RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PSCAO43653 123 aa4.95□□□□□ -1.62
CLDN1-202ENST00000490800 APOMO95445 188 aa4.95□□□□□ -1.62
CLDN1-202ENST00000490800 SMR3BP02814 79 aaPredicted RBP4.95□□□□□ -1.62
CLDN1-202ENST00000490800 HSD52Q0P140 79 aa4.95□□□□□ -1.62
CLDN1-202ENST00000490800 C15orf56Q8N910 161 aa4.95□□□□□ -1.62
CLDN1-202ENST00000490800 RMI2Q96E14 147 aa4.95□□□□□ -1.62
CLDN1-202ENST00000490800 LITAFQ99732 161 aa4.95□□□□□ -1.62
CLDN1-202ENST00000490800 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
CLDN1-202ENST00000490800 PRSS2P07478 247 aa4.94□□□□□ -1.62
CLDN1-202ENST00000490800 INAFM2P0DMQ5 153 aa4.94□□□□□ -1.62
CLDN1-202ENST00000490800 HINT1P49773 126 aaPredicted RBP4.94□□□□□ -1.62
CLDN1-202ENST00000490800 HERV-K104P63124 156 aa4.94□□□□□ -1.62
CLDN1-202ENST00000490800 SPAG11BQ08648 103 aa4.94□□□□□ -1.62
CLDN1-202ENST00000490800 C6orf226Q5I0X4 101 aa4.94□□□□□ -1.62
CLDN1-202ENST00000490800 CFAP161Q6P656 301 aa4.94□□□□□ -1.62
CLDN1-202ENST00000490800 SNHG12Q9BXW3 62 aa4.94□□□□□ -1.62
CLDN1-202ENST00000490800 SPANXB1Q9NS25 103 aaPredicted RBP4.94□□□□□ -1.62
CLDN1-202ENST00000490800 IGLV5-52A0A0A0MRZ9 124 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 GAGE10A6NGK3 116 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 M0R143 59 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 TIMM17BO60830 172 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 CXCL5P42830 114 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 HAMPP81172 84 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 TAL2Q16559 108 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 BVES-AS1Q5T3Y7 98 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 ADAMTSL4-AS1Q5T5F5 129 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 Q5VSD8 79 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 C2orf82Q6UX34 121 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 LINC00526Q96FQ7 95 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 HIST1H4GQ99525 98 aa4.93□□□□□ -1.62
CLDN1-202ENST00000490800 GVQW2A0A096LPI5 108 aaPredicted RBP4.92□□□□□ -1.62
CLDN1-202ENST00000490800 TMEM238C9JI98 176 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 SMIM13P0DJ93 91 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 CKS1BP61024 79 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 HIGD2BQ4VC39 106 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 C10orf25Q5T742 122 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 SFTA2Q6UW10 78 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 UNQ6190/PRO20217Q6UXQ8 127 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 CEND1Q8N111 149 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 Q8N814 137 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 NTN5Q8WTR8 489 aaPredicted RBP4.92□□□□□ -1.62
CLDN1-202ENST00000490800 SPANXDQ9BXN6 97 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 SPANXCQ9NY87 97 aa4.92□□□□□ -1.62
CLDN1-202ENST00000490800 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
CLDN1-202ENST00000490800 FXYD2P54710 66 aa4.91□□□□□ -1.62
CLDN1-202ENST00000490800 SRSF9Q13242 221 aaKnown RBP eCLIP4.91□□□□□ -1.62
CLDN1-202ENST00000490800 BATFQ16520 125 aa4.91□□□□□ -1.62
CLDN1-202ENST00000490800 MEIG1Q5JSS6 88 aa4.91□□□□□ -1.62
CLDN1-202ENST00000490800 C2orf48Q96LS8 159 aa4.91□□□□□ -1.62
CLDN1-202ENST00000490800 A0A0U1RRA0 63 aa4.9□□□□□ -1.63
CLDN1-202ENST00000490800 LECT2O14960 151 aa4.9□□□□□ -1.63
CLDN1-202ENST00000490800 CIRBPQ14011 172 aaKnown RBP4.9□□□□□ -1.63
CLDN1-202ENST00000490800 WFDC2Q14508 124 aa4.9□□□□□ -1.63
CLDN1-202ENST00000490800 Q6ZVH6 145 aa4.9□□□□□ -1.63
CLDN1-202ENST00000490800 MUSTN1Q8IVN3 82 aa4.9□□□□□ -1.63
CLDN1-202ENST00000490800 DAND5Q8N907 189 aa4.9□□□□□ -1.63
CLDN1-202ENST00000490800 ERG28Q9UKR5 140 aa4.9□□□□□ -1.63
CLDN1-202ENST00000490800 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
CLDN1-202ENST00000490800 F8WDY8 70 aa4.89□□□□□ -1.63
CLDN1-202ENST00000490800 PFN2P35080 140 aa4.89□□□□□ -1.63
CLDN1-202ENST00000490800 LINC00158P58513 81 aa4.89□□□□□ -1.63
CLDN1-202ENST00000490800 C9orf116Q5BN46 136 aaPredicted RBP4.89□□□□□ -1.63
CLDN1-202ENST00000490800 SERTAD4-AS1Q5TG53 156 aa4.89□□□□□ -1.63
CLDN1-202ENST00000490800 CAMK2N2Q96S95 79 aa4.89□□□□□ -1.63
CLDN1-202ENST00000490800 C6orf48Q9UBA6 75 aa4.89□□□□□ -1.63
CLDN1-202ENST00000490800 VPS13BQ7Z7G8 4022 aa4.89□□□□□ -1.63
CLDN1-202ENST00000490800 SRRM2Q9UQ35 2752 aaKnown RBP4.88□□□□□ -1.63
CLDN1-202ENST00000490800 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.88□□□□□ -1.63
CLDN1-202ENST00000490800 TRBV30A0A0K0K1B3 111 aa4.88□□□□□ -1.63
CLDN1-202ENST00000490800 IFITM1P13164 125 aa4.88□□□□□ -1.63
CLDN1-202ENST00000490800 NPC2P61916 151 aa4.88□□□□□ -1.63
CLDN1-202ENST00000490800 SYCNQ0VAF6 134 aa4.88□□□□□ -1.63
CLDN1-202ENST00000490800 SOSTDC1Q6X4U4 206 aa4.88□□□□□ -1.63
CLDN1-202ENST00000490800 Q6ZRU5 148 aa4.88□□□□□ -1.63
CLDN1-202ENST00000490800 MIR7-3HGQ8N6C7 128 aa4.88□□□□□ -1.63
CLDN1-202ENST00000490800 LINC00308Q8TCZ7 52 aa4.88□□□□□ -1.63
CLDN1-202ENST00000490800 A4D1N5 150 aa4.87□□□□□ -1.63
CLDN1-202ENST00000490800 A6NDN8 102 aa4.87□□□□□ -1.63
CLDN1-202ENST00000490800 RPL24P83731 157 aaKnown RBP4.87□□□□□ -1.63
CLDN1-202ENST00000490800 COX17Q14061 63 aa4.87□□□□□ -1.63
CLDN1-202ENST00000490800 LINC01620Q4KN68 170 aa4.87□□□□□ -1.63
CLDN1-202ENST00000490800 COL5A1-AS1Q5SY13 56 aa4.87□□□□□ -1.63
CLDN1-202ENST00000490800 A0A1B0GWB2 263 aa4.86□□□□□ -1.63
CLDN1-202ENST00000490800 K7ERJ3 54 aa4.86□□□□□ -1.63
CLDN1-202ENST00000490800 CARD19Q96LW7 228 aa4.86□□□□□ -1.63
CLDN1-202ENST00000490800 PPDPFQ9H3Y8 114 aa4.86□□□□□ -1.63
CLDN1-202ENST00000490800 NHP2Q9NX24 153 aaKnown RBP4.86□□□□□ -1.63
CLDN1-202ENST00000490800 LOC107984156A0A0G2JMH3 177 aa4.85□□□□□ -1.63
CLDN1-202ENST00000490800 TAX1BP3O14907 124 aa4.85□□□□□ -1.63
CLDN1-202ENST00000490800 CFC1BP0CG36 223 aa4.85□□□□□ -1.63
CLDN1-202ENST00000490800 CFC1P0CG37 223 aa4.85□□□□□ -1.63
CLDN1-202ENST00000490800 C14orf177Q52M58 125 aa4.85□□□□□ -1.63
CLDN1-202ENST00000490800 LBHQ53QV2 105 aaPredicted RBP4.85□□□□□ -1.63
CLDN1-202ENST00000490800 ARL17AQ8IVW1 177 aa4.85□□□□□ -1.63
CLDN1-202ENST00000490800 COPS9Q8WXC6 57 aa4.85□□□□□ -1.63
CLDN1-202ENST00000490800 SND1-IT1Q9HBX3 110 aa4.85□□□□□ -1.63
CLDN1-202ENST00000490800 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.84□□□□□ -1.63
CLDN1-202ENST00000490800 CNBPP62633 177 aaKnown RBP4.84□□□□□ -1.63
CLDN1-202ENST00000490800 Q6ZSA8 131 aa4.84□□□□□ -1.63
CLDN1-202ENST00000490800 FLG2Q5D862 2391 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms