RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 COX19Q49B96 90 aa8.84□□□□□ -0.99
COL2A1-207ENST00000490609 SLC7A5P1Q8MH63 180 aa8.84□□□□□ -0.99
COL2A1-207ENST00000490609 ERG28Q9UKR5 140 aa8.84□□□□□ -0.99
COL2A1-207ENST00000490609 LINC01549A6NIU2 74 aa8.83□□□□□ -1
COL2A1-207ENST00000490609 ZNF625Q96I27 306 aaPredicted RBP8.83□□□□□ -1
COL2A1-207ENST00000490609 H3BRM9 83 aa8.82□□□□□ -1
COL2A1-207ENST00000490609 COX17Q14061 63 aa8.81□□□□□ -1
COL2A1-207ENST00000490609 CBLN2Q8IUK8 224 aa8.81□□□□□ -1
COL2A1-207ENST00000490609 SPRR4Q96PI1 79 aa8.81□□□□□ -1
COL2A1-207ENST00000490609 C11orf86A6NJI1 115 aa8.79□□□□□ -1
COL2A1-207ENST00000490609 KRTAP13-3Q3SY46 172 aa8.79□□□□□ -1
COL2A1-207ENST00000490609 FA2HQ7L5A8 372 aa8.79□□□□□ -1
COL2A1-207ENST00000490609 RPL24P83731 157 aaKnown RBP8.78□□□□□ -1
COL2A1-207ENST00000490609 FABP9Q0Z7S8 132 aa8.77□□□□□ -1.01
COL2A1-207ENST00000490609 PMCHL1Q16048 86 aa8.77□□□□□ -1.01
COL2A1-207ENST00000490609 HIGD2AQ9BW72 106 aa8.77□□□□□ -1.01
COL2A1-207ENST00000490609 KRTAP4-16G5E9R7 235 aaPredicted RBP8.76□□□□□ -1.01
COL2A1-207ENST00000490609 NDUFA6P56556 154 aa8.76□□□□□ -1.01
COL2A1-207ENST00000490609 DAND5Q8N907 189 aa8.76□□□□□ -1.01
COL2A1-207ENST00000490609 ASB16-AS1Q495Z4 193 aa8.75□□□□□ -1.01
COL2A1-207ENST00000490609 SPAG11AQ6PDA7 123 aa8.75□□□□□ -1.01
COL2A1-207ENST00000490609 C18orf32Q8TCD1 76 aa8.75□□□□□ -1.01
COL2A1-207ENST00000490609 SMCO4Q9NRQ5 59 aa8.75□□□□□ -1.01
COL2A1-207ENST00000490609 SPRR1AP35321 89 aa8.74□□□□□ -1.01
COL2A1-207ENST00000490609 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
COL2A1-207ENST00000490609 TRAPPC1Q9Y5R8 145 aa8.74□□□□□ -1.01
COL2A1-207ENST00000490609 FSIP2Q5CZC0 6907 aa8.74□□□□□ -1.01
COL2A1-207ENST00000490609 LINC00614P0C842 121 aa8.73□□□□□ -1.01
COL2A1-207ENST00000490609 Q8NBF4 154 aa8.73□□□□□ -1.01
COL2A1-207ENST00000490609 A0A0U1RRA0 63 aa8.72□□□□□ -1.01
COL2A1-207ENST00000490609 BAGE3Q86Y29 109 aa8.72□□□□□ -1.01
COL2A1-207ENST00000490609 YPEL4Q96NS1 127 aa8.72□□□□□ -1.01
COL2A1-207ENST00000490609 HBDP02042 147 aa8.71□□□□□ -1.02
COL2A1-207ENST00000490609 LINC00158P58513 81 aa8.71□□□□□ -1.02
COL2A1-207ENST00000490609 TMEM170BQ5T4T1 132 aa8.71□□□□□ -1.02
COL2A1-207ENST00000490609 SMCR5Q8TEV8 140 aa8.71□□□□□ -1.02
COL2A1-207ENST00000490609 TMEM223A0PJW6 202 aa8.7□□□□□ -1.02
COL2A1-207ENST00000490609 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
COL2A1-207ENST00000490609 KCNQ1DNQ9H478 68 aa8.7□□□□□ -1.02
COL2A1-207ENST00000490609 SMIM13P0DJ93 91 aa8.69□□□□□ -1.02
COL2A1-207ENST00000490609 LINC00483Q53H64 154 aa8.69□□□□□ -1.02
COL2A1-207ENST00000490609 LINC00337Q8N6G1 96 aa8.69□□□□□ -1.02
COL2A1-207ENST00000490609 PRYO14603 147 aa8.68□□□□□ -1.02
COL2A1-207ENST00000490609 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
COL2A1-207ENST00000490609 ERC2-IT1O76042 136 aa8.67□□□□□ -1.02
COL2A1-207ENST00000490609 SFTA2Q6UW10 78 aa8.67□□□□□ -1.02
COL2A1-207ENST00000490609 NCR3O14931 201 aa8.66□□□□□ -1.02
COL2A1-207ENST00000490609 CHTOPQ9Y3Y2 248 aaKnown RBP8.66□□□□□ -1.02
COL2A1-207ENST00000490609 TRBV10-3A0A0K0K1G6 114 aa8.65□□□□□ -1.02
COL2A1-207ENST00000490609 SPINK1P00995 79 aa8.65□□□□□ -1.02
COL2A1-207ENST00000490609 C4orf48Q5BLP8 95 aa8.65□□□□□ -1.02
COL2A1-207ENST00000490609 BOD1L2Q8IYS8 172 aa8.65□□□□□ -1.02
COL2A1-207ENST00000490609 Q8N377 158 aa8.65□□□□□ -1.02
COL2A1-207ENST00000490609 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
COL2A1-207ENST00000490609 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
COL2A1-207ENST00000490609 MIR7-3HGQ8N6C7 128 aa8.64□□□□□ -1.03
COL2A1-207ENST00000490609 B5MCH6 92 aa8.63□□□□□ -1.03
COL2A1-207ENST00000490609 Q9BRP9 147 aa8.63□□□□□ -1.03
COL2A1-207ENST00000490609 TRAV12-1A0A0B4J245 112 aa8.62□□□□□ -1.03
COL2A1-207ENST00000490609 ATP6V1G1O75348 118 aa8.61□□□□□ -1.03
COL2A1-207ENST00000490609 GAGE2AQ6NT46 116 aa8.61□□□□□ -1.03
COL2A1-207ENST00000490609 LOC107984156A0A0G2JMH3 177 aa8.6□□□□□ -1.03
COL2A1-207ENST00000490609 S100A1P23297 94 aa8.6□□□□□ -1.03
COL2A1-207ENST00000490609 LINC01547P58512 204 aaPredicted RBP8.6□□□□□ -1.03
COL2A1-207ENST00000490609 TSPEAR-AS2P59090 65 aa8.6□□□□□ -1.03
COL2A1-207ENST00000490609 MOBPQ13875 183 aa8.6□□□□□ -1.03
COL2A1-207ENST00000490609 XP32Q5T750 250 aa8.6□□□□□ -1.03
COL2A1-207ENST00000490609 ARL17AQ8IVW1 177 aa8.6□□□□□ -1.03
COL2A1-207ENST00000490609 ETDCA0A1B0GVM5 59 aa8.59□□□□□ -1.03
COL2A1-207ENST00000490609 COLCA2A8K830 154 aa8.59□□□□□ -1.03
COL2A1-207ENST00000490609 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.03
COL2A1-207ENST00000490609 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
COL2A1-207ENST00000490609 IFI27L1Q96BM0 104 aa8.59□□□□□ -1.03
COL2A1-207ENST00000490609 CHCHD1Q96BP2 118 aaKnown RBP8.59□□□□□ -1.03
COL2A1-207ENST00000490609 IGLV9-49A0A0B4J1Y8 123 aa8.58□□□□□ -1.04
COL2A1-207ENST00000490609 TRGC2P03986 189 aa8.58□□□□□ -1.04
COL2A1-207ENST00000490609 MEIG1Q5JSS6 88 aa8.58□□□□□ -1.04
COL2A1-207ENST00000490609 SSBP3-AS1Q7Z2R9 100 aa8.58□□□□□ -1.04
COL2A1-207ENST00000490609 CRCT1Q9UGL9 99 aa8.57□□□□□ -1.04
COL2A1-207ENST00000490609 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
COL2A1-207ENST00000490609 HERV-K104P63124 156 aa8.56□□□□□ -1.04
COL2A1-207ENST00000490609 EIF4EBP3O60516 100 aaPredicted RBP8.54□□□□□ -1.04
COL2A1-207ENST00000490609 Q6ZRX8 168 aa8.54□□□□□ -1.04
COL2A1-207ENST00000490609 FAM19A2Q8N3H0 131 aa8.54□□□□□ -1.04
COL2A1-207ENST00000490609 TRBV10-2A0A0K0K1G8 114 aa8.53□□□□□ -1.04
COL2A1-207ENST00000490609 SLC25A20O43772 301 aa8.53□□□□□ -1.04
COL2A1-207ENST00000490609 HSBP1O75506 76 aa8.53□□□□□ -1.04
COL2A1-207ENST00000490609 DDTP30046 118 aa8.53□□□□□ -1.04
COL2A1-207ENST00000490609 FLGP20930 4061 aaPredicted RBP8.53□□□□□ -1.04
COL2A1-207ENST00000490609 MYMXA0A1B0GTQ4 84 aa8.52□□□□□ -1.05
COL2A1-207ENST00000490609 IGLV6-57P01721 117 aa8.52□□□□□ -1.05
COL2A1-207ENST00000490609 LINC00310P59036 64 aa8.51□□□□□ -1.05
COL2A1-207ENST00000490609 MT1HP80294 61 aa8.51□□□□□ -1.05
COL2A1-207ENST00000490609 ST20-AS1Q8NBB2 130 aa8.51□□□□□ -1.05
COL2A1-207ENST00000490609 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
COL2A1-207ENST00000490609 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
COL2A1-207ENST00000490609 LEPROTO15243 131 aa8.49□□□□□ -1.05
COL2A1-207ENST00000490609 SERF1AO75920 110 aa8.49□□□□□ -1.05
COL2A1-207ENST00000490609 MAP1LC3CQ9BXW4 147 aa8.48□□□□□ -1.05
COL2A1-207ENST00000490609 HIST1H2BKO60814 126 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms