	SPRR1B	P22528	89 aa		10.09	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	S100P	P25815	95 aa		10.09	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	HINT1	P49773	126 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP2-218	ENST00000491334	ZNF73	O43830	326 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	KRTAP9-8	Q9BYQ0	159 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms