RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PRSS2P07478 247 aa6.84□□□□□ -1.31
SCAMP4-208ENST00000489554 KIAA0087Q14695 138 aa6.84□□□□□ -1.31
SCAMP4-208ENST00000489554 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
SCAMP4-208ENST00000489554 APOMO95445 188 aa6.83□□□□□ -1.32
SCAMP4-208ENST00000489554 CXCL5P42830 114 aa6.83□□□□□ -1.32
SCAMP4-208ENST00000489554 MEIG1Q5JSS6 88 aa6.83□□□□□ -1.32
SCAMP4-208ENST00000489554 MUSTN1Q8IVN3 82 aa6.83□□□□□ -1.32
SCAMP4-208ENST00000489554 PRO1854Q9UHT4 67 aa6.83□□□□□ -1.32
SCAMP4-208ENST00000489554 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
SCAMP4-208ENST00000489554 GVQW2A0A096LPI5 108 aaPredicted RBP6.82□□□□□ -1.32
SCAMP4-208ENST00000489554 K7EP34 96 aa6.82□□□□□ -1.32
SCAMP4-208ENST00000489554 PLA2G1BP04054 148 aaKnown RBP6.82□□□□□ -1.32
SCAMP4-208ENST00000489554 SCXQ7RTU7 201 aa6.82□□□□□ -1.32
SCAMP4-208ENST00000489554 SPCS1Q9Y6A9 102 aa6.82□□□□□ -1.32
SCAMP4-208ENST00000489554 TRBV20-1A0A075B6N2 111 aa6.81□□□□□ -1.32
SCAMP4-208ENST00000489554 SLPIP03973 132 aa6.81□□□□□ -1.32
SCAMP4-208ENST00000489554 C6orf226Q5I0X4 101 aa6.81□□□□□ -1.32
SCAMP4-208ENST00000489554 Q8IZM0 81 aa6.81□□□□□ -1.32
SCAMP4-208ENST00000489554 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
SCAMP4-208ENST00000489554 LINC00526Q96FQ7 95 aa6.81□□□□□ -1.32
SCAMP4-208ENST00000489554 ERG28Q9UKR5 140 aa6.81□□□□□ -1.32
SCAMP4-208ENST00000489554 A4D1N5 150 aa6.8□□□□□ -1.32
SCAMP4-208ENST00000489554 CFC1BP0CG36 223 aa6.8□□□□□ -1.32
SCAMP4-208ENST00000489554 CFC1P0CG37 223 aa6.8□□□□□ -1.32
SCAMP4-208ENST00000489554 MALP21145 153 aa6.8□□□□□ -1.32
SCAMP4-208ENST00000489554 HIGD2BQ4VC39 106 aa6.8□□□□□ -1.32
SCAMP4-208ENST00000489554 C9orf163Q8N9P6 203 aa6.8□□□□□ -1.32
SCAMP4-208ENST00000489554 ZNF625Q96I27 306 aaPredicted RBP6.8□□□□□ -1.32
SCAMP4-208ENST00000489554 LITAFQ99732 161 aa6.8□□□□□ -1.32
SCAMP4-208ENST00000489554 TOMM7Q9P0U1 55 aa6.8□□□□□ -1.32
SCAMP4-208ENST00000489554 K7ERJ3 54 aa6.79□□□□□ -1.32
SCAMP4-208ENST00000489554 COX6CP09669 75 aa6.79□□□□□ -1.32
SCAMP4-208ENST00000489554 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
SCAMP4-208ENST00000489554 SPAG11BQ08648 103 aa6.79□□□□□ -1.32
SCAMP4-208ENST00000489554 CFAP161Q6P656 301 aa6.79□□□□□ -1.32
SCAMP4-208ENST00000489554 CIRBP-AS1Q8TBR5 109 aa6.79□□□□□ -1.32
SCAMP4-208ENST00000489554 CKS1BP61024 79 aa6.78□□□□□ -1.32
SCAMP4-208ENST00000489554 COX17Q14061 63 aa6.78□□□□□ -1.32
SCAMP4-208ENST00000489554 F8W1H4 67 aa6.77□□□□□ -1.33
SCAMP4-208ENST00000489554 SCGB1C2P0DMR2 95 aa6.77□□□□□ -1.33
SCAMP4-208ENST00000489554 PSMB2P49721 201 aa6.77□□□□□ -1.33
SCAMP4-208ENST00000489554 C10orf25Q5T742 122 aa6.77□□□□□ -1.33
SCAMP4-208ENST00000489554 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
SCAMP4-208ENST00000489554 LINC00308Q8TCZ7 52 aa6.77□□□□□ -1.33
SCAMP4-208ENST00000489554 LOC107984156A0A0G2JMH3 177 aa6.76□□□□□ -1.33
SCAMP4-208ENST00000489554 F8WDY8 70 aa6.76□□□□□ -1.33
SCAMP4-208ENST00000489554 TSPAN13O95857 204 aa6.76□□□□□ -1.33
SCAMP4-208ENST00000489554 Q1RN00 199 aa6.76□□□□□ -1.33
SCAMP4-208ENST00000489554 ADAMTSL4-AS1Q5T5F5 129 aa6.76□□□□□ -1.33
SCAMP4-208ENST00000489554 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
SCAMP4-208ENST00000489554 ARL17AQ8IVW1 177 aa6.76□□□□□ -1.33
SCAMP4-208ENST00000489554 C2orf48Q96LS8 159 aa6.76□□□□□ -1.33
SCAMP4-208ENST00000489554 SRRM2Q9UQ35 2752 aaKnown RBP6.75□□□□□ -1.33
SCAMP4-208ENST00000489554 TRAV13-2A0A0B4J235 113 aa6.75□□□□□ -1.33
SCAMP4-208ENST00000489554 TRBV30A0A0K0K1B3 111 aa6.75□□□□□ -1.33
SCAMP4-208ENST00000489554 LINC00158P58513 81 aa6.75□□□□□ -1.33
SCAMP4-208ENST00000489554 UNQ6190/PRO20217Q6UXQ8 127 aa6.75□□□□□ -1.33
SCAMP4-208ENST00000489554 Q6ZRU5 148 aa6.75□□□□□ -1.33
SCAMP4-208ENST00000489554 DMBT1Q9UGM3 2413 aaPredicted RBP6.74□□□□□ -1.33
SCAMP4-208ENST00000489554 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
SCAMP4-208ENST00000489554 C6orf48Q9UBA6 75 aa6.74□□□□□ -1.33
SCAMP4-208ENST00000489554 FLG2Q5D862 2391 aaPredicted RBP6.74□□□□□ -1.33
SCAMP4-208ENST00000489554 NAA38Q9BRA0 125 aaKnown RBP6.73□□□□□ -1.33
SCAMP4-208ENST00000489554 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
SCAMP4-208ENST00000489554 MYCBP2O75592 4640 aa6.73□□□□□ -1.33
SCAMP4-208ENST00000489554 SYCNQ0VAF6 134 aa6.72□□□□□ -1.33
SCAMP4-208ENST00000489554 C9orf116Q5BN46 136 aaPredicted RBP6.72□□□□□ -1.33
SCAMP4-208ENST00000489554 MIR7-3HGQ8N6C7 128 aa6.72□□□□□ -1.33
SCAMP4-208ENST00000489554 CAMK2N2Q96S95 79 aa6.72□□□□□ -1.33
SCAMP4-208ENST00000489554 PANO1I0J062 215 aa6.71□□□□□ -1.34
SCAMP4-208ENST00000489554 J3QR89 54 aa6.71□□□□□ -1.34
SCAMP4-208ENST00000489554 K7ERU9 68 aa6.71□□□□□ -1.34
SCAMP4-208ENST00000489554 KRTAP10-4P60372 401 aaPredicted RBP6.71□□□□□ -1.34
SCAMP4-208ENST00000489554 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.34
SCAMP4-208ENST00000489554 ATXN8Q156A1 80 aa6.71□□□□□ -1.34
SCAMP4-208ENST00000489554 RNF151Q2KHN1 245 aa6.71□□□□□ -1.34
SCAMP4-208ENST00000489554 CARD19Q96LW7 228 aa6.71□□□□□ -1.34
SCAMP4-208ENST00000489554 A0A0U1RRA0 63 aa6.7□□□□□ -1.34
SCAMP4-208ENST00000489554 J3QL48 77 aa6.7□□□□□ -1.34
SCAMP4-208ENST00000489554 DPH3Q96FX2 82 aa6.7□□□□□ -1.34
SCAMP4-208ENST00000489554 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
SCAMP4-208ENST00000489554 PKIGQ9Y2B9 76 aa6.7□□□□□ -1.34
SCAMP4-208ENST00000489554 KRTAP29-1A8MX34 341 aaPredicted RBP6.69□□□□□ -1.34
SCAMP4-208ENST00000489554 H3BMG7 143 aa6.69□□□□□ -1.34
SCAMP4-208ENST00000489554 H7C2G1 150 aa6.69□□□□□ -1.34
SCAMP4-208ENST00000489554 NDUFC2O95298 119 aa6.69□□□□□ -1.34
SCAMP4-208ENST00000489554 RPL13AP40429 203 aaKnown RBP6.69□□□□□ -1.34
SCAMP4-208ENST00000489554 NPC2P61916 151 aa6.69□□□□□ -1.34
SCAMP4-208ENST00000489554 DAND5Q8N907 189 aa6.69□□□□□ -1.34
SCAMP4-208ENST00000489554 SPACA4Q8TDM5 124 aa6.69□□□□□ -1.34
SCAMP4-208ENST00000489554 A0A087WYN8 130 aa6.68□□□□□ -1.34
SCAMP4-208ENST00000489554 M0QXV9 152 aa6.68□□□□□ -1.34
SCAMP4-208ENST00000489554 TLX1NBP0CAT3 122 aa6.68□□□□□ -1.34
SCAMP4-208ENST00000489554 CHTF8P0CG12 524 aa6.68□□□□□ -1.34
SCAMP4-208ENST00000489554 PFN2P35080 140 aa6.68□□□□□ -1.34
SCAMP4-208ENST00000489554 HERC1Q15751 4861 aa6.68□□□□□ -1.34
SCAMP4-208ENST00000489554 Q6ZRP5 223 aa6.67□□□□□ -1.34
SCAMP4-208ENST00000489554 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
SCAMP4-208ENST00000489554 CBY1Q9Y3M2 126 aa6.67□□□□□ -1.34
SCAMP4-208ENST00000489554 H0YGX0 51 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms