RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 C14orf132Q9NPU4 83 aa1.37□□□□□ -2.19
SNRNP40-207ENST00000491106 ZFHX2Q9C0A1 2572 aaPredicted RBP1.37□□□□□ -2.19
SNRNP40-207ENST00000491106 WNK1Q9H4A3 2382 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 ANKHD1Q8IWZ3 2542 aaKnown RBP1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 ABCA2Q9BZC7 2435 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 SMIM26A0A096LP01 95 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 GVQW2A0A096LPI5 108 aaPredicted RBP1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 IGKV3D-7A0A0C4DH55 119 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 IGKV3OR2-268A0A0C4DH90 116 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 LOC100131303A0A0U1RQF7 123 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 H3BNG1 76 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 NCR3O14931 201 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 ERC2-IT1O76042 136 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 SPART-AS1P0CW21 52 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 ATRXP46100 2492 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 XCL1P47992 114 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 PRR3P79522 188 aaKnown RBP1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 CXCL6P80162 114 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 HAMPP81172 84 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 REG3AQ06141 175 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 C9orf129Q5T035 196 aaKnown RBP1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 C9orf66Q5T8R8 295 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 Q6ZQT0 140 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 ADGRG4Q8IZF6 3080 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 LINC00269Q8N2A0 174 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 TYMSOSQ8TAI1 123 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 C11orf45Q8TAV5 145 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 CHCHD10Q8WYQ3 142 aaPredicted RBP1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 UPK3BQ9BT76 320 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 ESM1Q9NQ30 184 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 LAMTOR3Q9UHA4 124 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 ATMQ13315 3056 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 TEX15Q9BXT5 2789 aa1.36□□□□□ -2.19
SNRNP40-207ENST00000491106 HRNRQ86YZ3 2850 aaPredicted RBP1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 CEP295Q9C0D2 2601 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 TRAV23DV6A0A075B6W5 121 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 EPM2AB3EWF7 344 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 M0R378 163 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 IGLV6-57P01721 117 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 ANGP03950 147 aaKnown RBP1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 DEFB130BP0DP73 79 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 DEFB130AP0DP74 79 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 MIFP14174 115 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 APOC4P55056 127 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 KLKP1Q107X0 134 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 NREPQ16612 68 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 C6orf99Q4VX62 202 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 LCE3EQ5T5B0 92 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 LELP1Q5T871 98 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 REG3GQ6UW15 175 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 ENHOQ6UWT2 76 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 WFDC9Q8NEX5 89 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 SERP1Q9Y6X1 66 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 BOD1L1Q8NFC6 3051 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 MYO15AQ9UKN7 3530 aa1.35□□□□□ -2.19
SNRNP40-207ENST00000491106 ZFHX4Q86UP3 3567 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 ANKRD11Q6UB99 2663 aaPredicted RBP1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 DCHS1Q96JQ0 3298 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 TRBV7-4A0A0J9YYF1 115 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 COX7BP24311 80 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 ATP5EP56381 51 aaPredicted RBP1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 DAD1P61803 113 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 EGFEM1PQ0D2K5 195 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 LCE3AQ5TA76 89 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 Q6ZVQ6 151 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 FAM19A1Q7Z5A9 133 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 C20orf197Q8N268 126 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 C3orf56Q8N813 242 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 MRAPQ8TCY5 172 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 DIRC1Q969H9 104 aa1.34□□□□□ -2.19
SNRNP40-207ENST00000491106 CRYBG3Q68DQ2 2970 aa1.34□□□□□ -2.2
SNRNP40-207ENST00000491106 UTP20O75691 2785 aaKnown RBP1.34□□□□□ -2.2
SNRNP40-207ENST00000491106 NBASA2RRP1 2371 aa1.34□□□□□ -2.2
SNRNP40-207ENST00000491106 DMDP11532 3685 aa1.34□□□□□ -2.2
SNRNP40-207ENST00000491106 CSMD1Q96PZ7 3565 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 ASH1LQ9NR48 2969 aaKnown RBP1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 IGLV5-48A0A075B6I7 105 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 A0A087WVE0 104 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 A0A096LPF7 62 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 TRAV10A0A0B4J240 114 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 H7BZZ5 65 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 RTL8CO15255 209 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 ZNF73O43830 326 aaPredicted RBP1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 ELOF1P60002 83 aaKnown RBP1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 C4orf26Q17RF5 130 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 C9orf116Q5BN46 136 aaPredicted RBP1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 Q6ZQY7 126 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 KRTAP11-1Q8IUC1 163 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 C11orf68Q9H3H3 251 aaKnown RBP1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 KLK12Q9UKR0 248 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 TLN1Q9Y490 2541 aaKnown RBP1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 CELSR1Q9NYQ6 3014 aa1.33□□□□□ -2.2
SNRNP40-207ENST00000491106 PTPN13Q12923 2485 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 SMG1Q96Q15 3661 aaKnown RBP1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 IGLV10-54A0A075B6I4 117 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 FAM236DA0A1B0GTK5 79 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 RPL37AP8A6NKH3 93 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 H0Y9J4 135 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms