RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PLA2G2DQ9UNK4 145 aa10.69□□□□□ -0.7
MDC1-206ENST00000489540 TP73-AS1Q9UF72 201 aa10.68□□□□□ -0.7
MDC1-206ENST00000489540 LRP1Q07954 4544 aaKnown RBP10.68□□□□□ -0.7
MDC1-206ENST00000489540 DPM2O94777 84 aa10.67□□□□□ -0.7
MDC1-206ENST00000489540 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
MDC1-206ENST00000489540 FAT3Q8TDW7 4589 aa10.66□□□□□ -0.7
MDC1-206ENST00000489540 IGLV7-43P04211 117 aa10.65□□□□□ -0.7
MDC1-206ENST00000489540 MRPL55Q7Z7F7 128 aaKnown RBP10.65□□□□□ -0.7
MDC1-206ENST00000489540 IGKCP01834 107 aa10.64□□□□□ -0.71
MDC1-206ENST00000489540 HERV-K104P63124 156 aa10.64□□□□□ -0.71
MDC1-206ENST00000489540 REG3GQ6UW15 175 aa10.64□□□□□ -0.71
MDC1-206ENST00000489540 SND1-IT1Q9HBX3 110 aa10.64□□□□□ -0.71
MDC1-206ENST00000489540 HERC1Q15751 4861 aa10.64□□□□□ -0.71
MDC1-206ENST00000489540 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
MDC1-206ENST00000489540 SCGB1D1O95968 90 aa10.63□□□□□ -0.71
MDC1-206ENST00000489540 LINC00158P58513 81 aa10.63□□□□□ -0.71
MDC1-206ENST00000489540 HERVK_113P61574 105 aa10.63□□□□□ -0.71
MDC1-206ENST00000489540 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
MDC1-206ENST00000489540 LINC00587B1AMM8 73 aa10.62□□□□□ -0.71
MDC1-206ENST00000489540 PLEKHB2Q96CS7 222 aa10.62□□□□□ -0.71
MDC1-206ENST00000489540 NDUFA12Q9UI09 145 aa10.62□□□□□ -0.71
MDC1-206ENST00000489540 MYMXA0A1B0GTQ4 84 aa10.61□□□□□ -0.71
MDC1-206ENST00000489540 SYS1-DBNDD2H3BUS1 97 aa10.61□□□□□ -0.71
MDC1-206ENST00000489540 LEPROTO15243 131 aa10.61□□□□□ -0.71
MDC1-206ENST00000489540 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
MDC1-206ENST00000489540 NKAPP1Q8N9T2 125 aa10.61□□□□□ -0.71
MDC1-206ENST00000489540 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
MDC1-206ENST00000489540 LINC00167Q96N53 147 aa10.6□□□□□ -0.71
MDC1-206ENST00000489540 DIRC1Q969H9 104 aa10.59□□□□□ -0.71
MDC1-206ENST00000489540 CTAG1AP78358 180 aa10.58□□□□□ -0.72
MDC1-206ENST00000489540 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
MDC1-206ENST00000489540 PET117Q6UWS5 81 aa10.58□□□□□ -0.72
MDC1-206ENST00000489540 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
MDC1-206ENST00000489540 J3QQQ9 107 aa10.58□□□□□ -0.72
MDC1-206ENST00000489540 SMIM13P0DJ93 91 aa10.58□□□□□ -0.72
MDC1-206ENST00000489540 MT1HL1P0DM35 61 aa10.58□□□□□ -0.72
MDC1-206ENST00000489540 DDTP30046 118 aa10.58□□□□□ -0.72
MDC1-206ENST00000489540 GAGE10A6NGK3 116 aa10.57□□□□□ -0.72
MDC1-206ENST00000489540 RPL37AP8A6NKH3 93 aa10.57□□□□□ -0.72
MDC1-206ENST00000489540 VPREB1P12018 145 aa10.57□□□□□ -0.72
MDC1-206ENST00000489540 NMUP48645 174 aa10.57□□□□□ -0.72
MDC1-206ENST00000489540 LGALS3P17931 250 aaKnown RBP10.56□□□□□ -0.72
MDC1-206ENST00000489540 TSPEAR-AS2P59090 65 aa10.56□□□□□ -0.72
MDC1-206ENST00000489540 LINC01545Q5VT33 79 aa10.56□□□□□ -0.72
MDC1-206ENST00000489540 H0Y9J4 135 aa10.54□□□□□ -0.72
MDC1-206ENST00000489540 ZNF861PO60384 105 aa10.54□□□□□ -0.72
MDC1-206ENST00000489540 BCE1O60756 84 aa10.54□□□□□ -0.72
MDC1-206ENST00000489540 KRTDAPP60985 99 aa10.54□□□□□ -0.72
MDC1-206ENST00000489540 MIR7-3HGQ8N6C7 128 aa10.54□□□□□ -0.72
MDC1-206ENST00000489540 VAMP8Q9BV40 100 aa10.54□□□□□ -0.72
MDC1-206ENST00000489540 E9PLD3 99 aa10.53□□□□□ -0.72
MDC1-206ENST00000489540 C3orf79P0CE67 100 aa10.53□□□□□ -0.72
MDC1-206ENST00000489540 PRO1933Q9H354 126 aa10.53□□□□□ -0.72
MDC1-206ENST00000489540 SVIPQ8NHG7 77 aa10.52□□□□□ -0.73
MDC1-206ENST00000489540 IGLV1-50A0A075B6I6 118 aa10.51□□□□□ -0.73
MDC1-206ENST00000489540 RPL28P46779 137 aaKnown RBP10.51□□□□□ -0.73
MDC1-206ENST00000489540 IGKV2-28A0A075B6P5 120 aa10.5□□□□□ -0.73
MDC1-206ENST00000489540 C20orf202A1L168 122 aa10.5□□□□□ -0.73
MDC1-206ENST00000489540 IGKV2D-28P01615 120 aa10.5□□□□□ -0.73
MDC1-206ENST00000489540 KRTAP10-8P60410 259 aa10.5□□□□□ -0.73
MDC1-206ENST00000489540 BOD1L2Q8IYS8 172 aa10.5□□□□□ -0.73
MDC1-206ENST00000489540 Q8NDZ9 215 aa10.5□□□□□ -0.73
MDC1-206ENST00000489540 M0R378 163 aa10.49□□□□□ -0.73
MDC1-206ENST00000489540 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
MDC1-206ENST00000489540 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
MDC1-206ENST00000489540 C14orf144Q96I85 54 aa10.48□□□□□ -0.73
MDC1-206ENST00000489540 IGKV2D-26A0A0A0MRZ7 120 aa10.46□□□□□ -0.74
MDC1-206ENST00000489540 UBE2AP49459 152 aa10.46□□□□□ -0.74
MDC1-206ENST00000489540 MIEN1Q9BRT3 115 aa10.46□□□□□ -0.74
MDC1-206ENST00000489540 TNXBP22105 4242 aa10.45□□□□□ -0.74
MDC1-206ENST00000489540 A0A0J9YXY3 114 aa10.45□□□□□ -0.74
MDC1-206ENST00000489540 DAND5Q8N907 189 aa10.45□□□□□ -0.74
MDC1-206ENST00000489540 TMEM126AQ9H061 195 aa10.44□□□□□ -0.74
MDC1-206ENST00000489540 PAM16Q9Y3D7 125 aa10.44□□□□□ -0.74
MDC1-206ENST00000489540 TMEM238C9JI98 176 aa10.43□□□□□ -0.74
MDC1-206ENST00000489540 KRTAP1-4P0C5Y4 121 aa10.43□□□□□ -0.74
MDC1-206ENST00000489540 SPATA45Q537H7 98 aa10.42□□□□□ -0.74
MDC1-206ENST00000489540 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
MDC1-206ENST00000489540 FAM19A1Q7Z5A9 133 aa10.41□□□□□ -0.74
MDC1-206ENST00000489540 PRR26Q8N8Z3 221 aa10.41□□□□□ -0.74
MDC1-206ENST00000489540 UQCR10Q9UDW1 63 aa10.41□□□□□ -0.74
MDC1-206ENST00000489540 HSBP1L1C9JCN9 74 aa10.41□□□□□ -0.74
MDC1-206ENST00000489540 M0R143 59 aa10.41□□□□□ -0.74
MDC1-206ENST00000489540 NCR3O14931 201 aa10.41□□□□□ -0.74
MDC1-206ENST00000489540 ADAMTSL4-AS1Q5T5F5 129 aa10.41□□□□□ -0.74
MDC1-206ENST00000489540 TRBV10-2A0A0K0K1G8 114 aa10.4□□□□□ -0.75
MDC1-206ENST00000489540 ZNF815PA8K554 130 aa10.4□□□□□ -0.75
MDC1-206ENST00000489540 TIMM17BO60830 172 aa10.4□□□□□ -0.75
MDC1-206ENST00000489540 NDUFC2O95298 119 aa10.39□□□□□ -0.75
MDC1-206ENST00000489540 KCNQ1DNQ9H478 68 aa10.39□□□□□ -0.75
MDC1-206ENST00000489540 PRYO14603 147 aa10.38□□□□□ -0.75
MDC1-206ENST00000489540 RPL13AP40429 203 aaKnown RBP10.38□□□□□ -0.75
MDC1-206ENST00000489540 PRLHP81277 87 aa10.38□□□□□ -0.75
MDC1-206ENST00000489540 SPANXB1Q9NS25 103 aaPredicted RBP10.38□□□□□ -0.75
MDC1-206ENST00000489540 TMEM238LA0A1B0GVL6 79 aa10.37□□□□□ -0.75
MDC1-206ENST00000489540 ATOH7Q8N100 152 aa10.37□□□□□ -0.75
MDC1-206ENST00000489540 TRBV10-3A0A0K0K1G6 114 aa10.36□□□□□ -0.75
MDC1-206ENST00000489540 LITAFQ99732 161 aa10.36□□□□□ -0.75
MDC1-206ENST00000489540 NPC2P61916 151 aa10.35□□□□□ -0.75
MDC1-206ENST00000489540 ANKRD39Q53RE8 183 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms