RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 RPL18AQ02543 176 aaKnown RBP5.94□□□□□ -1.46
TMEM39A-210ENST00000490099 PHF5AQ7RTV0 110 aaKnown RBP5.94□□□□□ -1.46
TMEM39A-210ENST00000490099 FAM168BA1KXE4 195 aa5.93□□□□□ -1.46
TMEM39A-210ENST00000490099 H3BRM9 83 aa5.93□□□□□ -1.46
TMEM39A-210ENST00000490099 ZC2HC1BQ5TFG8 222 aa5.93□□□□□ -1.46
TMEM39A-210ENST00000490099 HSBP1L1C9JCN9 74 aa5.92□□□□□ -1.46
TMEM39A-210ENST00000490099 NDUFC2-KCTD14E9PQ53 114 aa5.92□□□□□ -1.46
TMEM39A-210ENST00000490099 SMIM6P0DI80 62 aa5.92□□□□□ -1.46
TMEM39A-210ENST00000490099 HERVK_113P61574 105 aa5.92□□□□□ -1.46
TMEM39A-210ENST00000490099 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
TMEM39A-210ENST00000490099 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
TMEM39A-210ENST00000490099 C2orf82Q6UX34 121 aa5.92□□□□□ -1.46
TMEM39A-210ENST00000490099 LINC00469Q8N7U9 141 aa5.92□□□□□ -1.46
TMEM39A-210ENST00000490099 PMCHL2Q9BQD1 86 aa5.92□□□□□ -1.46
TMEM39A-210ENST00000490099 IGLV5-45A0A087WSX0 123 aa5.91□□□□□ -1.46
TMEM39A-210ENST00000490099 C11orf86A6NJI1 115 aa5.91□□□□□ -1.46
TMEM39A-210ENST00000490099 IGLV7-43P04211 117 aa5.91□□□□□ -1.46
TMEM39A-210ENST00000490099 C9orf129Q5T035 196 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-210ENST00000490099 TMEM170BQ5T4T1 132 aa5.91□□□□□ -1.46
TMEM39A-210ENST00000490099 Q8IZM0 81 aa5.91□□□□□ -1.46
TMEM39A-210ENST00000490099 ZNF22P17026 224 aaPredicted RBP5.9□□□□□ -1.46
TMEM39A-210ENST00000490099 S100A12P80511 92 aa5.9□□□□□ -1.46
TMEM39A-210ENST00000490099 GAGE2EQ4V326 116 aa5.9□□□□□ -1.46
TMEM39A-210ENST00000490099 PYY3Q5JQD4 70 aa5.9□□□□□ -1.46
TMEM39A-210ENST00000490099 C1orf137Q5JT78 98 aa5.9□□□□□ -1.46
TMEM39A-210ENST00000490099 GAGE2DQ9UEU5 116 aa5.9□□□□□ -1.46
TMEM39A-210ENST00000490099 CDKN2A-AS1Q9UH64 79 aa5.9□□□□□ -1.46
TMEM39A-210ENST00000490099 ATOH7Q8N100 152 aa5.89□□□□□ -1.47
TMEM39A-210ENST00000490099 DIRC1Q969H9 104 aa5.89□□□□□ -1.47
TMEM39A-210ENST00000490099 VAMP8Q9BV40 100 aa5.89□□□□□ -1.47
TMEM39A-210ENST00000490099 LRP2P98164 4655 aa5.88□□□□□ -1.47
TMEM39A-210ENST00000490099 TMEM223A0PJW6 202 aa5.88□□□□□ -1.47
TMEM39A-210ENST00000490099 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
TMEM39A-210ENST00000490099 E9PLD3 99 aa5.87□□□□□ -1.47
TMEM39A-210ENST00000490099 H0Y9J4 135 aa5.87□□□□□ -1.47
TMEM39A-210ENST00000490099 C6orf226Q5I0X4 101 aa5.87□□□□□ -1.47
TMEM39A-210ENST00000490099 FAM19A5Q7Z5A7 132 aaPredicted RBP5.87□□□□□ -1.47
TMEM39A-210ENST00000490099 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
TMEM39A-210ENST00000490099 SMIM1B2RUZ4 78 aa5.86□□□□□ -1.47
TMEM39A-210ENST00000490099 M0QXV9 152 aa5.86□□□□□ -1.47
TMEM39A-210ENST00000490099 LEPROTO15243 131 aa5.86□□□□□ -1.47
TMEM39A-210ENST00000490099 PRSS2P07478 247 aa5.86□□□□□ -1.47
TMEM39A-210ENST00000490099 SPINK8P0C7L1 97 aa5.86□□□□□ -1.47
TMEM39A-210ENST00000490099 CKS1BP61024 79 aa5.86□□□□□ -1.47
TMEM39A-210ENST00000490099 SFTA2Q6UW10 78 aa5.86□□□□□ -1.47
TMEM39A-210ENST00000490099 IGLV5-39A0A0G2JS06 123 aa5.85□□□□□ -1.47
TMEM39A-210ENST00000490099 C21orf62-AS1Q17RA5 79 aa5.85□□□□□ -1.47
TMEM39A-210ENST00000490099 SPATA45Q537H7 98 aa5.85□□□□□ -1.47
TMEM39A-210ENST00000490099 PRR26Q8N8Z3 221 aa5.85□□□□□ -1.47
TMEM39A-210ENST00000490099 C12orf57Q99622 126 aa5.85□□□□□ -1.47
TMEM39A-210ENST00000490099 TOMM7Q9P0U1 55 aa5.85□□□□□ -1.47
TMEM39A-210ENST00000490099 TP73-AS1Q9UF72 201 aa5.85□□□□□ -1.47
TMEM39A-210ENST00000490099 PAM16Q9Y3D7 125 aa5.85□□□□□ -1.47
TMEM39A-210ENST00000490099 C22orf24Q9Y442 160 aa5.85□□□□□ -1.47
TMEM39A-210ENST00000490099 IGLV1-50A0A075B6I6 118 aa5.84□□□□□ -1.47
TMEM39A-210ENST00000490099 LGALS3P17931 250 aaKnown RBP5.84□□□□□ -1.47
TMEM39A-210ENST00000490099 CXCL5P42830 114 aa5.84□□□□□ -1.47
TMEM39A-210ENST00000490099 NMUP48645 174 aa5.84□□□□□ -1.47
TMEM39A-210ENST00000490099 COX7B2Q8TF08 81 aa5.84□□□□□ -1.47
TMEM39A-210ENST00000490099 J3QQQ9 107 aa5.83□□□□□ -1.48
TMEM39A-210ENST00000490099 ZNF861PO60384 105 aa5.83□□□□□ -1.48
TMEM39A-210ENST00000490099 LINC00518Q8N0U6 118 aa5.83□□□□□ -1.48
TMEM39A-210ENST00000490099 XAGE1AQ9HD64 81 aa5.83□□□□□ -1.48
TMEM39A-210ENST00000490099 UBE2BP63146 152 aa5.82□□□□□ -1.48
TMEM39A-210ENST00000490099 LBHQ53QV2 105 aaPredicted RBP5.82□□□□□ -1.48
TMEM39A-210ENST00000490099 IGLV5-37A0A075B6J1 123 aa5.81□□□□□ -1.48
TMEM39A-210ENST00000490099 MYMXA0A1B0GTQ4 84 aa5.81□□□□□ -1.48
TMEM39A-210ENST00000490099 COX8AP10176 69 aa5.81□□□□□ -1.48
TMEM39A-210ENST00000490099 HERV-K104P63124 156 aa5.81□□□□□ -1.48
TMEM39A-210ENST00000490099 NDUFA12Q9UI09 145 aa5.81□□□□□ -1.48
TMEM39A-210ENST00000490099 IGKV2D-26A0A0A0MRZ7 120 aa5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 ZNF815PA8K554 130 aa5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 LINC00587B1AMM8 73 aa5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 TSTD3H0UI37 97 aa5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 DLEU1O43261 78 aa5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 SLC25A34Q6PIV7 304 aa5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 MRPL55Q7Z7F7 128 aaKnown RBP5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
TMEM39A-210ENST00000490099 BCE1O60756 84 aa5.79□□□□□ -1.48
TMEM39A-210ENST00000490099 TSPEAR-AS2P59090 65 aa5.79□□□□□ -1.48
TMEM39A-210ENST00000490099 RPL13AP40429 203 aaKnown RBP5.78□□□□□ -1.48
TMEM39A-210ENST00000490099 SCGB1D4Q6XE38 83 aa5.78□□□□□ -1.48
TMEM39A-210ENST00000490099 KRTAP13-1Q8IUC0 172 aa5.78□□□□□ -1.48
TMEM39A-210ENST00000490099 PCP2Q8IVA1 136 aa5.78□□□□□ -1.48
TMEM39A-210ENST00000490099 BOD1L2Q8IYS8 172 aa5.78□□□□□ -1.48
TMEM39A-210ENST00000490099 ZNF625Q96I27 306 aaPredicted RBP5.78□□□□□ -1.48
TMEM39A-210ENST00000490099 C14orf144Q96I85 54 aa5.78□□□□□ -1.48
TMEM39A-210ENST00000490099 LINC00167Q96N53 147 aa5.78□□□□□ -1.48
TMEM39A-210ENST00000490099 UQCR10Q9UDW1 63 aa5.78□□□□□ -1.48
TMEM39A-210ENST00000490099 C9orf118A6NHY6 69 aa5.76□□□□□ -1.49
TMEM39A-210ENST00000490099 TMEM238C9JI98 176 aa5.76□□□□□ -1.49
TMEM39A-210ENST00000490099 TIMM17BO60830 172 aa5.76□□□□□ -1.49
TMEM39A-210ENST00000490099 RPL28P46779 137 aaKnown RBP5.76□□□□□ -1.49
TMEM39A-210ENST00000490099 COX17Q14061 63 aa5.76□□□□□ -1.49
TMEM39A-210ENST00000490099 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
TMEM39A-210ENST00000490099 MIEN1Q9BRT3 115 aa5.76□□□□□ -1.49
TMEM39A-210ENST00000490099 A0A0J9YXY3 114 aa5.75□□□□□ -1.49
TMEM39A-210ENST00000490099 COPS9Q8WXC6 57 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms