RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 GVQW2A0A096LPI5 108 aaPredicted RBP6.57□□□□□ -1.36
TTC28-207ENST00000490475 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
TTC28-207ENST00000490475 PANO1I0J062 215 aa6.57□□□□□ -1.36
TTC28-207ENST00000490475 COX7A2LO14548 114 aa6.57□□□□□ -1.36
TTC28-207ENST00000490475 MALP21145 153 aa6.57□□□□□ -1.36
TTC28-207ENST00000490475 PMVKQ15126 192 aa6.57□□□□□ -1.36
TTC28-207ENST00000490475 RAB37Q96AX2 223 aa6.57□□□□□ -1.36
TTC28-207ENST00000490475 TRBV20-1A0A075B6N2 111 aa6.56□□□□□ -1.36
TTC28-207ENST00000490475 C11orf86A6NJI1 115 aa6.56□□□□□ -1.36
TTC28-207ENST00000490475 COX6A2Q02221 97 aa6.56□□□□□ -1.36
TTC28-207ENST00000490475 IGHV3OR16-9A0A0B4J2B5 98 aa6.55□□□□□ -1.36
TTC28-207ENST00000490475 ZNF561-AS1K7EIQ3 104 aa6.55□□□□□ -1.36
TTC28-207ENST00000490475 M0QXV9 152 aa6.55□□□□□ -1.36
TTC28-207ENST00000490475 UBE2D1P51668 147 aa6.55□□□□□ -1.36
TTC28-207ENST00000490475 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
TTC28-207ENST00000490475 AMELXQ99217 191 aa6.55□□□□□ -1.36
TTC28-207ENST00000490475 IGLV4-69A0A075B6H9 119 aa6.54□□□□□ -1.36
TTC28-207ENST00000490475 H3BMG7 143 aa6.54□□□□□ -1.36
TTC28-207ENST00000490475 CHTF8P0CG12 524 aa6.54□□□□□ -1.36
TTC28-207ENST00000490475 LRP1Q07954 4544 aaKnown RBP6.54□□□□□ -1.36
TTC28-207ENST00000490475 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
TTC28-207ENST00000490475 ZNF815PA8K554 130 aa6.53□□□□□ -1.36
TTC28-207ENST00000490475 RPL24P83731 157 aaKnown RBP6.53□□□□□ -1.36
TTC28-207ENST00000490475 SIGMAR1Q99720 223 aa6.53□□□□□ -1.36
TTC28-207ENST00000490475 APOMO95445 188 aa6.52□□□□□ -1.37
TTC28-207ENST00000490475 SYCNQ0VAF6 134 aa6.52□□□□□ -1.37
TTC28-207ENST00000490475 SRSF9Q13242 221 aaKnown RBP eCLIP6.52□□□□□ -1.37
TTC28-207ENST00000490475 SCGB1D4Q6XE38 83 aa6.52□□□□□ -1.37
TTC28-207ENST00000490475 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
TTC28-207ENST00000490475 PRO0461Q9UI25 63 aa6.52□□□□□ -1.37
TTC28-207ENST00000490475 A0A087WZ39 114 aa6.51□□□□□ -1.37
TTC28-207ENST00000490475 A0A0J9YXV3 536 aa6.51□□□□□ -1.37
TTC28-207ENST00000490475 K7ERJ3 54 aa6.51□□□□□ -1.37
TTC28-207ENST00000490475 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
TTC28-207ENST00000490475 PRR3P79522 188 aaKnown RBP6.51□□□□□ -1.37
TTC28-207ENST00000490475 REG3GQ6UW15 175 aa6.51□□□□□ -1.37
TTC28-207ENST00000490475 PLEKHB2Q96CS7 222 aa6.51□□□□□ -1.37
TTC28-207ENST00000490475 LINC01600Q96MT4 127 aa6.51□□□□□ -1.37
TTC28-207ENST00000490475 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
TTC28-207ENST00000490475 LEPROTO15243 131 aa6.5□□□□□ -1.37
TTC28-207ENST00000490475 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
TTC28-207ENST00000490475 SPINK6Q6UWN8 80 aa6.5□□□□□ -1.37
TTC28-207ENST00000490475 Q6ZRP5 223 aa6.5□□□□□ -1.37
TTC28-207ENST00000490475 FAM19A3Q7Z5A8 133 aa6.5□□□□□ -1.37
TTC28-207ENST00000490475 C2orf48Q96LS8 159 aa6.5□□□□□ -1.37
TTC28-207ENST00000490475 CAMK2N2Q96S95 79 aa6.5□□□□□ -1.37
TTC28-207ENST00000490475 A0A096LNI7 61 aa6.49□□□□□ -1.37
TTC28-207ENST00000490475 A0A0B4J2C4 111 aa6.49□□□□□ -1.37
TTC28-207ENST00000490475 LOC107984640A0A0U1RRK4 108 aa6.49□□□□□ -1.37
TTC28-207ENST00000490475 KIAA0087Q14695 138 aa6.49□□□□□ -1.37
TTC28-207ENST00000490475 NAA38Q9BRA0 125 aaKnown RBP6.49□□□□□ -1.37
TTC28-207ENST00000490475 CDKN2A-AS1Q9UH64 79 aa6.49□□□□□ -1.37
TTC28-207ENST00000490475 FAT3Q8TDW7 4589 aa6.48□□□□□ -1.37
TTC28-207ENST00000490475 F8WDY8 70 aa6.48□□□□□ -1.37
TTC28-207ENST00000490475 J3QQQ9 107 aa6.48□□□□□ -1.37
TTC28-207ENST00000490475 LGALS3P17931 250 aaKnown RBP6.48□□□□□ -1.37
TTC28-207ENST00000490475 C10orf25Q5T742 122 aa6.48□□□□□ -1.37
TTC28-207ENST00000490475 UNQ6190/PRO20217Q6UXQ8 127 aa6.48□□□□□ -1.37
TTC28-207ENST00000490475 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
TTC28-207ENST00000490475 PRO1854Q9UHT4 67 aa6.48□□□□□ -1.37
TTC28-207ENST00000490475 HMCN2Q8NDA2 5059 aa6.47□□□□□ -1.37
TTC28-207ENST00000490475 TINCRA0A1B0GVN0 87 aa6.47□□□□□ -1.37
TTC28-207ENST00000490475 TMEM223A0PJW6 202 aa6.47□□□□□ -1.37
TTC28-207ENST00000490475 TSPAN13O95857 204 aa6.47□□□□□ -1.37
TTC28-207ENST00000490475 CKS1BP61024 79 aa6.47□□□□□ -1.37
TTC28-207ENST00000490475 HERVK_113P63121 156 aa6.47□□□□□ -1.37
TTC28-207ENST00000490475 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
TTC28-207ENST00000490475 PKHD1L1Q86WI1 4243 aa6.46□□□□□ -1.38
TTC28-207ENST00000490475 GAGE2BQ13066 116 aa6.46□□□□□ -1.38
TTC28-207ENST00000490475 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
TTC28-207ENST00000490475 TEN1Q86WV5 123 aa6.46□□□□□ -1.38
TTC28-207ENST00000490475 LINC01561Q8N1V8 128 aa6.46□□□□□ -1.38
TTC28-207ENST00000490475 PPDPFLQ8WWR9 84 aa6.46□□□□□ -1.38
TTC28-207ENST00000490475 TOMM7Q9P0U1 55 aa6.46□□□□□ -1.38
TTC28-207ENST00000490475 NDUFA1O15239 70 aa6.45□□□□□ -1.38
TTC28-207ENST00000490475 TIMM17BO60830 172 aa6.45□□□□□ -1.38
TTC28-207ENST00000490475 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
TTC28-207ENST00000490475 TMEM170BQ5T4T1 132 aa6.45□□□□□ -1.38
TTC28-207ENST00000490475 PPDPFQ9H3Y8 114 aa6.45□□□□□ -1.38
TTC28-207ENST00000490475 C6orf48Q9UBA6 75 aa6.45□□□□□ -1.38
TTC28-207ENST00000490475 IGLV5-45A0A087WSX0 123 aa6.44□□□□□ -1.38
TTC28-207ENST00000490475 A0A0J9YXY3 114 aa6.44□□□□□ -1.38
TTC28-207ENST00000490475 SMIM1B2RUZ4 78 aa6.43□□□□□ -1.38
TTC28-207ENST00000490475 PRSS2P07478 247 aa6.43□□□□□ -1.38
TTC28-207ENST00000490475 SPINK8P0C7L1 97 aa6.43□□□□□ -1.38
TTC28-207ENST00000490475 CFC1BP0CG36 223 aa6.43□□□□□ -1.38
TTC28-207ENST00000490475 CFC1P0CG37 223 aa6.43□□□□□ -1.38
TTC28-207ENST00000490475 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
TTC28-207ENST00000490475 C9orf116Q5BN46 136 aaPredicted RBP6.43□□□□□ -1.38
TTC28-207ENST00000490475 COPS9Q8WXC6 57 aa6.43□□□□□ -1.38
TTC28-207ENST00000490475 LOC107984156A0A0G2JMH3 177 aa6.42□□□□□ -1.38
TTC28-207ENST00000490475 TRBV30A0A0K0K1B3 111 aa6.42□□□□□ -1.38
TTC28-207ENST00000490475 IFITM1P13164 125 aa6.42□□□□□ -1.38
TTC28-207ENST00000490475 ZNF22P17026 224 aaPredicted RBP6.42□□□□□ -1.38
TTC28-207ENST00000490475 ARL17AQ8IVW1 177 aa6.42□□□□□ -1.38
TTC28-207ENST00000490475 Q8IZM0 81 aa6.42□□□□□ -1.38
TTC28-207ENST00000490475 SPANXDQ9BXN6 97 aa6.42□□□□□ -1.38
TTC28-207ENST00000490475 SPANXCQ9NY87 97 aa6.42□□□□□ -1.38
TTC28-207ENST00000490475 ERG28Q9UKR5 140 aa6.42□□□□□ -1.38
TTC28-207ENST00000490475 A0A1W2PNN7 141 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms