RNA–Protein interactions for RNA: ENST00000490812.5

PTPN18-215, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-215ENST00000490812 CRYGAP11844 174 aa12.62□□□□□ -0.39
PTPN18-215ENST00000490812 LINC00310P59036 64 aa12.62□□□□□ -0.39
PTPN18-215ENST00000490812 A0A087X002 238 aa12.6□□□□□ -0.39
PTPN18-215ENST00000490812 LPAP08519 4548 aa12.59□□□□□ -0.39
PTPN18-215ENST00000490812 H0Y8G0 127 aa12.59□□□□□ -0.39
PTPN18-215ENST00000490812 LINC00158P58513 81 aa12.59□□□□□ -0.39
PTPN18-215ENST00000490812 TMEM126AQ9H061 195 aa12.59□□□□□ -0.39
PTPN18-215ENST00000490812 LEPROTL1O95214 131 aa12.58□□□□□ -0.4
PTPN18-215ENST00000490812 Q8NDZ9 215 aa12.58□□□□□ -0.4
PTPN18-215ENST00000490812 FAM229BQ4G0N7 80 aa12.56□□□□□ -0.4
PTPN18-215ENST00000490812 TYMSOSQ8TAI1 123 aa12.56□□□□□ -0.4
PTPN18-215ENST00000490812 TMEM238C9JI98 176 aa12.55□□□□□ -0.4
PTPN18-215ENST00000490812 M0R378 163 aa12.55□□□□□ -0.4
PTPN18-215ENST00000490812 FAM19A1Q7Z5A9 133 aa12.55□□□□□ -0.4
PTPN18-215ENST00000490812 FABP4P15090 132 aa12.54□□□□□ -0.4
PTPN18-215ENST00000490812 HERV-K104P63124 156 aa12.54□□□□□ -0.4
PTPN18-215ENST00000490812 PRLHP81277 87 aa12.54□□□□□ -0.4
PTPN18-215ENST00000490812 HSPB8Q9UJY1 196 aa12.53□□□□□ -0.4
PTPN18-215ENST00000490812 A0A0U1RRA0 63 aa12.52□□□□□ -0.41
PTPN18-215ENST00000490812 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
PTPN18-215ENST00000490812 ATP6V1G1O75348 118 aa12.52□□□□□ -0.41
PTPN18-215ENST00000490812 PRR4Q16378 134 aa12.52□□□□□ -0.41
PTPN18-215ENST00000490812 ANAPC11Q9NYG5 84 aa12.52□□□□□ -0.41
PTPN18-215ENST00000490812 SMIM13P0DJ93 91 aa12.51□□□□□ -0.41
PTPN18-215ENST00000490812 MEIG1Q5JSS6 88 aa12.51□□□□□ -0.41
PTPN18-215ENST00000490812 KRTAP13-2Q52LG2 175 aa12.5□□□□□ -0.41
PTPN18-215ENST00000490812 MYMXA0A1B0GTQ4 84 aa12.49□□□□□ -0.41
PTPN18-215ENST00000490812 TSPAN13O95857 204 aa12.49□□□□□ -0.41
PTPN18-215ENST00000490812 NDUFA12Q9UI09 145 aa12.49□□□□□ -0.41
PTPN18-215ENST00000490812 PLNP26678 52 aa12.48□□□□□ -0.41
PTPN18-215ENST00000490812 MIR7-3HGQ8N6C7 128 aa12.48□□□□□ -0.41
PTPN18-215ENST00000490812 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
PTPN18-215ENST00000490812 BOD1L2Q8IYS8 172 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 PMCHL2Q9BQD1 86 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 MAP1LC3CQ9BXW4 147 aa12.47□□□□□ -0.41
PTPN18-215ENST00000490812 PLEKHB2Q96CS7 222 aa12.46□□□□□ -0.41
PTPN18-215ENST00000490812 IGKV2D-26A0A0A0MRZ7 120 aa12.45□□□□□ -0.42
PTPN18-215ENST00000490812 DPM2O94777 84 aa12.45□□□□□ -0.42
PTPN18-215ENST00000490812 PRYO14603 147 aa12.44□□□□□ -0.42
PTPN18-215ENST00000490812 LEPROTO15243 131 aa12.44□□□□□ -0.42
PTPN18-215ENST00000490812 LINC00304Q8N9R0 145 aa12.43□□□□□ -0.42
PTPN18-215ENST00000490812 HIGD2AQ9BW72 106 aa12.43□□□□□ -0.42
PTPN18-215ENST00000490812 IGKCP01834 107 aa12.42□□□□□ -0.42
PTPN18-215ENST00000490812 TSPEAR-AS2P59090 65 aa12.42□□□□□ -0.42
PTPN18-215ENST00000490812 NCR3O14931 201 aa12.41□□□□□ -0.42
PTPN18-215ENST00000490812 HERVK_113P61574 105 aa12.41□□□□□ -0.42
PTPN18-215ENST00000490812 CTAG1AP78358 180 aa12.41□□□□□ -0.42
PTPN18-215ENST00000490812 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
PTPN18-215ENST00000490812 KCNQ1DNQ9H478 68 aa12.41□□□□□ -0.42
PTPN18-215ENST00000490812 SPRR1AP35321 89 aa12.4□□□□□ -0.42
PTPN18-215ENST00000490812 NMUP48645 174 aa12.4□□□□□ -0.42
PTPN18-215ENST00000490812 LOC107984156A0A0G2JMH3 177 aa12.39□□□□□ -0.43
PTPN18-215ENST00000490812 J3QQQ9 107 aa12.39□□□□□ -0.43
PTPN18-215ENST00000490812 ARL17AQ8IVW1 177 aa12.39□□□□□ -0.43
PTPN18-215ENST00000490812 ZNF706Q9Y5V0 76 aaPredicted RBP12.39□□□□□ -0.43
PTPN18-215ENST00000490812 SPRR4Q96PI1 79 aa12.38□□□□□ -0.43
PTPN18-215ENST00000490812 TRBV10-3A0A0K0K1G6 114 aa12.36□□□□□ -0.43
PTPN18-215ENST00000490812 KRTAP4-16G5E9R7 235 aaPredicted RBP12.36□□□□□ -0.43
PTPN18-215ENST00000490812 LGALS3P17931 250 aaKnown RBP12.36□□□□□ -0.43
PTPN18-215ENST00000490812 S100A12P80511 92 aa12.36□□□□□ -0.43
PTPN18-215ENST00000490812 SYS1-DBNDD2H3BUS1 97 aa12.35□□□□□ -0.43
PTPN18-215ENST00000490812 DAND5Q8N907 189 aa12.35□□□□□ -0.43
PTPN18-215ENST00000490812 TRBV10-2A0A0K0K1G8 114 aa12.34□□□□□ -0.43
PTPN18-215ENST00000490812 ETDCA0A1B0GVM5 59 aa12.34□□□□□ -0.43
PTPN18-215ENST00000490812 C3orf22Q8N5N4 141 aa12.33□□□□□ -0.44
PTPN18-215ENST00000490812 MIEN1Q9BRT3 115 aa12.32□□□□□ -0.44
PTPN18-215ENST00000490812 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
PTPN18-215ENST00000490812 NDUFC2O95298 119 aa12.3□□□□□ -0.44
PTPN18-215ENST00000490812 DDTP30046 118 aa12.3□□□□□ -0.44
PTPN18-215ENST00000490812 SPAG11AQ6PDA7 123 aa12.3□□□□□ -0.44
PTPN18-215ENST00000490812 SMCR5Q8TEV8 140 aa12.3□□□□□ -0.44
PTPN18-215ENST00000490812 E9PLD3 99 aa12.29□□□□□ -0.44
PTPN18-215ENST00000490812 COA6Q5JTJ3 125 aaKnown RBP12.29□□□□□ -0.44
PTPN18-215ENST00000490812 LINC01545Q5VT33 79 aa12.29□□□□□ -0.44
PTPN18-215ENST00000490812 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
PTPN18-215ENST00000490812 RETNLBQ9BQ08 111 aa12.29□□□□□ -0.44
PTPN18-215ENST00000490812 B5MCH6 92 aa12.27□□□□□ -0.45
PTPN18-215ENST00000490812 C3orf79P0CE67 100 aa12.26□□□□□ -0.45
PTPN18-215ENST00000490812 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
PTPN18-215ENST00000490812 IGLV6-57P01721 117 aa12.25□□□□□ -0.45
PTPN18-215ENST00000490812 KRTDAPP60985 99 aa12.25□□□□□ -0.45
PTPN18-215ENST00000490812 LINC00483Q53H64 154 aa12.25□□□□□ -0.45
PTPN18-215ENST00000490812 S100A7L2Q5SY68 101 aa12.24□□□□□ -0.45
PTPN18-215ENST00000490812 MUC2Q02817 5179 aa12.23□□□□□ -0.45
PTPN18-215ENST00000490812 C4orf48Q5BLP8 95 aa12.23□□□□□ -0.45
PTPN18-215ENST00000490812 TPRXLQ17RH7 258 aa12.22□□□□□ -0.45
PTPN18-215ENST00000490812 ADAMTSL4-AS1Q5T5F5 129 aa12.22□□□□□ -0.45
PTPN18-215ENST00000490812 SOSTDC1Q6X4U4 206 aa12.22□□□□□ -0.45
PTPN18-215ENST00000490812 Q6ZRX8 168 aa12.22□□□□□ -0.45
PTPN18-215ENST00000490812 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms