RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 TRAV12-1A0A0B4J245 112 aa12.95□□□□□ -0.34
HOXA9-205ENST00000489695 GAGE10A6NGK3 116 aa12.95□□□□□ -0.34
HOXA9-205ENST00000489695 KRTAP13-2Q52LG2 175 aa12.95□□□□□ -0.34
HOXA9-205ENST00000489695 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
HOXA9-205ENST00000489695 SND1-IT1Q9HBX3 110 aa12.95□□□□□ -0.34
HOXA9-205ENST00000489695 CHTOPQ9Y3Y2 248 aaKnown RBP12.95□□□□□ -0.34
HOXA9-205ENST00000489695 ZNF625Q96I27 306 aaPredicted RBP12.94□□□□□ -0.34
HOXA9-205ENST00000489695 CDIP1Q9H305 208 aa12.94□□□□□ -0.34
HOXA9-205ENST00000489695 ANAPC11Q9NYG5 84 aa12.94□□□□□ -0.34
HOXA9-205ENST00000489695 KRTAP13-1Q8IUC0 172 aa12.93□□□□□ -0.34
HOXA9-205ENST00000489695 VPREB1P12018 145 aa12.92□□□□□ -0.34
HOXA9-205ENST00000489695 IFI27L1Q96BM0 104 aa12.92□□□□□ -0.34
HOXA9-205ENST00000489695 TMEM223A0PJW6 202 aa12.9□□□□□ -0.34
HOXA9-205ENST00000489695 RPL24P83731 157 aaKnown RBP12.89□□□□□ -0.35
HOXA9-205ENST00000489695 FAM229BQ4G0N7 80 aa12.89□□□□□ -0.35
HOXA9-205ENST00000489695 LINC00304Q8N9R0 145 aa12.89□□□□□ -0.35
HOXA9-205ENST00000489695 HIST1H2BKO60814 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST1H2BJP06899 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST1H2BOP23527 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST1H2BBP33778 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST1H2BDP58876 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST1H2BCP62807 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST2H2BEQ16778 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST1H2BHQ93079 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST1H2BNQ99877 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 HIST1H2BMQ99879 126 aa12.88□□□□□ -0.35
HOXA9-205ENST00000489695 IGLV7-46A0A075B6I9 117 aa12.87□□□□□ -0.35
HOXA9-205ENST00000489695 IGKV2-28A0A075B6P5 120 aa12.87□□□□□ -0.35
HOXA9-205ENST00000489695 IGKV2D-28P01615 120 aa12.87□□□□□ -0.35
HOXA9-205ENST00000489695 CTAG1AP78358 180 aa12.86□□□□□ -0.35
HOXA9-205ENST00000489695 Q8NDZ9 215 aa12.86□□□□□ -0.35
HOXA9-205ENST00000489695 HSBP1O75506 76 aa12.85□□□□□ -0.35
HOXA9-205ENST00000489695 UBE2AP49459 152 aa12.85□□□□□ -0.35
HOXA9-205ENST00000489695 FAM19A2Q8N3H0 131 aa12.84□□□□□ -0.35
HOXA9-205ENST00000489695 TMEM126AQ9H061 195 aa12.83□□□□□ -0.36
HOXA9-205ENST00000489695 LINC00158P58513 81 aa12.82□□□□□ -0.36
HOXA9-205ENST00000489695 TMA7Q9Y2S6 64 aaKnown RBP12.81□□□□□ -0.36
HOXA9-205ENST00000489695 TMEM238C9JI98 176 aa12.8□□□□□ -0.36
HOXA9-205ENST00000489695 M0R378 163 aa12.8□□□□□ -0.36
HOXA9-205ENST00000489695 LINC00310P59036 64 aa12.8□□□□□ -0.36
HOXA9-205ENST00000489695 IGKV2D-26A0A0A0MRZ7 120 aa12.79□□□□□ -0.36
HOXA9-205ENST00000489695 HERV-K104P63124 156 aa12.78□□□□□ -0.36
HOXA9-205ENST00000489695 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
HOXA9-205ENST00000489695 FAM19A1Q7Z5A9 133 aa12.78□□□□□ -0.36
HOXA9-205ENST00000489695 PPDPFQ9H3Y8 114 aa12.78□□□□□ -0.36
HOXA9-205ENST00000489695 SERF1AO75920 110 aa12.77□□□□□ -0.37
HOXA9-205ENST00000489695 LEPROTL1O95214 131 aa12.77□□□□□ -0.37
HOXA9-205ENST00000489695 PRLHP81277 87 aa12.77□□□□□ -0.37
HOXA9-205ENST00000489695 A0A0U1RRA0 63 aa12.76□□□□□ -0.37
HOXA9-205ENST00000489695 SMIM13P0DJ93 91 aa12.76□□□□□ -0.37
HOXA9-205ENST00000489695 S100A6P06703 90 aa12.75□□□□□ -0.37
HOXA9-205ENST00000489695 COA6Q5JTJ3 125 aaKnown RBP12.75□□□□□ -0.37
HOXA9-205ENST00000489695 LINC00587B1AMM8 73 aa12.74□□□□□ -0.37
HOXA9-205ENST00000489695 NDUFA12Q9UI09 145 aa12.74□□□□□ -0.37
HOXA9-205ENST00000489695 FSIP2Q5CZC0 6907 aa12.74□□□□□ -0.37
HOXA9-205ENST00000489695 MEIG1Q5JSS6 88 aa12.73□□□□□ -0.37
HOXA9-205ENST00000489695 MYMXA0A1B0GTQ4 84 aa12.72□□□□□ -0.37
HOXA9-205ENST00000489695 MIR7-3HGQ8N6C7 128 aa12.72□□□□□ -0.37
HOXA9-205ENST00000489695 PLEKHB2Q96CS7 222 aa12.72□□□□□ -0.37
HOXA9-205ENST00000489695 HSPB8Q9UJY1 196 aa12.71□□□□□ -0.37
HOXA9-205ENST00000489695 H0Y8G0 127 aa12.7□□□□□ -0.38
HOXA9-205ENST00000489695 PLNP26678 52 aa12.7□□□□□ -0.38
HOXA9-205ENST00000489695 BOD1L2Q8IYS8 172 aa12.7□□□□□ -0.38
HOXA9-205ENST00000489695 LEPROTO15243 131 aa12.69□□□□□ -0.38
HOXA9-205ENST00000489695 SNRPEP62304 92 aaKnown RBP12.69□□□□□ -0.38
HOXA9-205ENST00000489695 LOC107984156A0A0G2JMH3 177 aa12.68□□□□□ -0.38
HOXA9-205ENST00000489695 LINC01547P58512 204 aaPredicted RBP12.68□□□□□ -0.38
HOXA9-205ENST00000489695 TSPEAR-AS2P59090 65 aa12.68□□□□□ -0.38
HOXA9-205ENST00000489695 ARL17AQ8IVW1 177 aa12.68□□□□□ -0.38
HOXA9-205ENST00000489695 MAP1LC3CQ9BXW4 147 aa12.68□□□□□ -0.38
HOXA9-205ENST00000489695 SPRR1AP35321 89 aa12.67□□□□□ -0.38
HOXA9-205ENST00000489695 ASB16-AS1Q495Z4 193 aa12.67□□□□□ -0.38
HOXA9-205ENST00000489695 FP248Q71RG6 208 aaPredicted RBP12.67□□□□□ -0.38
HOXA9-205ENST00000489695 C3orf22Q8N5N4 141 aa12.67□□□□□ -0.38
HOXA9-205ENST00000489695 KCNQ1DNQ9H478 68 aa12.67□□□□□ -0.38
HOXA9-205ENST00000489695 CRCT1Q9UGL9 99 aa12.67□□□□□ -0.38
HOXA9-205ENST00000489695 C5orf52A6NGY3 159 aa12.66□□□□□ -0.38
HOXA9-205ENST00000489695 PRYO14603 147 aa12.66□□□□□ -0.38
HOXA9-205ENST00000489695 DPM2O94777 84 aa12.66□□□□□ -0.38
HOXA9-205ENST00000489695 SPAG11AQ6PDA7 123 aa12.66□□□□□ -0.38
HOXA9-205ENST00000489695 FABP4P15090 132 aa12.65□□□□□ -0.38
HOXA9-205ENST00000489695 HIST3H2BBQ8N257 126 aa12.65□□□□□ -0.38
HOXA9-205ENST00000489695 LINC00337Q8N6G1 96 aa12.65□□□□□ -0.38
HOXA9-205ENST00000489695 HIGD2AQ9BW72 106 aa12.65□□□□□ -0.38
HOXA9-205ENST00000489695 J3QQQ9 107 aa12.64□□□□□ -0.39
HOXA9-205ENST00000489695 KRTAP4-16G5E9R7 235 aaPredicted RBP12.63□□□□□ -0.39
HOXA9-205ENST00000489695 NCR3O14931 201 aa12.63□□□□□ -0.39
HOXA9-205ENST00000489695 IGKCP01834 107 aa12.63□□□□□ -0.39
HOXA9-205ENST00000489695 S100A2P29034 98 aa12.63□□□□□ -0.39
HOXA9-205ENST00000489695 KRTAP13-3Q3SY46 172 aa12.63□□□□□ -0.39
HOXA9-205ENST00000489695 NMUP48645 174 aa12.62□□□□□ -0.39
HOXA9-205ENST00000489695 HERVK_113P61574 105 aa12.62□□□□□ -0.39
HOXA9-205ENST00000489695 SPRR4Q96PI1 79 aa12.62□□□□□ -0.39
HOXA9-205ENST00000489695 PMCHL2Q9BQD1 86 aa12.62□□□□□ -0.39
HOXA9-205ENST00000489695 KRTAP4-1Q9BYQ7 146 aa12.62□□□□□ -0.39
HOXA9-205ENST00000489695 TRBV10-3A0A0K0K1G6 114 aa12.6□□□□□ -0.39
HOXA9-205ENST00000489695 TRBV10-2A0A0K0K1G8 114 aa12.59□□□□□ -0.39
HOXA9-205ENST00000489695 DAND5Q8N907 189 aa12.59□□□□□ -0.39
HOXA9-205ENST00000489695 HIST1H2BLQ99880 126 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms