RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 PRM2P04554 102 aa4.02□□□□□ -1.77
VPS41-214ENST00000490924 CCKP06307 115 aa4.02□□□□□ -1.77
VPS41-214ENST00000490924 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
VPS41-214ENST00000490924 TMEM258P61165 79 aa4.02□□□□□ -1.77
VPS41-214ENST00000490924 C6orf226Q5I0X4 101 aa4.02□□□□□ -1.77
VPS41-214ENST00000490924 GAGE2AQ6NT46 116 aa4.02□□□□□ -1.77
VPS41-214ENST00000490924 LINC01006Q8NI28 216 aa4.02□□□□□ -1.77
VPS41-214ENST00000490924 CR1P17927 2039 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 IGLV4-60A0A075B6I1 120 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 LOC110117498A0A087WWA1 95 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 A0A0J9YWU9 116 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 TRBV7-6A0A0J9YX20 115 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 IGHV4-30-4P0DP06 118 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 C9orf153Q5TBE3 101 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 SMIM20Q8N5G0 67 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 SERP2Q8N6R1 65 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 NRGNQ92686 78 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 C2orf48Q96LS8 159 aa4.01□□□□□ -1.77
VPS41-214ENST00000490924 A0A087WYN8 130 aa4□□□□□ -1.77
VPS41-214ENST00000490924 hADV29S1A0JD25 119 aa4□□□□□ -1.77
VPS41-214ENST00000490924 F8WDY8 70 aa4□□□□□ -1.77
VPS41-214ENST00000490924 LECT2O14960 151 aa4□□□□□ -1.77
VPS41-214ENST00000490924 HILS1P60008 231 aa4□□□□□ -1.77
VPS41-214ENST00000490924 KIAA0087Q14695 138 aa4□□□□□ -1.77
VPS41-214ENST00000490924 Q8N814 137 aa4□□□□□ -1.77
VPS41-214ENST00000490924 ZANQ9Y493 2812 aa4□□□□□ -1.77
VPS41-214ENST00000490924 VPS13CQ709C8 3753 aa4□□□□□ -1.77
VPS41-214ENST00000490924 A0A0U1RRA0 63 aa3.99□□□□□ -1.77
VPS41-214ENST00000490924 J3KT08 172 aa3.99□□□□□ -1.77
VPS41-214ENST00000490924 C9orf66Q5T8R8 295 aa3.99□□□□□ -1.77
VPS41-214ENST00000490924 MAPK1IP1LQ8NDC0 245 aa3.99□□□□□ -1.77
VPS41-214ENST00000490924 Q9HAA7 133 aa3.99□□□□□ -1.77
VPS41-214ENST00000490924 ESM1Q9NQ30 184 aa3.99□□□□□ -1.77
VPS41-214ENST00000490924 TOMM7Q9P0U1 55 aa3.99□□□□□ -1.77
VPS41-214ENST00000490924 NANOS2P60321 138 aaKnown RBP3.98□□□□□ -1.77
VPS41-214ENST00000490924 UBL5Q9BZL1 73 aa3.98□□□□□ -1.77
VPS41-214ENST00000490924 C14orf132Q9NPU4 83 aa3.98□□□□□ -1.77
VPS41-214ENST00000490924 LINC00846Q9NV44 126 aa3.98□□□□□ -1.77
VPS41-214ENST00000490924 TLN2Q9Y4G6 2542 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 FBN1P35555 2871 aaKnown RBP3.97□□□□□ -1.77
VPS41-214ENST00000490924 NBEAL1Q6ZS30 2694 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 A0A1B0GW54 56 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 USP17L23D6RBM5 183 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 H3BNG1 76 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 IGLV6-57P01721 117 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 MIFP14174 115 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 APOC4P55056 127 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 CXCL6P80162 114 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 LELP1Q5T871 98 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 LINC00575Q6W349 94 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 C6orf223Q8N319 242 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 OR13C6PQ8NH95 151 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 PRR34Q9NV39 138 aa3.97□□□□□ -1.77
VPS41-214ENST00000490924 MAP1AP78559 2803 aaPredicted RBP3.96□□□□□ -1.78
VPS41-214ENST00000490924 LOC107984640A0A0U1RRK4 108 aa3.96□□□□□ -1.78
VPS41-214ENST00000490924 RPL35AP18077 110 aaKnown RBP3.96□□□□□ -1.78
VPS41-214ENST00000490924 PFN2P35080 140 aa3.96□□□□□ -1.78
VPS41-214ENST00000490924 XCL1P47992 114 aa3.96□□□□□ -1.78
VPS41-214ENST00000490924 REG3AQ06141 175 aa3.96□□□□□ -1.78
VPS41-214ENST00000490924 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.96□□□□□ -1.78
VPS41-214ENST00000490924 CHCHD10Q8WYQ3 142 aaPredicted RBP3.96□□□□□ -1.78
VPS41-214ENST00000490924 UPK3BQ9BT76 320 aa3.96□□□□□ -1.78
VPS41-214ENST00000490924 RBM3P98179 157 aaKnown RBP3.95□□□□□ -1.78
VPS41-214ENST00000490924 Q6ZQT0 140 aa3.95□□□□□ -1.78
VPS41-214ENST00000490924 CCDC168Q8NDH2 2452 aa3.94□□□□□ -1.78
VPS41-214ENST00000490924 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
VPS41-214ENST00000490924 NCR3O14931 201 aa3.94□□□□□ -1.78
VPS41-214ENST00000490924 WFDC11Q8NEX6 87 aa3.94□□□□□ -1.78
VPS41-214ENST00000490924 ZNF469Q96JG9 3925 aaPredicted RBP3.93□□□□□ -1.78
VPS41-214ENST00000490924 NDUFC1O43677 76 aa3.93□□□□□ -1.78
VPS41-214ENST00000490924 ERC2-IT1O76042 136 aa3.93□□□□□ -1.78
VPS41-214ENST00000490924 DEFB130BP0DP73 79 aa3.93□□□□□ -1.78
VPS41-214ENST00000490924 DEFB130AP0DP74 79 aa3.93□□□□□ -1.78
VPS41-214ENST00000490924 SPAG11BQ08648 103 aa3.93□□□□□ -1.78
VPS41-214ENST00000490924 C6orf99Q4VX62 202 aa3.93□□□□□ -1.78
VPS41-214ENST00000490924 C9orf129Q5T035 196 aaKnown RBP3.93□□□□□ -1.78
VPS41-214ENST00000490924 LINC00269Q8N2A0 174 aa3.93□□□□□ -1.78
VPS41-214ENST00000490924 JMJD1CQ15652 2540 aa3.93□□□□□ -1.78
VPS41-214ENST00000490924 STAB1Q9NY15 2570 aa3.93□□□□□ -1.78
VPS41-214ENST00000490924 NOTCH3Q9UM47 2321 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 TRAV7A0A075B6U4 112 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 IGKV3OR2-268A0A0C4DH90 116 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 TRBV7-4A0A0J9YYF1 115 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 ANGP03950 147 aaKnown RBP3.92□□□□□ -1.78
VPS41-214ENST00000490924 SPART-AS1P0CW21 52 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 ATP5EP56381 51 aaPredicted RBP3.92□□□□□ -1.78
VPS41-214ENST00000490924 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
VPS41-214ENST00000490924 DAD1P61803 113 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 EGFEM1PQ0D2K5 195 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 KLKP1Q107X0 134 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 DSCR8Q96T75 97 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 WFDC10AQ9H1F0 79 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 CELA1Q9UNI1 258 aa3.92□□□□□ -1.78
VPS41-214ENST00000490924 WNK1Q9H4A3 2382 aa3.91□□□□□ -1.78
VPS41-214ENST00000490924 EPM2AB3EWF7 344 aa3.91□□□□□ -1.78
VPS41-214ENST00000490924 ELOF1P60002 83 aaKnown RBP3.91□□□□□ -1.78
VPS41-214ENST00000490924 Q8NAQ8 132 aa3.91□□□□□ -1.78
VPS41-214ENST00000490924 WFDC9Q8NEX5 89 aa3.91□□□□□ -1.78
VPS41-214ENST00000490924 DIRC1Q969H9 104 aa3.91□□□□□ -1.78
VPS41-214ENST00000490924 DPH3Q96FX2 82 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms