RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 COX7B2Q8TF08 81 aa2.97□□□□□ -1.93
RBM39-235ENST00000490354 ZNF625Q96I27 306 aaPredicted RBP2.97□□□□□ -1.93
RBM39-235ENST00000490354 DNAH17Q9UFH2 4485 aa2.97□□□□□ -1.93
RBM39-235ENST00000490354 DNAH10Q8IVF4 4471 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 IGKV2D-24A0A075B6R9 120 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 A0A0J9YXY3 114 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 F8WDY8 70 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 CXCL5P42830 114 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 HERV-K104P63124 156 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 SCGB1D4Q6XE38 83 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 Q9HAA7 133 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 TP73-AS1Q9UF72 201 aa2.96□□□□□ -1.94
RBM39-235ENST00000490354 DNAH11Q96DT5 4516 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 GVQW2A0A096LPI5 108 aaPredicted RBP2.95□□□□□ -1.94
RBM39-235ENST00000490354 TIMM17BO60830 172 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 CKS1BP61024 79 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 SPAG11BQ08648 103 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 CIRBPQ14011 172 aaKnown RBP2.95□□□□□ -1.94
RBM39-235ENST00000490354 TAL2Q16559 108 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 Q6ZR54 194 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 Q6ZVH6 145 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 NOTCH2NLQ7Z3S9 236 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 C2orf48Q96LS8 159 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 SPANXB1Q9NS25 103 aaPredicted RBP2.95□□□□□ -1.94
RBM39-235ENST00000490354 TOMM7Q9P0U1 55 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 TGP01266 2768 aa2.95□□□□□ -1.94
RBM39-235ENST00000490354 ALMS1Q8TCU4 4167 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 KMT2AQ03164 3969 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 TENM2Q9NT68 2774 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 TMEM238C9JI98 176 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 HSD52Q0P140 79 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 SRSF9Q13242 221 aaKnown RBP eCLIP2.94□□□□□ -1.94
RBM39-235ENST00000490354 COX17Q14061 63 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 BATFQ16520 125 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 C15orf56Q8N910 161 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 HIST1H4GQ99525 98 aa2.94□□□□□ -1.94
RBM39-235ENST00000490354 FAT2Q9NYQ8 4349 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 TRBV30A0A0K0K1B3 111 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 USP17L23D6RBM5 183 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 TAX1BP3O14907 124 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 LY6G6CO95867 125 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 SMIM13P0DJ93 91 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 IFITM1P13164 125 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 HINT1P49773 126 aaPredicted RBP2.93□□□□□ -1.94
RBM39-235ENST00000490354 HIGD2BQ4VC39 106 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 MEIG1Q5JSS6 88 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 BVES-AS1Q5T3Y7 98 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 ADAMTSL4-AS1Q5T5F5 129 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 C2orf82Q6UX34 121 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 UNQ6190/PRO20217Q6UXQ8 127 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 Q6ZRN7 208 aaPredicted RBP2.93□□□□□ -1.94
RBM39-235ENST00000490354 CEND1Q8N111 149 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 C6orf223Q8N319 242 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 COPS9Q8WXC6 57 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 SPANXDQ9BXN6 97 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 PPDPFQ9H3Y8 114 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 SPANXCQ9NY87 97 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 ERG28Q9UKR5 140 aa2.93□□□□□ -1.94
RBM39-235ENST00000490354 LOC107984156A0A0G2JMH3 177 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 LRCOL1A6NCL2 159 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 M0R2N4 97 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 PSCAO43653 123 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 LINC00158P58513 81 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 RPL24P83731 157 aaKnown RBP2.92□□□□□ -1.94
RBM39-235ENST00000490354 SYCNQ0VAF6 134 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 C1orf134Q5TEV5 83 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 MUSTN1Q8IVN3 82 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 ARL17AQ8IVW1 177 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 LINC00526Q96FQ7 95 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 CAMK2N2Q96S95 79 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 C6orf48Q9UBA6 75 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 DNAH6Q9C0G6 4158 aa2.92□□□□□ -1.94
RBM39-235ENST00000490354 A0A0U1RRA0 63 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 A0A1B0GWB2 263 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 A6NDN8 102 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 NDUFC2-KCTD14E9PQ53 114 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 K7ERU9 68 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 TLX1NBP0CAT3 122 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 PFN2P35080 140 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 FXYD2P54710 66 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 CNBPP62633 177 aaKnown RBP2.91□□□□□ -1.94
RBM39-235ENST00000490354 VAMP3Q15836 100 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 OCIAD2Q56VL3 154 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 Q6ZRU5 148 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 MIR7-3HGQ8N6C7 128 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 DAND5Q8N907 189 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 LINC00308Q8TCZ7 52 aa2.91□□□□□ -1.94
RBM39-235ENST00000490354 KMT2CQ8NEZ4 4911 aaKnown RBP2.9□□□□□ -1.94
RBM39-235ENST00000490354 A0A087WTM6 91 aa2.9□□□□□ -1.95
RBM39-235ENST00000490354 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.9□□□□□ -1.95
RBM39-235ENST00000490354 A4D1N5 150 aa2.9□□□□□ -1.95
RBM39-235ENST00000490354 LECT2O14960 151 aa2.9□□□□□ -1.95
RBM39-235ENST00000490354 SEC61BP60468 96 aaKnown RBP2.9□□□□□ -1.95
RBM39-235ENST00000490354 WFDC2Q14508 124 aa2.9□□□□□ -1.95
RBM39-235ENST00000490354 C9orf116Q5BN46 136 aaPredicted RBP2.9□□□□□ -1.95
RBM39-235ENST00000490354 SOSTDC1Q6X4U4 206 aa2.9□□□□□ -1.95
RBM39-235ENST00000490354 CARD19Q96LW7 228 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms