RNA–Protein interactions for RNA: ENST00000491311.1

CDK11A-219, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-219ENST00000491311 C2orf91Q6ZV80 131 aa9.6□□□□□ -0.87
CDK11A-219ENST00000491311 LINC00518Q8N0U6 118 aa9.6□□□□□ -0.87
CDK11A-219ENST00000491311 LINC00474Q9P2X8 69 aa9.6□□□□□ -0.87
CDK11A-219ENST00000491311 SCXQ7RTU7 201 aa9.59□□□□□ -0.87
CDK11A-219ENST00000491311 Q8NDZ9 215 aa9.59□□□□□ -0.87
CDK11A-219ENST00000491311 MIEN1Q9BRT3 115 aa9.59□□□□□ -0.87
CDK11A-219ENST00000491311 DNAH5Q8TE73 4624 aa9.58□□□□□ -0.88
CDK11A-219ENST00000491311 SRSF9Q13242 221 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDK11A-219ENST00000491311 CIRBP-AS1Q8TBR5 109 aa9.58□□□□□ -0.88
CDK11A-219ENST00000491311 LINC00308Q8TCZ7 52 aa9.58□□□□□ -0.88
CDK11A-219ENST00000491311 SPANXDQ9BXN6 97 aa9.58□□□□□ -0.88
CDK11A-219ENST00000491311 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
CDK11A-219ENST00000491311 UQCR10Q9UDW1 63 aa9.58□□□□□ -0.88
CDK11A-219ENST00000491311 KRTAP7-1Q8IUC3 87 aa9.57□□□□□ -0.88
CDK11A-219ENST00000491311 HIST1H4GQ99525 98 aa9.56□□□□□ -0.88
CDK11A-219ENST00000491311 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
CDK11A-219ENST00000491311 PKHD1P08F94 4074 aa9.56□□□□□ -0.88
CDK11A-219ENST00000491311 M0QXV9 152 aa9.55□□□□□ -0.88
CDK11A-219ENST00000491311 NCR3O14931 201 aa9.55□□□□□ -0.88
CDK11A-219ENST00000491311 VPREB1P12018 145 aa9.55□□□□□ -0.88
CDK11A-219ENST00000491311 XGP55808 180 aa9.55□□□□□ -0.88
CDK11A-219ENST00000491311 PRR3P79522 188 aaKnown RBP9.55□□□□□ -0.88
CDK11A-219ENST00000491311 MUSTN1Q8IVN3 82 aa9.55□□□□□ -0.88
CDK11A-219ENST00000491311 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
CDK11A-219ENST00000491311 DYNC1H1Q14204 4646 aaKnown RBP9.54□□□□□ -0.88
CDK11A-219ENST00000491311 HNRNPA3P51991 378 aaKnown RBP9.54□□□□□ -0.88
CDK11A-219ENST00000491311 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
CDK11A-219ENST00000491311 NKAPP1Q8N9T2 125 aa9.54□□□□□ -0.88
CDK11A-219ENST00000491311 HIGD1BQ9P298 99 aa9.54□□□□□ -0.88
CDK11A-219ENST00000491311 GAGE10A6NGK3 116 aa9.53□□□□□ -0.88
CDK11A-219ENST00000491311 TSTD3H0UI37 97 aa9.52□□□□□ -0.89
CDK11A-219ENST00000491311 IFITM1P13164 125 aa9.52□□□□□ -0.89
CDK11A-219ENST00000491311 RPL24P83731 157 aaKnown RBP9.52□□□□□ -0.89
CDK11A-219ENST00000491311 Q6ZVH6 145 aa9.52□□□□□ -0.89
CDK11A-219ENST00000491311 PLA2G2DQ9UNK4 145 aa9.52□□□□□ -0.89
CDK11A-219ENST00000491311 C22orf24Q9Y442 160 aa9.52□□□□□ -0.89
CDK11A-219ENST00000491311 LOC107984156A0A0G2JMH3 177 aa9.51□□□□□ -0.89
CDK11A-219ENST00000491311 ARL17AQ8IVW1 177 aa9.51□□□□□ -0.89
CDK11A-219ENST00000491311 SMR3BP02814 79 aaPredicted RBP9.5□□□□□ -0.89
CDK11A-219ENST00000491311 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
CDK11A-219ENST00000491311 MRPL55Q7Z7F7 128 aaKnown RBP9.49□□□□□ -0.89
CDK11A-219ENST00000491311 C7orf33Q8WU49 177 aa9.49□□□□□ -0.89
CDK11A-219ENST00000491311 COPS9Q8WXC6 57 aa9.49□□□□□ -0.89
CDK11A-219ENST00000491311 RPL37AP8A6NKH3 93 aa9.48□□□□□ -0.89
CDK11A-219ENST00000491311 CDK2AP2O75956 126 aa9.48□□□□□ -0.89
CDK11A-219ENST00000491311 UBE2BP63146 152 aa9.48□□□□□ -0.89
CDK11A-219ENST00000491311 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
CDK11A-219ENST00000491311 A4D1N5 150 aa9.47□□□□□ -0.89
CDK11A-219ENST00000491311 EPM2AB3EWF7 344 aa9.47□□□□□ -0.89
CDK11A-219ENST00000491311 M0R378 163 aa9.47□□□□□ -0.89
CDK11A-219ENST00000491311 HSD52Q0P140 79 aa9.47□□□□□ -0.89
CDK11A-219ENST00000491311 LRP1BQ9NZR2 4599 aa9.46□□□□□ -0.89
CDK11A-219ENST00000491311 IGKV2-28A0A075B6P5 120 aa9.46□□□□□ -0.9
CDK11A-219ENST00000491311 NDUFC2O95298 119 aa9.46□□□□□ -0.9
CDK11A-219ENST00000491311 IGKV2D-28P01615 120 aa9.46□□□□□ -0.9
CDK11A-219ENST00000491311 TAL2Q16559 108 aa9.46□□□□□ -0.9
CDK11A-219ENST00000491311 KRTAP11-1Q8IUC1 163 aa9.46□□□□□ -0.9
CDK11A-219ENST00000491311 CEND1Q8N111 149 aa9.46□□□□□ -0.9
CDK11A-219ENST00000491311 FXYD2P54710 66 aa9.45□□□□□ -0.9
CDK11A-219ENST00000491311 CTAG1AP78358 180 aa9.45□□□□□ -0.9
CDK11A-219ENST00000491311 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
CDK11A-219ENST00000491311 OR13C6PQ8NH95 151 aa9.45□□□□□ -0.9
CDK11A-219ENST00000491311 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
CDK11A-219ENST00000491311 PPDPFQ9H3Y8 114 aa9.44□□□□□ -0.9
CDK11A-219ENST00000491311 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
CDK11A-219ENST00000491311 S100A7L2Q5SY68 101 aa9.43□□□□□ -0.9
CDK11A-219ENST00000491311 LINC00337Q8N6G1 96 aa9.43□□□□□ -0.9
CDK11A-219ENST00000491311 TRBV10-2A0A0K0K1G8 114 aa9.42□□□□□ -0.9
CDK11A-219ENST00000491311 DDTP30046 118 aa9.42□□□□□ -0.9
CDK11A-219ENST00000491311 DNAH8Q96JB1 4490 aa9.42□□□□□ -0.9
CDK11A-219ENST00000491311 A6NDN8 102 aa9.41□□□□□ -0.9
CDK11A-219ENST00000491311 HINT1P49773 126 aaPredicted RBP9.41□□□□□ -0.9
CDK11A-219ENST00000491311 IGLV1-50A0A075B6I6 118 aa9.4□□□□□ -0.9
CDK11A-219ENST00000491311 PCP4L1A6NKN8 68 aa9.39□□□□□ -0.91
CDK11A-219ENST00000491311 NHP2Q9NX24 153 aaKnown RBP9.39□□□□□ -0.91
CDK11A-219ENST00000491311 PSORS1C2Q9UIG4 136 aa9.39□□□□□ -0.91
CDK11A-219ENST00000491311 APOBP04114 4563 aaKnown RBP9.39□□□□□ -0.91
CDK11A-219ENST00000491311 TMEM238LA0A1B0GVL6 79 aa9.38□□□□□ -0.91
CDK11A-219ENST00000491311 A6NJY4 79 aa9.38□□□□□ -0.91
CDK11A-219ENST00000491311 IGLV6-57P01721 117 aa9.38□□□□□ -0.91
CDK11A-219ENST00000491311 CFC1BP0CG36 223 aa9.38□□□□□ -0.91
CDK11A-219ENST00000491311 CFC1P0CG37 223 aa9.38□□□□□ -0.91
CDK11A-219ENST00000491311 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
CDK11A-219ENST00000491311 RPL37AP61513 92 aaKnown RBP9.38□□□□□ -0.91
CDK11A-219ENST00000491311 BVES-AS1Q5T3Y7 98 aa9.38□□□□□ -0.91
CDK11A-219ENST00000491311 RAB37Q96AX2 223 aa9.38□□□□□ -0.91
CDK11A-219ENST00000491311 H7C2G1 150 aa9.37□□□□□ -0.91
CDK11A-219ENST00000491311 K7ERJ3 54 aa9.37□□□□□ -0.91
CDK11A-219ENST00000491311 C1orf137Q5JT78 98 aa9.37□□□□□ -0.91
CDK11A-219ENST00000491311 TRAV23DV6A0A075B6W5 121 aa9.36□□□□□ -0.91
CDK11A-219ENST00000491311 TRAV13-2A0A0B4J235 113 aa9.36□□□□□ -0.91
CDK11A-219ENST00000491311 BATFQ16520 125 aa9.36□□□□□ -0.91
CDK11A-219ENST00000491311 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
CDK11A-219ENST00000491311 TMEM126AQ9H061 195 aa9.36□□□□□ -0.91
CDK11A-219ENST00000491311 HERC2O95714 4834 aa9.35□□□□□ -0.91
CDK11A-219ENST00000491311 M0R143 59 aa9.35□□□□□ -0.91
CDK11A-219ENST00000491311 PRYO14603 147 aa9.35□□□□□ -0.91
CDK11A-219ENST00000491311 Q5VSD8 79 aa9.35□□□□□ -0.91
CDK11A-219ENST00000491311 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
CDK11A-219ENST00000491311 PCLOQ9Y6V0 5065 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms