RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ZNF625Q96I27 306 aaPredicted RBP9.61□□□□□ -0.87
TOP3B-217ENST00000489581 KRTAP4-1Q9BYQ7 146 aa9.61□□□□□ -0.87
TOP3B-217ENST00000489581 IGLV5-39A0A0G2JS06 123 aa9.6□□□□□ -0.87
TOP3B-217ENST00000489581 GHRHP01286 108 aa9.6□□□□□ -0.87
TOP3B-217ENST00000489581 ASB16-AS1Q495Z4 193 aa9.6□□□□□ -0.87
TOP3B-217ENST00000489581 SPRR4Q96PI1 79 aa9.6□□□□□ -0.87
TOP3B-217ENST00000489581 LINC01546A6NGU7 62 aa9.59□□□□□ -0.87
TOP3B-217ENST00000489581 DAND5Q8N907 189 aa9.59□□□□□ -0.87
TOP3B-217ENST00000489581 IGLC3P0DOY3 106 aa9.57□□□□□ -0.88
TOP3B-217ENST00000489581 ZNF22P17026 224 aaPredicted RBP9.57□□□□□ -0.88
TOP3B-217ENST00000489581 COX17Q14061 63 aa9.57□□□□□ -0.88
TOP3B-217ENST00000489581 Q8NBF4 154 aa9.57□□□□□ -0.88
TOP3B-217ENST00000489581 NDUFA6P56556 154 aa9.56□□□□□ -0.88
TOP3B-217ENST00000489581 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
TOP3B-217ENST00000489581 SMCO4Q9NRQ5 59 aa9.54□□□□□ -0.88
TOP3B-217ENST00000489581 ZNF706Q9Y5V0 76 aaPredicted RBP9.54□□□□□ -0.88
TOP3B-217ENST00000489581 SEC61BP60468 96 aaKnown RBP9.53□□□□□ -0.88
TOP3B-217ENST00000489581 S100A1P23297 94 aa9.52□□□□□ -0.89
TOP3B-217ENST00000489581 LINC00158P58513 81 aa9.52□□□□□ -0.89
TOP3B-217ENST00000489581 CRCT1Q9UGL9 99 aa9.52□□□□□ -0.89
TOP3B-217ENST00000489581 TRAV9-1A0A075B6T8 112 aa9.51□□□□□ -0.89
TOP3B-217ENST00000489581 A0A0U1RRA0 63 aa9.51□□□□□ -0.89
TOP3B-217ENST00000489581 SPINK1P00995 79 aa9.51□□□□□ -0.89
TOP3B-217ENST00000489581 NDUFA5Q16718 116 aa9.5□□□□□ -0.89
TOP3B-217ENST00000489581 SMCR5Q8TEV8 140 aa9.5□□□□□ -0.89
TOP3B-217ENST00000489581 FSIP2Q5CZC0 6907 aa9.49□□□□□ -0.89
TOP3B-217ENST00000489581 A0A096LNJ9 63 aa9.49□□□□□ -0.89
TOP3B-217ENST00000489581 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
TOP3B-217ENST00000489581 C11orf86A6NJI1 115 aa9.48□□□□□ -0.89
TOP3B-217ENST00000489581 FABP9Q0Z7S8 132 aa9.48□□□□□ -0.89
TOP3B-217ENST00000489581 TMEM170BQ5T4T1 132 aa9.48□□□□□ -0.89
TOP3B-217ENST00000489581 SFTA2Q6UW10 78 aa9.48□□□□□ -0.89
TOP3B-217ENST00000489581 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
TOP3B-217ENST00000489581 PRYO14603 147 aa9.47□□□□□ -0.89
TOP3B-217ENST00000489581 EIF4EBP3O60516 100 aaPredicted RBP9.47□□□□□ -0.89
TOP3B-217ENST00000489581 S100PP25815 95 aa9.46□□□□□ -0.9
TOP3B-217ENST00000489581 BAGE3Q86Y29 109 aa9.46□□□□□ -0.9
TOP3B-217ENST00000489581 NCR3O14931 201 aa9.45□□□□□ -0.9
TOP3B-217ENST00000489581 NDUFA12Q9UI09 145 aa9.45□□□□□ -0.9
TOP3B-217ENST00000489581 ETDCA0A1B0GVM5 59 aa9.44□□□□□ -0.9
TOP3B-217ENST00000489581 SPRR1AP35321 89 aa9.44□□□□□ -0.9
TOP3B-217ENST00000489581 PMCHL1Q16048 86 aa9.44□□□□□ -0.9
TOP3B-217ENST00000489581 GAGE2AQ6NT46 116 aa9.44□□□□□ -0.9
TOP3B-217ENST00000489581 BOD1L2Q8IYS8 172 aa9.44□□□□□ -0.9
TOP3B-217ENST00000489581 Q8N377 158 aa9.44□□□□□ -0.9
TOP3B-217ENST00000489581 URB1-AS1Q96HZ7 61 aa9.44□□□□□ -0.9
TOP3B-217ENST00000489581 KCNQ1DNQ9H478 68 aa9.44□□□□□ -0.9
TOP3B-217ENST00000489581 IGLV9-49A0A0B4J1Y8 123 aa9.43□□□□□ -0.9
TOP3B-217ENST00000489581 KRTAP4-16G5E9R7 235 aaPredicted RBP9.43□□□□□ -0.9
TOP3B-217ENST00000489581 SMIM13P0DJ93 91 aa9.43□□□□□ -0.9
TOP3B-217ENST00000489581 MOBPQ13875 183 aa9.43□□□□□ -0.9
TOP3B-217ENST00000489581 COX19Q49B96 90 aa9.43□□□□□ -0.9
TOP3B-217ENST00000489581 LINC00483Q53H64 154 aa9.43□□□□□ -0.9
TOP3B-217ENST00000489581 HBDP02042 147 aa9.42□□□□□ -0.9
TOP3B-217ENST00000489581 LINC00614P0C842 121 aa9.42□□□□□ -0.9
TOP3B-217ENST00000489581 FAM19A2Q8N3H0 131 aa9.41□□□□□ -0.9
TOP3B-217ENST00000489581 TRBV10-3A0A0K0K1G6 114 aa9.4□□□□□ -0.9
TOP3B-217ENST00000489581 TMEM218A2RU14 115 aa9.4□□□□□ -0.9
TOP3B-217ENST00000489581 RPS29P62273 56 aaKnown RBP9.4□□□□□ -0.9
TOP3B-217ENST00000489581 XP32Q5T750 250 aa9.4□□□□□ -0.9
TOP3B-217ENST00000489581 SSBP3-AS1Q7Z2R9 100 aa9.4□□□□□ -0.9
TOP3B-217ENST00000489581 SLC25A20O43772 301 aa9.39□□□□□ -0.91
TOP3B-217ENST00000489581 ERC2-IT1O76042 136 aa9.39□□□□□ -0.91
TOP3B-217ENST00000489581 MIR7-3HGQ8N6C7 128 aa9.39□□□□□ -0.91
TOP3B-217ENST00000489581 C18orf32Q8TCD1 76 aa9.39□□□□□ -0.91
TOP3B-217ENST00000489581 CHTOPQ9Y3Y2 248 aaKnown RBP9.39□□□□□ -0.91
TOP3B-217ENST00000489581 TMEM223A0PJW6 202 aa9.38□□□□□ -0.91
TOP3B-217ENST00000489581 MEIG1Q5JSS6 88 aa9.38□□□□□ -0.91
TOP3B-217ENST00000489581 SEC11CQ9BY50 192 aa9.38□□□□□ -0.91
TOP3B-217ENST00000489581 B5MCH6 92 aa9.36□□□□□ -0.91
TOP3B-217ENST00000489581 CLLU1Q5K131 121 aa9.36□□□□□ -0.91
TOP3B-217ENST00000489581 UQCC3Q6UW78 93 aa9.35□□□□□ -0.91
TOP3B-217ENST00000489581 S100A12P80511 92 aa9.34□□□□□ -0.91
TOP3B-217ENST00000489581 KRTAP19-2Q3LHN2 52 aa9.34□□□□□ -0.91
TOP3B-217ENST00000489581 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
TOP3B-217ENST00000489581 Q9BRP9 147 aa9.33□□□□□ -0.92
TOP3B-217ENST00000489581 HERV-K104P63124 156 aa9.32□□□□□ -0.92
TOP3B-217ENST00000489581 MT1HP80294 61 aa9.31□□□□□ -0.92
TOP3B-217ENST00000489581 C9orf153Q5TBE3 101 aa9.31□□□□□ -0.92
TOP3B-217ENST00000489581 RPS10P5Q9NQ39 176 aa9.31□□□□□ -0.92
TOP3B-217ENST00000489581 DDTP30046 118 aa9.3□□□□□ -0.92
TOP3B-217ENST00000489581 TRAV12-1A0A0B4J245 112 aa9.29□□□□□ -0.92
TOP3B-217ENST00000489581 LINC00587B1AMM8 73 aa9.29□□□□□ -0.92
TOP3B-217ENST00000489581 Q6ZRX8 168 aa9.29□□□□□ -0.92
TOP3B-217ENST00000489581 IFI27L1Q96BM0 104 aa9.29□□□□□ -0.92
TOP3B-217ENST00000489581 PCOTHQ58A44 107 aa9.28□□□□□ -0.92
TOP3B-217ENST00000489581 MAP1LC3CQ9BXW4 147 aa9.28□□□□□ -0.92
TOP3B-217ENST00000489581 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.93
TOP3B-217ENST00000489581 MYMXA0A1B0GTQ4 84 aa9.27□□□□□ -0.93
TOP3B-217ENST00000489581 TMA7Q9Y2S6 64 aaKnown RBP9.27□□□□□ -0.93
TOP3B-217ENST00000489581 RHEBQ15382 184 aa9.26□□□□□ -0.93
TOP3B-217ENST00000489581 LOC107984156A0A0G2JMH3 177 aa9.25□□□□□ -0.93
TOP3B-217ENST00000489581 TRBV10-2A0A0K0K1G8 114 aa9.25□□□□□ -0.93
TOP3B-217ENST00000489581 CFC1BP0CG36 223 aa9.25□□□□□ -0.93
TOP3B-217ENST00000489581 ARL17AQ8IVW1 177 aa9.25□□□□□ -0.93
TOP3B-217ENST00000489581 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
TOP3B-217ENST00000489581 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
TOP3B-217ENST00000489581 TSPEAR-AS2P59090 65 aa9.22□□□□□ -0.93
TOP3B-217ENST00000489581 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
TOP3B-217ENST00000489581 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms