RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 LINC01546A6NGU7 62 aa11.62□□□□□ -0.55
CLIP2-208ENST00000491075 SPINK1P00995 79 aa11.61□□□□□ -0.55
CLIP2-208ENST00000491075 DAND5Q8N907 189 aa11.61□□□□□ -0.55
CLIP2-208ENST00000491075 IGLC3P0DOY3 106 aa11.6□□□□□ -0.55
CLIP2-208ENST00000491075 SFTA2Q6UW10 78 aa11.58□□□□□ -0.56
CLIP2-208ENST00000491075 ZNF625Q96I27 306 aaPredicted RBP11.58□□□□□ -0.56
CLIP2-208ENST00000491075 NDUFA12Q9UI09 145 aa11.58□□□□□ -0.56
CLIP2-208ENST00000491075 ZNF22P17026 224 aaPredicted RBP11.56□□□□□ -0.56
CLIP2-208ENST00000491075 A0A1B0GVG6 124 aa11.55□□□□□ -0.56
CLIP2-208ENST00000491075 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
CLIP2-208ENST00000491075 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
CLIP2-208ENST00000491075 SMCO4Q9NRQ5 59 aa11.54□□□□□ -0.56
CLIP2-208ENST00000491075 TRAV9-1A0A075B6T8 112 aa11.53□□□□□ -0.56
CLIP2-208ENST00000491075 PRYO14603 147 aa11.53□□□□□ -0.56
CLIP2-208ENST00000491075 NDUFA6P56556 154 aa11.52□□□□□ -0.57
CLIP2-208ENST00000491075 RPS29P62273 56 aaKnown RBP11.52□□□□□ -0.57
CLIP2-208ENST00000491075 LINC00158P58513 81 aa11.5□□□□□ -0.57
CLIP2-208ENST00000491075 LINC00483Q53H64 154 aa11.5□□□□□ -0.57
CLIP2-208ENST00000491075 SMCR5Q8TEV8 140 aa11.5□□□□□ -0.57
CLIP2-208ENST00000491075 SPRR1AP35321 89 aa11.49□□□□□ -0.57
CLIP2-208ENST00000491075 XP32Q5T750 250 aa11.49□□□□□ -0.57
CLIP2-208ENST00000491075 Q8N377 158 aa11.49□□□□□ -0.57
CLIP2-208ENST00000491075 ETDCA0A1B0GVM5 59 aa11.47□□□□□ -0.57
CLIP2-208ENST00000491075 SLC25A20O43772 301 aa11.46□□□□□ -0.57
CLIP2-208ENST00000491075 MOBPQ13875 183 aa11.46□□□□□ -0.57
CLIP2-208ENST00000491075 TMEM170BQ5T4T1 132 aa11.46□□□□□ -0.57
CLIP2-208ENST00000491075 LCE2CQ5TA81 110 aa11.46□□□□□ -0.57
CLIP2-208ENST00000491075 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.57
CLIP2-208ENST00000491075 A0A096LNJ9 63 aa11.45□□□□□ -0.58
CLIP2-208ENST00000491075 C11orf86A6NJI1 115 aa11.45□□□□□ -0.58
CLIP2-208ENST00000491075 KRTAP4-16G5E9R7 235 aaPredicted RBP11.45□□□□□ -0.58
CLIP2-208ENST00000491075 SSBP3-AS1Q7Z2R9 100 aa11.44□□□□□ -0.58
CLIP2-208ENST00000491075 IGLV9-49A0A0B4J1Y8 123 aa11.43□□□□□ -0.58
CLIP2-208ENST00000491075 A0A0U1RRA0 63 aa11.43□□□□□ -0.58
CLIP2-208ENST00000491075 NCR3O14931 201 aa11.43□□□□□ -0.58
CLIP2-208ENST00000491075 S100PP25815 95 aa11.43□□□□□ -0.58
CLIP2-208ENST00000491075 COX19Q49B96 90 aa11.43□□□□□ -0.58
CLIP2-208ENST00000491075 GAGE2AQ6NT46 116 aa11.43□□□□□ -0.58
CLIP2-208ENST00000491075 BOD1L2Q8IYS8 172 aa11.43□□□□□ -0.58
CLIP2-208ENST00000491075 ATP6V1G1O75348 118 aa11.41□□□□□ -0.58
CLIP2-208ENST00000491075 HBDP02042 147 aa11.4□□□□□ -0.58
CLIP2-208ENST00000491075 FABP9Q0Z7S8 132 aa11.4□□□□□ -0.58
CLIP2-208ENST00000491075 BAGE3Q86Y29 109 aa11.4□□□□□ -0.58
CLIP2-208ENST00000491075 CFC1BP0CG36 223 aa11.39□□□□□ -0.59
CLIP2-208ENST00000491075 S100A12P80511 92 aa11.39□□□□□ -0.59
CLIP2-208ENST00000491075 SMIM13P0DJ93 91 aa11.38□□□□□ -0.59
CLIP2-208ENST00000491075 MT1HP80294 61 aa11.38□□□□□ -0.59
CLIP2-208ENST00000491075 KRTAP19-2Q3LHN2 52 aa11.38□□□□□ -0.59
CLIP2-208ENST00000491075 TRBV10-3A0A0K0K1G6 114 aa11.37□□□□□ -0.59
CLIP2-208ENST00000491075 B5MCH6 92 aa11.36□□□□□ -0.59
CLIP2-208ENST00000491075 MEIG1Q5JSS6 88 aa11.36□□□□□ -0.59
CLIP2-208ENST00000491075 MIR7-3HGQ8N6C7 128 aa11.36□□□□□ -0.59
CLIP2-208ENST00000491075 ERC2-IT1O76042 136 aa11.35□□□□□ -0.59
CLIP2-208ENST00000491075 LINC00614P0C842 121 aa11.35□□□□□ -0.59
CLIP2-208ENST00000491075 URB1-AS1Q96HZ7 61 aa11.35□□□□□ -0.59
CLIP2-208ENST00000491075 TMEM223A0PJW6 202 aa11.34□□□□□ -0.59
CLIP2-208ENST00000491075 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
CLIP2-208ENST00000491075 SEC11CQ9BY50 192 aa11.34□□□□□ -0.59
CLIP2-208ENST00000491075 CHTOPQ9Y3Y2 248 aaKnown RBP11.34□□□□□ -0.59
CLIP2-208ENST00000491075 C18orf32Q8TCD1 76 aa11.33□□□□□ -0.6
CLIP2-208ENST00000491075 HERV-K104P63124 156 aa11.32□□□□□ -0.6
CLIP2-208ENST00000491075 LINC00587B1AMM8 73 aa11.31□□□□□ -0.6
CLIP2-208ENST00000491075 Q9BRP9 147 aa11.31□□□□□ -0.6
CLIP2-208ENST00000491075 TMEM218A2RU14 115 aa11.3□□□□□ -0.6
CLIP2-208ENST00000491075 Q6ZRX8 168 aa11.3□□□□□ -0.6
CLIP2-208ENST00000491075 C9orf153Q5TBE3 101 aa11.29□□□□□ -0.6
CLIP2-208ENST00000491075 UQCC3Q6UW78 93 aa11.29□□□□□ -0.6
CLIP2-208ENST00000491075 DDTP30046 118 aa11.28□□□□□ -0.6
CLIP2-208ENST00000491075 PCOTHQ58A44 107 aa11.28□□□□□ -0.6
CLIP2-208ENST00000491075 CLLU1Q5K131 121 aa11.28□□□□□ -0.6
CLIP2-208ENST00000491075 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
CLIP2-208ENST00000491075 IGLV8-61A0A075B6I0 122 aa11.27□□□□□ -0.61
CLIP2-208ENST00000491075 TRBV10-2A0A0K0K1G8 114 aa11.26□□□□□ -0.61
CLIP2-208ENST00000491075 LORP23490 312 aaPredicted RBP11.26□□□□□ -0.61
CLIP2-208ENST00000491075 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
CLIP2-208ENST00000491075 KRTAP10-6P60371 365 aaPredicted RBP11.24□□□□□ -0.61
CLIP2-208ENST00000491075 TRAPPC1Q9Y5R8 145 aa11.24□□□□□ -0.61
CLIP2-208ENST00000491075 LOC107984156A0A0G2JMH3 177 aa11.23□□□□□ -0.61
CLIP2-208ENST00000491075 MYMXA0A1B0GTQ4 84 aa11.23□□□□□ -0.61
CLIP2-208ENST00000491075 ARL17AQ8IVW1 177 aa11.23□□□□□ -0.61
CLIP2-208ENST00000491075 JOSD1Q15040 202 aaPredicted RBP11.22□□□□□ -0.61
CLIP2-208ENST00000491075 LIMD2Q9BT23 127 aa11.22□□□□□ -0.61
CLIP2-208ENST00000491075 IFI27L1Q96BM0 104 aa11.21□□□□□ -0.61
CLIP2-208ENST00000491075 SPANXB1Q9NS25 103 aaPredicted RBP11.21□□□□□ -0.61
CLIP2-208ENST00000491075 RHEBQ15382 184 aa11.19□□□□□ -0.62
CLIP2-208ENST00000491075 C9orf92A6NGG3 77 aa11.18□□□□□ -0.62
CLIP2-208ENST00000491075 S100A7L2Q5SY68 101 aa11.18□□□□□ -0.62
CLIP2-208ENST00000491075 RPS10P5Q9NQ39 176 aa11.18□□□□□ -0.62
CLIP2-208ENST00000491075 IGLV6-57P01721 117 aa11.17□□□□□ -0.62
CLIP2-208ENST00000491075 MIEN1Q9BRT3 115 aa11.17□□□□□ -0.62
CLIP2-208ENST00000491075 TRAV23DV6A0A075B6W5 121 aa11.16□□□□□ -0.62
CLIP2-208ENST00000491075 C5orf52A6NGY3 159 aa11.16□□□□□ -0.62
CLIP2-208ENST00000491075 ST20-AS1Q8NBB2 130 aa11.15□□□□□ -0.62
CLIP2-208ENST00000491075 M0R2T5 61 aa11.14□□□□□ -0.63
CLIP2-208ENST00000491075 NDUFC2O95298 119 aa11.14□□□□□ -0.63
CLIP2-208ENST00000491075 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
CLIP2-208ENST00000491075 TSPEAR-AS2P59090 65 aa11.13□□□□□ -0.63
CLIP2-208ENST00000491075 IFITM2Q01629 132 aa11.13□□□□□ -0.63
CLIP2-208ENST00000491075 ZNF73O43830 326 aaPredicted RBP11.12□□□□□ -0.63
CLIP2-208ENST00000491075 SLC25A34Q6PIV7 304 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms