RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 HBDP02042 147 aa8.63□□□□□ -1.03
SCAMP3-208ENST00000490999 TMEM126AQ9H061 195 aa8.63□□□□□ -1.03
SCAMP3-208ENST00000490999 H3BRM9 83 aa8.62□□□□□ -1.03
SCAMP3-208ENST00000490999 SEC61BP60468 96 aaKnown RBP8.62□□□□□ -1.03
SCAMP3-208ENST00000490999 CTAG1AP78358 180 aa8.62□□□□□ -1.03
SCAMP3-208ENST00000490999 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
SCAMP3-208ENST00000490999 DAND5Q8N907 189 aa8.62□□□□□ -1.03
SCAMP3-208ENST00000490999 COX7B2Q8TF08 81 aa8.62□□□□□ -1.03
SCAMP3-208ENST00000490999 PLEKHB2Q96CS7 222 aa8.62□□□□□ -1.03
SCAMP3-208ENST00000490999 URB1-AS1Q96HZ7 61 aa8.62□□□□□ -1.03
SCAMP3-208ENST00000490999 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
SCAMP3-208ENST00000490999 A0A096LNJ9 63 aa8.61□□□□□ -1.03
SCAMP3-208ENST00000490999 M0R378 163 aa8.6□□□□□ -1.03
SCAMP3-208ENST00000490999 ATP5LO75964 103 aa8.6□□□□□ -1.03
SCAMP3-208ENST00000490999 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
SCAMP3-208ENST00000490999 IGLC3P0DOY3 106 aa8.59□□□□□ -1.03
SCAMP3-208ENST00000490999 SPAG11AQ6PDA7 123 aa8.59□□□□□ -1.03
SCAMP3-208ENST00000490999 CBLN2Q8IUK8 224 aa8.59□□□□□ -1.03
SCAMP3-208ENST00000490999 Q8NBF4 154 aa8.59□□□□□ -1.03
SCAMP3-208ENST00000490999 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
SCAMP3-208ENST00000490999 NDUFA6P56556 154 aa8.58□□□□□ -1.04
SCAMP3-208ENST00000490999 CHCHD1Q96BP2 118 aaKnown RBP8.58□□□□□ -1.04
SCAMP3-208ENST00000490999 VPREB1P12018 145 aa8.57□□□□□ -1.04
SCAMP3-208ENST00000490999 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
SCAMP3-208ENST00000490999 SPRR4Q96PI1 79 aa8.57□□□□□ -1.04
SCAMP3-208ENST00000490999 IGLV5-39A0A0G2JS06 123 aa8.56□□□□□ -1.04
SCAMP3-208ENST00000490999 PFN2P35080 140 aa8.56□□□□□ -1.04
SCAMP3-208ENST00000490999 MT1HP80294 61 aa8.56□□□□□ -1.04
SCAMP3-208ENST00000490999 Q8NDZ9 215 aa8.56□□□□□ -1.04
SCAMP3-208ENST00000490999 PMCHL1Q16048 86 aa8.55□□□□□ -1.04
SCAMP3-208ENST00000490999 BAGE3Q86Y29 109 aa8.55□□□□□ -1.04
SCAMP3-208ENST00000490999 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
SCAMP3-208ENST00000490999 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
SCAMP3-208ENST00000490999 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
SCAMP3-208ENST00000490999 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
SCAMP3-208ENST00000490999 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
SCAMP3-208ENST00000490999 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
SCAMP3-208ENST00000490999 C11orf86A6NJI1 115 aa8.51□□□□□ -1.05
SCAMP3-208ENST00000490999 SLC7A5P1Q8MH63 180 aa8.51□□□□□ -1.05
SCAMP3-208ENST00000490999 IFI27L1Q96BM0 104 aa8.51□□□□□ -1.05
SCAMP3-208ENST00000490999 HSBP1O75506 76 aa8.5□□□□□ -1.05
SCAMP3-208ENST00000490999 TRGC2P03986 189 aa8.5□□□□□ -1.05
SCAMP3-208ENST00000490999 COX17Q14061 63 aa8.5□□□□□ -1.05
SCAMP3-208ENST00000490999 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
SCAMP3-208ENST00000490999 XP32Q5T750 250 aa8.49□□□□□ -1.05
SCAMP3-208ENST00000490999 NDUFA12Q9UI09 145 aa8.48□□□□□ -1.05
SCAMP3-208ENST00000490999 ERG28Q9UKR5 140 aa8.48□□□□□ -1.05
SCAMP3-208ENST00000490999 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
SCAMP3-208ENST00000490999 SPINK1P00995 79 aa8.47□□□□□ -1.05
SCAMP3-208ENST00000490999 CFC1BP0CG36 223 aa8.47□□□□□ -1.05
SCAMP3-208ENST00000490999 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
SCAMP3-208ENST00000490999 RPL24P83731 157 aaKnown RBP8.47□□□□□ -1.05
SCAMP3-208ENST00000490999 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
SCAMP3-208ENST00000490999 Q8N377 158 aa8.46□□□□□ -1.06
SCAMP3-208ENST00000490999 TMEM223A0PJW6 202 aa8.45□□□□□ -1.06
SCAMP3-208ENST00000490999 COLCA2A8K830 154 aa8.45□□□□□ -1.06
SCAMP3-208ENST00000490999 KRTAP10-6P60371 365 aaPredicted RBP8.45□□□□□ -1.06
SCAMP3-208ENST00000490999 MOBPQ13875 183 aa8.45□□□□□ -1.06
SCAMP3-208ENST00000490999 FAM19A2Q8N3H0 131 aa8.45□□□□□ -1.06
SCAMP3-208ENST00000490999 LEPROTL1O95214 131 aa8.44□□□□□ -1.06
SCAMP3-208ENST00000490999 IGLV9-49A0A0B4J1Y8 123 aa8.43□□□□□ -1.06
SCAMP3-208ENST00000490999 SERF1AO75920 110 aa8.43□□□□□ -1.06
SCAMP3-208ENST00000490999 HSPB8Q9UJY1 196 aa8.42□□□□□ -1.06
SCAMP3-208ENST00000490999 LINC00310P59036 64 aa8.41□□□□□ -1.06
SCAMP3-208ENST00000490999 PCOTHQ58A44 107 aa8.41□□□□□ -1.06
SCAMP3-208ENST00000490999 SMCR5Q8TEV8 140 aa8.41□□□□□ -1.06
SCAMP3-208ENST00000490999 IGLV8-61A0A075B6I0 122 aa8.4□□□□□ -1.06
SCAMP3-208ENST00000490999 LINC00587B1AMM8 73 aa8.4□□□□□ -1.06
SCAMP3-208ENST00000490999 HERV-K104P63124 156 aa8.4□□□□□ -1.06
SCAMP3-208ENST00000490999 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.06
SCAMP3-208ENST00000490999 PLNP26678 52 aa8.39□□□□□ -1.07
SCAMP3-208ENST00000490999 LINC00158P58513 81 aa8.39□□□□□ -1.07
SCAMP3-208ENST00000490999 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
SCAMP3-208ENST00000490999 USH2AO75445 5202 aa8.39□□□□□ -1.07
SCAMP3-208ENST00000490999 FLGP20930 4061 aaPredicted RBP8.39□□□□□ -1.07
SCAMP3-208ENST00000490999 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
SCAMP3-208ENST00000490999 NCR3O14931 201 aa8.38□□□□□ -1.07
SCAMP3-208ENST00000490999 SLC25A20O43772 301 aa8.38□□□□□ -1.07
SCAMP3-208ENST00000490999 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
SCAMP3-208ENST00000490999 KRTAP9-7A8MTY7 169 aa8.37□□□□□ -1.07
SCAMP3-208ENST00000490999 H0Y8G0 127 aa8.37□□□□□ -1.07
SCAMP3-208ENST00000490999 PRYO14603 147 aa8.37□□□□□ -1.07
SCAMP3-208ENST00000490999 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
SCAMP3-208ENST00000490999 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
SCAMP3-208ENST00000490999 SSPOA2VEC9 5147 aa8.37□□□□□ -1.07
SCAMP3-208ENST00000490999 M0R2T5 61 aa8.36□□□□□ -1.07
SCAMP3-208ENST00000490999 DPM2O94777 84 aa8.36□□□□□ -1.07
SCAMP3-208ENST00000490999 FABP4P15090 132 aa8.36□□□□□ -1.07
SCAMP3-208ENST00000490999 ETDCA0A1B0GVM5 59 aa8.35□□□□□ -1.07
SCAMP3-208ENST00000490999 LEPROTO15243 131 aa8.35□□□□□ -1.07
SCAMP3-208ENST00000490999 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
SCAMP3-208ENST00000490999 MAP1LC3CQ9BXW4 147 aa8.35□□□□□ -1.07
SCAMP3-208ENST00000490999 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.34□□□□□ -1.07
SCAMP3-208ENST00000490999 KRTAP4-16G5E9R7 235 aaPredicted RBP8.34□□□□□ -1.07
SCAMP3-208ENST00000490999 ERC2-IT1O76042 136 aa8.34□□□□□ -1.07
SCAMP3-208ENST00000490999 SMIM13P0DJ93 91 aa8.34□□□□□ -1.07
SCAMP3-208ENST00000490999 SPRR1AP35321 89 aa8.34□□□□□ -1.07
SCAMP3-208ENST00000490999 HERVK_113P61574 105 aa8.34□□□□□ -1.07
SCAMP3-208ENST00000490999 C9orf92A6NGG3 77 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms